RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 HELQQ8TDG4 1101 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 ZMAT2Q96NC0 199 aaKnown RBP11.14□□□□□ -0.63
RAB5C-207ENST00000550504 RPS6KC1Q96S38 1066 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 GAD1Q99259 594 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 LBHD1Q9BQE6 289 aaPredicted RBP11.14□□□□□ -0.63
RAB5C-207ENST00000550504 MTMR12Q9C0I1 747 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 ASB7Q9H672 318 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 RSAD1Q9HA92 442 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 PLEKHA5Q9HAU0 1116 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 RTN4Q9NQC3 1192 aaKnown RBP11.14□□□□□ -0.63
RAB5C-207ENST00000550504 INTS13Q9NVM9 706 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 LRFN2Q9ULH4 789 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 INPP5FQ9Y2H2 1132 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 GIT1Q9Y2X7 761 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 PCDHB7Q9Y5E2 793 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 NR2E3Q9Y5X4 410 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 ANK1P16157 1881 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 CUL9Q8IWT3 2517 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 CITO14578 2027 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 MICAL3Q7RTP6 2002 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 RALGAPA2Q2PPJ7 1873 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 SMIM28A0A1B0GU29 152 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 ABHD14A-ACY1A0A1B0GW23 586 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 ARL5CA6NH57 179 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 ZBBXA8MT70 800 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 PHACTR2O75167 634 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 UPP2O95045 317 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 ADCY5O95622 1261 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 EOMESO95936 686 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 TNNC2P02585 160 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 FGBP02675 491 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 MXI1P50539 228 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 SCNN1GP51170 649 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 GUCY2FP51841 1108 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 CLDN10P78369 228 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 DEFB103AP81534 67 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 MYL7Q01449 175 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 POU5F1Q01860 360 aaKnown RBP11.13□□□□□ -0.63
RAB5C-207ENST00000550504 ENPEPQ07075 957 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 BIRC3Q13489 604 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 NR1I3Q14994 352 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 DUOXA2Q1HG44 320 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 ALKAL1Q6UXT8 129 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 FAM43BQ6ZT52 329 aaPredicted RBP11.13□□□□□ -0.63
RAB5C-207ENST00000550504 SV2AQ7L0J3 742 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 C18orf25Q96B23 403 aaPredicted RBP11.13□□□□□ -0.63
RAB5C-207ENST00000550504 ANKRD36BP1Q96IX9 119 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 CRACR2AQ9BSW2 395 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 TMEM117Q9H0C3 514 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 ELAC1Q9H777 363 aaKnown RBP11.13□□□□□ -0.63
RAB5C-207ENST00000550504 TMEM8AQ9HCN3 771 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 UBN1Q9NPG3 1134 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 TMEM161AQ9NX61 479 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 CNTN3Q9P232 1028 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 PLAGL2Q9UPG8 496 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 LAMA3Q16787 3333 aa11.13□□□□□ -0.63
RAB5C-207ENST00000550504 TRIP11Q15643 1979 aa11.12□□□□□ -0.63
RAB5C-207ENST00000550504 PTGESO14684 152 aa11.12□□□□□ -0.63
RAB5C-207ENST00000550504 N4BP1O75113 896 aaKnown RBP11.12□□□□□ -0.63
RAB5C-207ENST00000550504 OFD1O75665 1012 aa11.12□□□□□ -0.63
RAB5C-207ENST00000550504 CLSTN1O94985 981 aa11.12□□□□□ -0.63
RAB5C-207ENST00000550504 POMCP01189 267 aa11.12□□□□□ -0.63
RAB5C-207ENST00000550504 AMHP03971 560 aa11.12□□□□□ -0.63
RAB5C-207ENST00000550504 C4BPAP04003 597 aaKnown RBP11.12□□□□□ -0.63
RAB5C-207ENST00000550504 TPM3P06753 285 aa11.12□□□□□ -0.63
RAB5C-207ENST00000550504 GTF2H1P32780 548 aa11.12□□□□□ -0.63
RAB5C-207ENST00000550504 KCNJ6P48051 423 aa11.12□□□□□ -0.63
RAB5C-207ENST00000550504 KLK7P49862 253 aa11.12□□□□□ -0.63
RAB5C-207ENST00000550504 GATMP50440 423 aa11.12□□□□□ -0.63
RAB5C-207ENST00000550504 MCCD1P59942 119 aaPredicted RBP11.12□□□□□ -0.63
RAB5C-207ENST00000550504 WDR5P61964 334 aaKnown RBP11.12□□□□□ -0.63
RAB5C-207ENST00000550504 XKR4Q5GH76 650 aa11.12□□□□□ -0.63
RAB5C-207ENST00000550504 CLLU1OSQ5K130 101 aa11.12□□□□□ -0.63
RAB5C-207ENST00000550504 TMEM240Q5SV17 173 aa11.12□□□□□ -0.63
RAB5C-207ENST00000550504 TDRD10Q5VZ19 366 aaKnown RBP11.12□□□□□ -0.63
RAB5C-207ENST00000550504 KRT39Q6A163 491 aa11.12□□□□□ -0.63
RAB5C-207ENST00000550504 SCARA3Q6AZY7 606 aa11.12□□□□□ -0.63
RAB5C-207ENST00000550504 FAM117BQ6P1L5 589 aa11.12□□□□□ -0.63
RAB5C-207ENST00000550504 PSRC1Q6PGN9 363 aaPredicted RBP11.12□□□□□ -0.63
RAB5C-207ENST00000550504 GLB1LQ6UWU2 654 aa11.12□□□□□ -0.63
RAB5C-207ENST00000550504 TRAPPC11Q7Z392 1133 aa11.12□□□□□ -0.63
RAB5C-207ENST00000550504 TMCO2Q7Z6W1 182 aaPredicted RBP11.12□□□□□ -0.63
RAB5C-207ENST00000550504 NPAS4Q8IUM7 802 aa11.12□□□□□ -0.63
RAB5C-207ENST00000550504 CACTINQ8WUQ7 758 aaKnown RBP11.12□□□□□ -0.63
RAB5C-207ENST00000550504 PCMTD1Q96MG8 357 aaPredicted RBP11.12□□□□□ -0.63
RAB5C-207ENST00000550504 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.12□□□□□ -0.633e-6■■■■□ 22.3
RAB5C-207ENST00000550504 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.12□□□□□ -0.63
RAB5C-207ENST00000550504 MIOSQ9NXC5 875 aa11.12□□□□□ -0.63
RAB5C-207ENST00000550504 GCNT4Q9P109 453 aa11.12□□□□□ -0.63
RAB5C-207ENST00000550504 TUBGCP4Q9UGJ1 667 aa11.12□□□□□ -0.63
RAB5C-207ENST00000550504 EFCAB14O75071 495 aa11.11□□□□□ -0.63
RAB5C-207ENST00000550504 BAIAP3O94812 1187 aa11.11□□□□□ -0.63
RAB5C-207ENST00000550504 ITGB3P05106 788 aa11.11□□□□□ -0.63
RAB5C-207ENST00000550504 THP07101 528 aa11.11□□□□□ -0.63
RAB5C-207ENST00000550504 KRT19P08727 400 aa11.11□□□□□ -0.63
RAB5C-207ENST00000550504 KCNE1P15382 129 aa11.11□□□□□ -0.63
RAB5C-207ENST00000550504 PIK3CAP42336 1068 aa11.11□□□□□ -0.63
RAB5C-207ENST00000550504 AP3M2P53677 418 aa11.11□□□□□ -0.63
RAB5C-207ENST00000550504 SOX4Q06945 474 aaPredicted RBP11.11□□□□□ -0.63
RAB5C-207ENST00000550504 SYCP1Q15431 976 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms