RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 ZNF233A6NK53 670 aa17.63■□□□□ 0.41
CHMP1A-209ENST00000550872 EXOC3O60645 756 aa17.63■□□□□ 0.41
CHMP1A-209ENST00000550872 LPXNO60711 386 aa17.63■□□□□ 0.41
CHMP1A-209ENST00000550872 PLCB3Q01970 1234 aa17.63■□□□□ 0.41
CHMP1A-209ENST00000550872 MORC3Q14149 939 aa17.63■□□□□ 0.41
CHMP1A-209ENST00000550872 ADGRE1Q14246 886 aa17.63■□□□□ 0.41
CHMP1A-209ENST00000550872 COBLL1Q53SF7 1204 aa17.63■□□□□ 0.41
CHMP1A-209ENST00000550872 BRSK2Q8IWQ3 736 aa17.63■□□□□ 0.41
CHMP1A-209ENST00000550872 C12orf56Q8IXR9 622 aa17.63■□□□□ 0.41
CHMP1A-209ENST00000550872 RDH13Q8NBN7 331 aa17.63■□□□□ 0.41
CHMP1A-209ENST00000550872 RABGGTAQ92696 567 aa17.63■□□□□ 0.41
CHMP1A-209ENST00000550872 IGSF21Q96ID5 467 aa17.63■□□□□ 0.41
CHMP1A-209ENST00000550872 TSPAN18Q96SJ8 248 aa17.63■□□□□ 0.41
CHMP1A-209ENST00000550872 ASB7Q9H672 318 aa17.63■□□□□ 0.41
CHMP1A-209ENST00000550872 CACNG4Q9UBN1 327 aa17.63■□□□□ 0.41
CHMP1A-209ENST00000550872 PUF60Q9UHX1 559 aaKnown RBP17.63■□□□□ 0.41
CHMP1A-209ENST00000550872 TRAF3IP3Q9Y228 551 aa17.63■□□□□ 0.41
CHMP1A-209ENST00000550872 IL18RAPO95256 599 aa17.62■□□□□ 0.41
CHMP1A-209ENST00000550872 NR3C1P04150 777 aa17.62■□□□□ 0.41
CHMP1A-209ENST00000550872 STIM1Q13586 685 aa17.62■□□□□ 0.41
CHMP1A-209ENST00000550872 HSP90AA2PQ14568 343 aaPredicted RBP17.62■□□□□ 0.41
CHMP1A-209ENST00000550872 PTPROQ16827 1216 aa17.62■□□□□ 0.41
CHMP1A-209ENST00000550872 JADE1Q6IE81 842 aa17.62■□□□□ 0.41
CHMP1A-209ENST00000550872 TMEM173Q86WV6 379 aaPredicted RBP17.62■□□□□ 0.41
CHMP1A-209ENST00000550872 CBWD2Q8IUF1 395 aa17.62■□□□□ 0.41
CHMP1A-209ENST00000550872 ADSSL1Q8N142 457 aa17.62■□□□□ 0.41
CHMP1A-209ENST00000550872 TRIML1Q8N9V2 468 aa17.62■□□□□ 0.41
CHMP1A-209ENST00000550872 BCL7CQ8WUZ0 217 aaPredicted RBP17.62■□□□□ 0.41
CHMP1A-209ENST00000550872 POF1BQ8WVV4 589 aa17.62■□□□□ 0.41
CHMP1A-209ENST00000550872 C18orf25Q96B23 403 aaPredicted RBP17.62■□□□□ 0.41
CHMP1A-209ENST00000550872 LMAN2LQ9H0V9 348 aa17.62■□□□□ 0.41
CHMP1A-209ENST00000550872 GOLGA2P5Q9HBQ8 144 aa17.62■□□□□ 0.41
CHMP1A-209ENST00000550872 RBAKQ9NYW8 714 aaPredicted RBP17.62■□□□□ 0.41
CHMP1A-209ENST00000550872 UBQLN1Q9UMX0 589 aaKnown RBP17.62■□□□□ 0.41
CHMP1A-209ENST00000550872 XPOTO43592 962 aaKnown RBP17.61■□□□□ 0.41
CHMP1A-209ENST00000550872 CSPG5O95196 566 aa17.61■□□□□ 0.41
CHMP1A-209ENST00000550872 FOSL2P15408 326 aa17.61■□□□□ 0.41
CHMP1A-209ENST00000550872 BMP6P22004 513 aa17.61■□□□□ 0.41
CHMP1A-209ENST00000550872 PPP1R2P41236 205 aa17.61■□□□□ 0.41
CHMP1A-209ENST00000550872 UBE3AQ05086 875 aa17.61■□□□□ 0.41
CHMP1A-209ENST00000550872 SOX4Q06945 474 aaPredicted RBP17.61■□□□□ 0.41
CHMP1A-209ENST00000550872 TMEM132DQ14C87 1099 aa17.61■□□□□ 0.41
CHMP1A-209ENST00000550872 ZBTB6Q15916 424 aa17.61■□□□□ 0.41
CHMP1A-209ENST00000550872 SLC9A9Q8IVB4 645 aa17.61■□□□□ 0.41
CHMP1A-209ENST00000550872 DDX27Q96GQ7 796 aaKnown RBP17.61■□□□□ 0.41
CHMP1A-209ENST00000550872 FBXL18Q96ME1 805 aa17.61■□□□□ 0.41
CHMP1A-209ENST00000550872 UROC1Q96N76 676 aa17.61■□□□□ 0.41
CHMP1A-209ENST00000550872 PAAF1Q9BRP4 392 aa17.61■□□□□ 0.41
CHMP1A-209ENST00000550872 DMAC2Q9NW81 257 aa17.61■□□□□ 0.41
CHMP1A-209ENST00000550872 LZTS1Q9Y250 596 aa17.61■□□□□ 0.41
CHMP1A-209ENST00000550872 PRRC2BQ5JSZ5 2229 aaKnown RBP17.61■□□□□ 0.41
CHMP1A-209ENST00000550872 SPTBN5Q9NRC6 3674 aaKnown RBP17.6■□□□□ 0.41
CHMP1A-209ENST00000550872 F8W810 466 aa17.6■□□□□ 0.41
CHMP1A-209ENST00000550872 PSMA7O14818 248 aa17.6■□□□□ 0.41
CHMP1A-209ENST00000550872 TADA2AO75478 443 aa17.6■□□□□ 0.41
CHMP1A-209ENST00000550872 NFICP08651 508 aa17.6■□□□□ 0.41
CHMP1A-209ENST00000550872 CD44P16070 742 aaKnown RBP17.6■□□□□ 0.41
CHMP1A-209ENST00000550872 CYP3A5P20815 502 aa17.6■□□□□ 0.41
CHMP1A-209ENST00000550872 DNAJB1P25685 340 aa17.6■□□□□ 0.41
CHMP1A-209ENST00000550872 RPL13P26373 211 aaKnown RBP17.6■□□□□ 0.41
CHMP1A-209ENST00000550872 WNT7BP56706 349 aa17.6■□□□□ 0.41
CHMP1A-209ENST00000550872 MYBPC2Q14324 1141 aa17.6■□□□□ 0.41
CHMP1A-209ENST00000550872 SNRNP35Q16560 246 aaKnown RBP17.6■□□□□ 0.41
CHMP1A-209ENST00000550872 CENPPQ6IPU0 288 aa17.6■□□□□ 0.41
CHMP1A-209ENST00000550872 KLHL10Q6JEL2 608 aa17.6■□□□□ 0.41
CHMP1A-209ENST00000550872 DCLRE1AQ6PJP8 1040 aa17.6■□□□□ 0.41
CHMP1A-209ENST00000550872 DDX53Q86TM3 631 aaKnown RBP17.6■□□□□ 0.41
CHMP1A-209ENST00000550872 BEST2Q8NFU1 509 aa17.6■□□□□ 0.41
CHMP1A-209ENST00000550872 MICAL1Q8TDZ2 1067 aa17.6■□□□□ 0.41
CHMP1A-209ENST00000550872 MRPL38Q96DV4 380 aaKnown RBP17.6■□□□□ 0.41
CHMP1A-209ENST00000550872 DHTKD1Q96HY7 919 aaPredicted RBP17.6■□□□□ 0.41
CHMP1A-209ENST00000550872 TSG101Q99816 390 aa17.6■□□□□ 0.41
CHMP1A-209ENST00000550872 COL25A1Q9BXS0 654 aaPredicted RBP17.6■□□□□ 0.41
CHMP1A-209ENST00000550872 PDE11AQ9HCR9 933 aa17.6■□□□□ 0.41
CHMP1A-209ENST00000550872 MARCH5Q9NX47 278 aa17.6■□□□□ 0.41
CHMP1A-209ENST00000550872 LMCD1Q9NZU5 365 aa17.6■□□□□ 0.41
CHMP1A-209ENST00000550872 TUBGCP4Q9UGJ1 667 aa17.6■□□□□ 0.41
CHMP1A-209ENST00000550872 DERAQ9Y315 318 aa17.6■□□□□ 0.41
CHMP1A-209ENST00000550872 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.6■□□□□ 0.41
CHMP1A-209ENST00000550872 MTCH2Q9Y6C9 303 aa17.6■□□□□ 0.41
CHMP1A-209ENST00000550872 PRUNE2Q8WUY3 3088 aa17.6■□□□□ 0.41
CHMP1A-209ENST00000550872 PPP1R3GB7ZBB8 358 aa17.59■□□□□ 0.41
CHMP1A-209ENST00000550872 B3GAT3O94766 335 aa17.59■□□□□ 0.41
CHMP1A-209ENST00000550872 POU3F3P20264 500 aaPredicted RBP17.59■□□□□ 0.41
CHMP1A-209ENST00000550872 NR2F2P24468 414 aa17.59■□□□□ 0.41
CHMP1A-209ENST00000550872 RPL9P32969 192 aaKnown RBP17.59■□□□□ 0.41
CHMP1A-209ENST00000550872 CLCNKBP51801 687 aa17.59■□□□□ 0.41
CHMP1A-209ENST00000550872 GUCY2FP51841 1108 aa17.59■□□□□ 0.41
CHMP1A-209ENST00000550872 ADAM9Q13443 819 aa17.59■□□□□ 0.41
CHMP1A-209ENST00000550872 SURF1Q15526 300 aa17.59■□□□□ 0.41
CHMP1A-209ENST00000550872 EDRF1Q3B7T1 1238 aa17.59■□□□□ 0.41
CHMP1A-209ENST00000550872 ZCWPW2Q504Y3 356 aa17.59■□□□□ 0.41
CHMP1A-209ENST00000550872 CEP135Q66GS9 1140 aa17.59■□□□□ 0.41
CHMP1A-209ENST00000550872 NT5DC4Q86YG4 428 aa17.59■□□□□ 0.41
CHMP1A-209ENST00000550872 TMEM174Q8WUU8 243 aa17.59■□□□□ 0.41
CHMP1A-209ENST00000550872 TLR9Q9NR96 1032 aa17.59■□□□□ 0.41
CHMP1A-209ENST00000550872 ADAM28Q9UKQ2 775 aa17.59■□□□□ 0.41
CHMP1A-209ENST00000550872 FRMD4BQ9Y2L6 1034 aa17.59■□□□□ 0.41
CHMP1A-209ENST00000550872 C2CD2Q9Y426 696 aa17.59■□□□□ 0.41
CHMP1A-209ENST00000550872 PDCD11Q14690 1871 aaKnown RBP17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms