RNA–Protein interactions for RNA: ENST00000551293.1

RPAP3-207, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 1 (best)

Gene RPAP3, Length 621 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-207ENST00000551293 FOSBP53539 338 aa20.51■□□□□ 0.87
RPAP3-207ENST00000551293 ARPP19P56211 112 aa20.51■□□□□ 0.87
RPAP3-207ENST00000551293 ELAVL2Q12926 359 aaKnown RBP20.51■□□□□ 0.87
RPAP3-207ENST00000551293 PRPF4BQ13523 1007 aaKnown RBP20.51■□□□□ 0.87
RPAP3-207ENST00000551293 CALCRLQ16602 461 aa20.51■□□□□ 0.87
RPAP3-207ENST00000551293 CENPQQ7L2Z9 268 aaPredicted RBP20.51■□□□□ 0.87
RPAP3-207ENST00000551293 ZBTB8OSQ8IWT0 167 aa20.51■□□□□ 0.87
RPAP3-207ENST00000551293 BSNDQ8WZ55 320 aa20.51■□□□□ 0.87
RPAP3-207ENST00000551293 NELL1Q92832 810 aa20.51■□□□□ 0.87
RPAP3-207ENST00000551293 TCEAL4Q96EI5 215 aa20.51■□□□□ 0.87
RPAP3-207ENST00000551293 FZD8Q9H461 694 aa20.51■□□□□ 0.87
RPAP3-207ENST00000551293 TTC12Q9H892 705 aaPredicted RBP20.51■□□□□ 0.87
RPAP3-207ENST00000551293 MTRRQ9UBK8 725 aa20.51■□□□□ 0.87
RPAP3-207ENST00000551293 GMEB2Q9UKD1 530 aa20.51■□□□□ 0.87
RPAP3-207ENST00000551293 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.51■□□□□ 0.87
RPAP3-207ENST00000551293 NOTCH4Q99466 2003 aa20.51■□□□□ 0.87
RPAP3-207ENST00000551293 ZFHX4Q86UP3 3567 aa20.5■□□□□ 0.87
RPAP3-207ENST00000551293 ZMYM2Q9UBW7 1377 aa20.5■□□□□ 0.87
RPAP3-207ENST00000551293 PRR5-ARHGAP8B1AHC4 643 aa20.5■□□□□ 0.87
RPAP3-207ENST00000551293 N4BP3O15049 544 aa20.5■□□□□ 0.87
RPAP3-207ENST00000551293 SDHBP21912 280 aa20.5■□□□□ 0.87
RPAP3-207ENST00000551293 KCNA4P22459 653 aa20.5■□□□□ 0.87
RPAP3-207ENST00000551293 MAGEA9P43362 315 aa20.5■□□□□ 0.87
RPAP3-207ENST00000551293 ARHGAP8P85298 464 aa20.5■□□□□ 0.87
RPAP3-207ENST00000551293 ADCY1Q08828 1119 aa20.5■□□□□ 0.87
RPAP3-207ENST00000551293 UVSSAQ2YD98 709 aa20.5■□□□□ 0.87
RPAP3-207ENST00000551293 PDXDC1Q6P996 788 aa20.5■□□□□ 0.87
RPAP3-207ENST00000551293 PPP4R3CPQ6ZMV5 832 aa20.5■□□□□ 0.87
RPAP3-207ENST00000551293 PRR23BQ6ZRT6 265 aa20.5■□□□□ 0.87
RPAP3-207ENST00000551293 FAM177A1Q8N128 213 aaPredicted RBP20.5■□□□□ 0.87
RPAP3-207ENST00000551293 NELL2Q99435 816 aa20.5■□□□□ 0.87
RPAP3-207ENST00000551293 CORO1BQ9BR76 489 aa20.5■□□□□ 0.87
RPAP3-207ENST00000551293 BRD9Q9H8M2 597 aa20.5■□□□□ 0.87
RPAP3-207ENST00000551293 PDRG1Q9NUG6 133 aa20.5■□□□□ 0.87
RPAP3-207ENST00000551293 VWA8A3KMH1 1905 aa20.49■□□□□ 0.87
RPAP3-207ENST00000551293 TBC1D4O60343 1298 aa20.49■□□□□ 0.87
RPAP3-207ENST00000551293 PRKCBP05771 671 aa20.49■□□□□ 0.87
RPAP3-207ENST00000551293 XBP1P17861 261 aa20.49■□□□□ 0.87
RPAP3-207ENST00000551293 ATP2B1P20020 1258 aa20.49■□□□□ 0.87
RPAP3-207ENST00000551293 RPS9P46781 194 aaKnown RBP20.49■□□□□ 0.87
RPAP3-207ENST00000551293 FAM78AQ5JUQ0 283 aa20.49■□□□□ 0.87
RPAP3-207ENST00000551293 CD300LGQ6UXG3 332 aa20.49■□□□□ 0.87
RPAP3-207ENST00000551293 C3orf58Q8NDZ4 430 aa20.49■□□□□ 0.87
RPAP3-207ENST00000551293 DDX27Q96GQ7 796 aaKnown RBP20.49■□□□□ 0.87
RPAP3-207ENST00000551293 RTKNQ9BST9 563 aa20.49■□□□□ 0.87
RPAP3-207ENST00000551293 KIFC3Q9BVG8 833 aa20.49■□□□□ 0.87
RPAP3-207ENST00000551293 MRPS17Q9Y2R5 130 aaKnown RBP20.49■□□□□ 0.87
RPAP3-207ENST00000551293 PRRG1O14668 218 aa20.48■□□□□ 0.87
RPAP3-207ENST00000551293 CDKL5O76039 1030 aa20.48■□□□□ 0.87
RPAP3-207ENST00000551293 REC8O95072 547 aa20.48■□□□□ 0.87
RPAP3-207ENST00000551293 LRG1P02750 347 aa20.48■□□□□ 0.87
RPAP3-207ENST00000551293 POU2F2P09086 479 aa20.48■□□□□ 0.87
RPAP3-207ENST00000551293 FCARP24071 287 aa20.48■□□□□ 0.87
RPAP3-207ENST00000551293 CDCA2Q69YH5 1023 aaPredicted RBP20.48■□□□□ 0.87
RPAP3-207ENST00000551293 ELSPBP1Q96BH3 223 aa20.48■□□□□ 0.87
RPAP3-207ENST00000551293 PRIMPOLQ96LW4 560 aa20.48■□□□□ 0.87
RPAP3-207ENST00000551293 GDE1Q9NZC3 331 aa20.48■□□□□ 0.87
RPAP3-207ENST00000551293 RAB23Q9ULC3 237 aa20.48■□□□□ 0.87
RPAP3-207ENST00000551293 CHD8Q9HCK8 2581 aa20.48■□□□□ 0.87
RPAP3-207ENST00000551293 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.47■□□□□ 0.87
RPAP3-207ENST00000551293 TDGF1P13385 188 aa20.47■□□□□ 0.87
RPAP3-207ENST00000551293 PTPN2P17706 415 aa20.47■□□□□ 0.87
RPAP3-207ENST00000551293 KRT2P35908 639 aa20.47■□□□□ 0.87
RPAP3-207ENST00000551293 ROR1Q01973 937 aa20.47■□□□□ 0.87
RPAP3-207ENST00000551293 MAPK6Q16659 721 aa20.47■□□□□ 0.87
RPAP3-207ENST00000551293 ST3GAL2Q16842 350 aa20.47■□□□□ 0.87
RPAP3-207ENST00000551293 BORCS6Q96GS4 357 aa20.47■□□□□ 0.87
RPAP3-207ENST00000551293 ZSWIM3Q96MP5 696 aa20.47■□□□□ 0.87
RPAP3-207ENST00000551293 ADPGKQ9BRR6 497 aa20.47■□□□□ 0.87
RPAP3-207ENST00000551293 LMAN1LQ9HAT1 526 aa20.47■□□□□ 0.87
RPAP3-207ENST00000551293 ORC3Q9UBD5 711 aaPredicted RBP20.47■□□□□ 0.87
RPAP3-207ENST00000551293 CTDNEP1O95476 244 aa20.46■□□□□ 0.87
RPAP3-207ENST00000551293 SPATA31C1P0DKV0 1188 aa20.46■□□□□ 0.87
RPAP3-207ENST00000551293 GJA1P17302 382 aa20.46■□□□□ 0.87
RPAP3-207ENST00000551293 GDI1P31150 447 aa20.46■□□□□ 0.87
RPAP3-207ENST00000551293 ELF1P32519 619 aa20.46■□□□□ 0.87
RPAP3-207ENST00000551293 CCR2P41597 374 aa20.46■□□□□ 0.87
RPAP3-207ENST00000551293 SRSF5Q13243 272 aaKnown RBP20.46■□□□□ 0.87
RPAP3-207ENST00000551293 FAM187BQ17R55 369 aa20.46■□□□□ 0.87
RPAP3-207ENST00000551293 PPM1JQ5JR12 505 aa20.46■□□□□ 0.87
RPAP3-207ENST00000551293 HS6ST3Q8IZP7 471 aa20.46■□□□□ 0.87
RPAP3-207ENST00000551293 ZNF687Q8N1G0 1237 aa20.46■□□□□ 0.87
RPAP3-207ENST00000551293 TNFRSF25Q93038 417 aa20.46■□□□□ 0.87
RPAP3-207ENST00000551293 PPP1R10Q96QC0 940 aaKnown RBP20.46■□□□□ 0.87
RPAP3-207ENST00000551293 TRMT61BQ9BVS5 477 aaKnown RBP20.46■□□□□ 0.87
RPAP3-207ENST00000551293 CHRDQ9H2X0 955 aa20.46■□□□□ 0.87
RPAP3-207ENST00000551293 CYP4F11Q9HBI6 524 aa20.46■□□□□ 0.87
RPAP3-207ENST00000551293 TPCN1Q9ULQ1 816 aa20.46■□□□□ 0.87
RPAP3-207ENST00000551293 BACE2Q9Y5Z0 518 aa20.46■□□□□ 0.87
RPAP3-207ENST00000551293 STK36Q9NRP7 1315 aa20.46■□□□□ 0.87
RPAP3-207ENST00000551293 WDR27A2RRH5 827 aa20.45■□□□□ 0.86
RPAP3-207ENST00000551293 NEMFO60524 1076 aa20.45■□□□□ 0.86
RPAP3-207ENST00000551293 MED24O75448 989 aa20.45■□□□□ 0.86
RPAP3-207ENST00000551293 SEC24AO95486 1093 aa20.45■□□□□ 0.86
RPAP3-207ENST00000551293 VIPR2P41587 438 aa20.45■□□□□ 0.86
RPAP3-207ENST00000551293 OSTNP61366 133 aa20.45■□□□□ 0.86
RPAP3-207ENST00000551293 SATB1Q01826 763 aa20.45■□□□□ 0.86
RPAP3-207ENST00000551293 SOX4Q06945 474 aaPredicted RBP20.45■□□□□ 0.86
RPAP3-207ENST00000551293 DMWDQ09019 674 aa20.45■□□□□ 0.86
RPAP3-207ENST00000551293 UPP1Q16831 310 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms