RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 MPZL3Q6UWV2 235 aa12.37□□□□□ -0.43
RAB5C-208ENST00000551338 PLEKHH3Q7Z736 793 aa12.37□□□□□ -0.43
RAB5C-208ENST00000551338 DAAM2Q86T65 1068 aa12.37□□□□□ -0.43
RAB5C-208ENST00000551338 IFNLR1Q8IU57 520 aaPredicted RBP12.37□□□□□ -0.43
RAB5C-208ENST00000551338 WDR49Q8IV35 697 aa12.37□□□□□ -0.43
RAB5C-208ENST00000551338 RASGEF1CQ8N431 466 aa12.37□□□□□ -0.43
RAB5C-208ENST00000551338 UBR7Q8N806 425 aa12.37□□□□□ -0.43
RAB5C-208ENST00000551338 USP38Q8NB14 1042 aa12.37□□□□□ -0.43
RAB5C-208ENST00000551338 C16orf70Q9BSU1 422 aa12.37□□□□□ -0.43
RAB5C-208ENST00000551338 UBXN6Q9BZV1 441 aa12.37□□□□□ -0.43
RAB5C-208ENST00000551338 PTPRHQ9HD43 1115 aa12.37□□□□□ -0.43
RAB5C-208ENST00000551338 DMGDHQ9UI17 866 aaKnown RBP12.37□□□□□ -0.43
RAB5C-208ENST00000551338 TMEM59LQ9UK28 342 aa12.37□□□□□ -0.43
RAB5C-208ENST00000551338 L1RE1Q9UN81 338 aa12.37□□□□□ -0.43
RAB5C-208ENST00000551338 GOLGB1Q14789 3259 aaKnown RBP12.37□□□□□ -0.43
RAB5C-208ENST00000551338 SLC15A5A6NIM6 579 aa12.36□□□□□ -0.43
RAB5C-208ENST00000551338 ASAP2O43150 1006 aa12.36□□□□□ -0.43
RAB5C-208ENST00000551338 B4GALT5O43286 388 aa12.36□□□□□ -0.43
RAB5C-208ENST00000551338 ATMINO43313 823 aaPredicted RBP12.36□□□□□ -0.43
RAB5C-208ENST00000551338 MMP3P08254 477 aa12.36□□□□□ -0.43
RAB5C-208ENST00000551338 HOXC6P09630 235 aa12.36□□□□□ -0.43
RAB5C-208ENST00000551338 MYBL2P10244 700 aa12.36□□□□□ -0.43
RAB5C-208ENST00000551338 KRT5P13647 590 aa12.36□□□□□ -0.43
RAB5C-208ENST00000551338 SMPD1P17405 629 aa12.36□□□□□ -0.43
RAB5C-208ENST00000551338 MAPK4P31152 587 aa12.36□□□□□ -0.43
RAB5C-208ENST00000551338 NOP14P78316 857 aaKnown RBP12.36□□□□□ -0.43
RAB5C-208ENST00000551338 IGBP1P78318 339 aa12.36□□□□□ -0.43
RAB5C-208ENST00000551338 GPC5P78333 572 aa12.36□□□□□ -0.43
RAB5C-208ENST00000551338 CUL2Q13617 745 aa12.36□□□□□ -0.43
RAB5C-208ENST00000551338 SURF1Q15526 300 aa12.36□□□□□ -0.43
RAB5C-208ENST00000551338 CLEC16AQ2KHT3 1053 aa12.36□□□□□ -0.43
RAB5C-208ENST00000551338 ZNF568Q3ZCX4 644 aa12.36□□□□□ -0.43
RAB5C-208ENST00000551338 ATF7IP2Q5U623 682 aa12.36□□□□□ -0.43
RAB5C-208ENST00000551338 CCDC70Q6NSX1 233 aa12.36□□□□□ -0.43
RAB5C-208ENST00000551338 C8orf74Q6P047 294 aa12.36□□□□□ -0.43
RAB5C-208ENST00000551338 TSHZ1Q6ZSZ6 1077 aa12.36□□□□□ -0.43
RAB5C-208ENST00000551338 DPP9Q86TI2 863 aa12.36□□□□□ -0.43
RAB5C-208ENST00000551338 GSPT2Q8IYD1 628 aaKnown RBP12.36□□□□□ -0.43
RAB5C-208ENST00000551338 ACTRT1Q8TDG2 376 aa12.36□□□□□ -0.43
RAB5C-208ENST00000551338 HDAC7Q8WUI4 952 aa12.36□□□□□ -0.43
RAB5C-208ENST00000551338 ZNF653Q96CK0 615 aa12.36□□□□□ -0.43
RAB5C-208ENST00000551338 NFKBIZQ9BYH8 718 aa12.36□□□□□ -0.43
RAB5C-208ENST00000551338 CDT1Q9H211 546 aa12.36□□□□□ -0.43
RAB5C-208ENST00000551338 MINDY3Q9H8M7 445 aa12.36□□□□□ -0.43
RAB5C-208ENST00000551338 CTTNBP2NLQ9P2B4 639 aa12.36□□□□□ -0.43
RAB5C-208ENST00000551338 GTF3C4Q9UKN8 822 aa12.36□□□□□ -0.43
RAB5C-208ENST00000551338 TNFSF13BQ9Y275 285 aa12.36□□□□□ -0.43
RAB5C-208ENST00000551338 NOC2LQ9Y3T9 749 aaKnown RBP12.36□□□□□ -0.43
RAB5C-208ENST00000551338 NUB1Q9Y5A7 615 aa12.36□□□□□ -0.43
RAB5C-208ENST00000551338 INO80B-WBP1J3KQ70 363 aa12.35□□□□□ -0.43
RAB5C-208ENST00000551338 MAGEB2O15479 319 aa12.35□□□□□ -0.43
RAB5C-208ENST00000551338 ADCY6O43306 1168 aa12.35□□□□□ -0.43
RAB5C-208ENST00000551338 CEP104O60308 925 aa12.35□□□□□ -0.43
RAB5C-208ENST00000551338 ZMYND10O75800 440 aa12.35□□□□□ -0.43
RAB5C-208ENST00000551338 CYP1A2P05177 515 aa12.35□□□□□ -0.43
RAB5C-208ENST00000551338 TNFRSF8P28908 595 aa12.35□□□□□ -0.43
RAB5C-208ENST00000551338 AP3M2P53677 418 aa12.35□□□□□ -0.43
RAB5C-208ENST00000551338 MRPS25P82663 173 aaKnown RBP12.35□□□□□ -0.43
RAB5C-208ENST00000551338 POU5F1BQ06416 359 aa12.35□□□□□ -0.43
RAB5C-208ENST00000551338 NCOA4Q13772 614 aa12.35□□□□□ -0.43
RAB5C-208ENST00000551338 AMHR2Q16671 573 aa12.35□□□□□ -0.43
RAB5C-208ENST00000551338 FAM187BQ17R55 369 aa12.35□□□□□ -0.43
RAB5C-208ENST00000551338 DUSP28Q4G0W2 176 aa12.35□□□□□ -0.43
RAB5C-208ENST00000551338 DCAF12L1Q5VU92 463 aa12.35□□□□□ -0.43
RAB5C-208ENST00000551338 CST9Q5W186 159 aa12.35□□□□□ -0.43
RAB5C-208ENST00000551338 ACAD10Q6JQN1 1059 aa12.35□□□□□ -0.43
RAB5C-208ENST00000551338 ILDR2Q71H61 639 aa12.35□□□□□ -0.43
RAB5C-208ENST00000551338 ZNF677Q86XU0 584 aa12.35□□□□□ -0.43
RAB5C-208ENST00000551338 RASAL3Q86YV0 1011 aa12.35□□□□□ -0.43
RAB5C-208ENST00000551338 EFCAB13Q8IY85 973 aa12.35□□□□□ -0.43
RAB5C-208ENST00000551338 MSL3Q8N5Y2 521 aaKnown RBP12.35□□□□□ -0.43
RAB5C-208ENST00000551338 CEP120Q8N960 986 aa12.35□□□□□ -0.43
RAB5C-208ENST00000551338 OR6J1Q8NGC5 347 aa12.35□□□□□ -0.43
RAB5C-208ENST00000551338 CALR3Q96L12 384 aaKnown RBP12.35□□□□□ -0.43
RAB5C-208ENST00000551338 TINF2Q9BSI4 451 aa12.35□□□□□ -0.43
RAB5C-208ENST00000551338 TCHPQ9BT92 498 aa12.35□□□□□ -0.43
RAB5C-208ENST00000551338 SELENOOQ9BVL4 669 aa12.35□□□□□ -0.43
RAB5C-208ENST00000551338 INO80BQ9C086 356 aaPredicted RBP12.35□□□□□ -0.43
RAB5C-208ENST00000551338 PRMT7Q9NVM4 692 aaPredicted RBP12.35□□□□□ -0.43
RAB5C-208ENST00000551338 ZHX1Q9UKY1 873 aaPredicted RBP12.35□□□□□ -0.43
RAB5C-208ENST00000551338 CNTN6Q9UQ52 1028 aa12.35□□□□□ -0.43
RAB5C-208ENST00000551338 A0A087WZ62 844 aa12.34□□□□□ -0.43
RAB5C-208ENST00000551338 PGRMC1O00264 195 aaKnown RBP12.34□□□□□ -0.43
RAB5C-208ENST00000551338 PHACTR2O75167 634 aa12.34□□□□□ -0.43
RAB5C-208ENST00000551338 ASS1P00966 412 aaKnown RBP12.34□□□□□ -0.43
RAB5C-208ENST00000551338 CYP1A1P04798 512 aaPredicted RBP12.34□□□□□ -0.43
RAB5C-208ENST00000551338 IQCF3P0C7M6 154 aa12.34□□□□□ -0.43
RAB5C-208ENST00000551338 UNGP13051 313 aaPredicted RBP12.34□□□□□ -0.43
RAB5C-208ENST00000551338 TBXAS1P24557 533 aaPredicted RBP12.34□□□□□ -0.43
RAB5C-208ENST00000551338 PHKA2P46019 1235 aa12.34□□□□□ -0.43
RAB5C-208ENST00000551338 RNASE9P60153 205 aaKnown RBP12.34□□□□□ -0.43
RAB5C-208ENST00000551338 TNNC1P63316 161 aa12.34□□□□□ -0.43
RAB5C-208ENST00000551338 SLC7A5Q01650 507 aa12.34□□□□□ -0.43
RAB5C-208ENST00000551338 ACVR2BQ13705 512 aa12.34□□□□□ -0.43
RAB5C-208ENST00000551338 MAP9Q49MG5 647 aa12.34□□□□□ -0.43
RAB5C-208ENST00000551338 GLE1Q53GS7 698 aaKnown RBP12.34□□□□□ -0.43
RAB5C-208ENST00000551338 MORN1Q5T089 497 aa12.34□□□□□ -0.43
RAB5C-208ENST00000551338 MTHFD1LQ6UB35 978 aa12.34□□□□□ -0.43
RAB5C-208ENST00000551338 CCNI2Q6ZMN8 369 aaPredicted RBP12.34□□□□□ -0.43
RAB5C-208ENST00000551338 HDXQ7Z353 690 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms