RNA–Protein interactions for RNA: ENST00000550790.1

PACS2-210, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 3

Gene PACS2, Length 1,163 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-210ENST00000550790 TMX3Q96JJ7 454 aa23.34■■□□□ 1.33
PACS2-210ENST00000550790 ZMAT2Q96NC0 199 aaKnown RBP23.34■■□□□ 1.33
PACS2-210ENST00000550790 TIPINQ9BVW5 301 aa23.34■■□□□ 1.33
PACS2-210ENST00000550790 MRPL4Q9BYD3 311 aaKnown RBP23.34■■□□□ 1.33
PACS2-210ENST00000550790 GOLGA2P5Q9HBQ8 144 aa23.34■■□□□ 1.33
PACS2-210ENST00000550790 KMT5AQ9NQR1 393 aa23.34■■□□□ 1.33
PACS2-210ENST00000550790 BACE2Q9Y5Z0 518 aa23.34■■□□□ 1.33
PACS2-210ENST00000550790 ZFP37Q9Y6Q3 630 aaPredicted RBP23.34■■□□□ 1.33
PACS2-210ENST00000550790 DOCK6Q96HP0 2047 aa23.33■■□□□ 1.33
PACS2-210ENST00000550790 PTPRZ1P23471 2315 aaPredicted RBP23.33■■□□□ 1.33
PACS2-210ENST00000550790 SFI1A8K8P3 1242 aa23.33■■□□□ 1.33
PACS2-210ENST00000550790 C8AP07357 584 aa23.33■■□□□ 1.33
PACS2-210ENST00000550790 POU2F2P09086 479 aa23.33■■□□□ 1.33
PACS2-210ENST00000550790 MCF2P10911 925 aa23.33■■□□□ 1.33
PACS2-210ENST00000550790 SRFP11831 508 aa23.33■■□□□ 1.33
PACS2-210ENST00000550790 KCNE1P15382 129 aa23.33■■□□□ 1.33
PACS2-210ENST00000550790 DMP1Q13316 513 aaPredicted RBP23.33■■□□□ 1.33
PACS2-210ENST00000550790 HTR4Q13639 388 aa23.33■■□□□ 1.33
PACS2-210ENST00000550790 UVSSAQ2YD98 709 aa23.33■■□□□ 1.33
PACS2-210ENST00000550790 SPIRE2Q8WWL2 714 aa23.33■■□□□ 1.33
PACS2-210ENST00000550790 CCDC94Q9BW85 323 aaPredicted RBP23.33■■□□□ 1.33
PACS2-210ENST00000550790 FBXL21Q9UKT6 434 aa23.33■■□□□ 1.33
PACS2-210ENST00000550790 KIF3AQ9Y496 699 aa23.33■■□□□ 1.33
PACS2-210ENST00000550790 VWA8A3KMH1 1905 aa23.33■■□□□ 1.32
PACS2-210ENST00000550790 SLC16A4O15374 487 aa23.32■■□□□ 1.32
PACS2-210ENST00000550790 CD2BP2O95400 341 aaKnown RBP23.32■■□□□ 1.32
PACS2-210ENST00000550790 CFHP08603 1231 aa23.32■■□□□ 1.32
PACS2-210ENST00000550790 FSHRP23945 695 aa23.32■■□□□ 1.32
PACS2-210ENST00000550790 NTHL1P78549 312 aa23.32■■□□□ 1.32
PACS2-210ENST00000550790 PPM1LQ5SGD2 360 aa23.32■■□□□ 1.32
PACS2-210ENST00000550790 AXDND1Q5T1B0 1012 aaPredicted RBP23.32■■□□□ 1.32
PACS2-210ENST00000550790 MCTP1Q6DN14 999 aa23.32■■□□□ 1.32
PACS2-210ENST00000550790 RTL10Q7L3V2 364 aa23.32■■□□□ 1.32
PACS2-210ENST00000550790 GET4Q7L5D6 327 aaPredicted RBP23.32■■□□□ 1.32
PACS2-210ENST00000550790 SYT2Q8N9I0 419 aaPredicted RBP23.32■■□□□ 1.32
PACS2-210ENST00000550790 DDX27Q96GQ7 796 aaKnown RBP23.32■■□□□ 1.32
PACS2-210ENST00000550790 RTP3Q9BQQ7 232 aa23.32■■□□□ 1.32
PACS2-210ENST00000550790 TOPORSQ9NS56 1045 aaPredicted RBP23.32■■□□□ 1.32
PACS2-210ENST00000550790 TRAPPC3O43617 180 aa23.31■■□□□ 1.32
PACS2-210ENST00000550790 TKTP29401 623 aaKnown RBP23.31■■□□□ 1.32
PACS2-210ENST00000550790 NBL1P41271 181 aa23.31■■□□□ 1.32
PACS2-210ENST00000550790 BRCC3P46736 316 aa23.31■■□□□ 1.32
PACS2-210ENST00000550790 YARSP54577 528 aaKnown RBP23.31■■□□□ 1.32
PACS2-210ENST00000550790 SLC12A3P55017 1021 aa23.31■■□□□ 1.32
PACS2-210ENST00000550790 OSTNP61366 133 aa23.31■■□□□ 1.32
PACS2-210ENST00000550790 ZNF568Q3ZCX4 644 aa23.31■■□□□ 1.32
PACS2-210ENST00000550790 LIN9Q5TKA1 542 aa23.31■■□□□ 1.32
PACS2-210ENST00000550790 MPZL3Q6UWV2 235 aa23.31■■□□□ 1.32
PACS2-210ENST00000550790 TMEM161BQ8NDZ6 487 aa23.31■■□□□ 1.32
PACS2-210ENST00000550790 ZBTB45Q96K62 511 aaPredicted RBP23.31■■□□□ 1.32
PACS2-210ENST00000550790 SNX27Q96L92 541 aa23.31■■□□□ 1.32
PACS2-210ENST00000550790 ACAP3Q96P50 834 aa23.31■■□□□ 1.32
PACS2-210ENST00000550790 RPP25Q9BUL9 199 aaKnown RBP23.31■■□□□ 1.32
PACS2-210ENST00000550790 CNTN3Q9P232 1028 aa23.31■■□□□ 1.32
PACS2-210ENST00000550790 CDH7Q9ULB5 785 aa23.31■■□□□ 1.32
PACS2-210ENST00000550790 TRIP11Q15643 1979 aa23.31■■□□□ 1.32
PACS2-210ENST00000550790 I3L4J1 428 aa23.3■■□□□ 1.32
PACS2-210ENST00000550790 ST18O60284 1047 aa23.3■■□□□ 1.32
PACS2-210ENST00000550790 TBC1D4O60343 1298 aa23.3■■□□□ 1.32
PACS2-210ENST00000550790 PLS3P13797 630 aa23.3■■□□□ 1.32
PACS2-210ENST00000550790 ARSHQ5FYA8 562 aa23.3■■□□□ 1.32
PACS2-210ENST00000550790 ARL6IP4Q66PJ3 421 aaKnown RBP23.3■■□□□ 1.32
PACS2-210ENST00000550790 ANKS3Q6ZW76 656 aa23.3■■□□□ 1.32
PACS2-210ENST00000550790 CCDC105Q8IYK2 499 aa23.3■■□□□ 1.32
PACS2-210ENST00000550790 SLC7A14Q8TBB6 771 aa23.3■■□□□ 1.32
PACS2-210ENST00000550790 SLC2A4RGQ9NR83 387 aa23.3■■□□□ 1.32
PACS2-210ENST00000550790 SLC38A7Q9NVC3 462 aa23.3■■□□□ 1.32
PACS2-210ENST00000550790 KCNG1Q9UIX4 513 aa23.3■■□□□ 1.32
PACS2-210ENST00000550790 CDY1Q9Y6F8 540 aa23.3■■□□□ 1.32
PACS2-210ENST00000550790 NUMBLQ9Y6R0 609 aa23.3■■□□□ 1.32
PACS2-210ENST00000550790 CCL16O15467 120 aa23.29■■□□□ 1.32
PACS2-210ENST00000550790 GFRA3O60609 400 aa23.29■■□□□ 1.32
PACS2-210ENST00000550790 MAPTP10636 758 aaKnown RBP23.29■■□□□ 1.32
PACS2-210ENST00000550790 GJB2P29033 226 aa23.29■■□□□ 1.32
PACS2-210ENST00000550790 MRPL58Q14197 206 aaKnown RBP23.29■■□□□ 1.32
PACS2-210ENST00000550790 SLC8B1Q6J4K2 584 aa23.29■■□□□ 1.32
PACS2-210ENST00000550790 DTWD2Q8NBA8 298 aa23.29■■□□□ 1.32
PACS2-210ENST00000550790 ITFG1Q8TB96 612 aa23.29■■□□□ 1.32
PACS2-210ENST00000550790 GPR152Q8TDT2 470 aa23.29■■□□□ 1.32
PACS2-210ENST00000550790 FGF13Q92913 245 aa23.29■■□□□ 1.32
PACS2-210ENST00000550790 KCNN1Q92952 543 aa23.29■■□□□ 1.32
PACS2-210ENST00000550790 TCHPQ9BT92 498 aa23.29■■□□□ 1.32
PACS2-210ENST00000550790 XYLBO75191 536 aa23.28■■□□□ 1.32
PACS2-210ENST00000550790 TOM1L1O75674 476 aa23.28■■□□□ 1.32
PACS2-210ENST00000550790 ABLIM3O94929 683 aa23.28■■□□□ 1.32
PACS2-210ENST00000550790 RPL9P32969 192 aaKnown RBP23.28■■□□□ 1.32
PACS2-210ENST00000550790 SLC10A6Q3KNW5 377 aa23.28■■□□□ 1.32
PACS2-210ENST00000550790 TMEM119Q4V9L6 283 aa23.28■■□□□ 1.32
PACS2-210ENST00000550790 PARM1Q6UWI2 310 aa23.28■■□□□ 1.32
PACS2-210ENST00000550790 ST13P5Q8NFI4 369 aaPredicted RBP23.28■■□□□ 1.32
PACS2-210ENST00000550790 FGF14Q92915 247 aa23.28■■□□□ 1.32
PACS2-210ENST00000550790 C18orf25Q96B23 403 aaPredicted RBP23.28■■□□□ 1.32
PACS2-210ENST00000550790 PLIN2Q99541 437 aa23.28■■□□□ 1.32
PACS2-210ENST00000550790 KCND2Q9NZV8 630 aa23.28■■□□□ 1.32
PACS2-210ENST00000550790 DNMT3BQ9UBC3 853 aaKnown RBP23.28■■□□□ 1.32
PACS2-210ENST00000550790 VWA3AA6NCI4 1184 aa23.27■■□□□ 1.32
PACS2-210ENST00000550790 PODXLO00592 558 aa23.27■■□□□ 1.32
PACS2-210ENST00000550790 PLA2G4BP0C869 781 aa23.27■■□□□ 1.32
PACS2-210ENST00000550790 RAD51AP2Q09MP3 1159 aa23.27■■□□□ 1.32
PACS2-210ENST00000550790 ZRSR1Q15695 479 aaKnown RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms