RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 IL18RAPO95256 599 aa14.16□□□□□ -0.14
RAB5C-206ENST00000550406 DNAJB2P25686 324 aa14.16□□□□□ -0.14
RAB5C-206ENST00000550406 RPL13P26373 211 aaKnown RBP14.16□□□□□ -0.14
RAB5C-206ENST00000550406 ERCC5P28715 1186 aaPredicted RBP14.16□□□□□ -0.14
RAB5C-206ENST00000550406 PBX3P40426 434 aa14.16□□□□□ -0.14
RAB5C-206ENST00000550406 GUCY2FP51841 1108 aa14.16□□□□□ -0.14
RAB5C-206ENST00000550406 FKBP3Q00688 224 aaKnown RBP14.16□□□□□ -0.14
RAB5C-206ENST00000550406 PPP2R3AQ06190 1150 aa14.16□□□□□ -0.14
RAB5C-206ENST00000550406 PSMD6Q15008 389 aa14.16□□□□□ -0.14
RAB5C-206ENST00000550406 RAB30Q15771 203 aa14.16□□□□□ -0.14
RAB5C-206ENST00000550406 CT47A1Q5JQC4 288 aaPredicted RBP14.16□□□□□ -0.14
RAB5C-206ENST00000550406 IRF2BP1Q8IU81 584 aa14.16□□□□□ -0.14
RAB5C-206ENST00000550406 CD302Q8IX05 232 aa14.16□□□□□ -0.14
RAB5C-206ENST00000550406 LRRC43Q8N309 656 aa14.16□□□□□ -0.14
RAB5C-206ENST00000550406 PARD3BQ8TEW8 1205 aa14.16□□□□□ -0.14
RAB5C-206ENST00000550406 ZNF516Q92618 1163 aa14.16□□□□□ -0.14
RAB5C-206ENST00000550406 RABGGTAQ92696 567 aa14.16□□□□□ -0.14
RAB5C-206ENST00000550406 RPS6KC1Q96S38 1066 aa14.16□□□□□ -0.14
RAB5C-206ENST00000550406 POP1Q99575 1024 aaKnown RBP14.16□□□□□ -0.14
RAB5C-206ENST00000550406 C17orf80Q9BSJ5 609 aa14.16□□□□□ -0.14
RAB5C-206ENST00000550406 SRRTQ9BXP5 876 aaKnown RBP14.16□□□□□ -0.14
RAB5C-206ENST00000550406 MRPL9Q9BYD2 267 aaKnown RBP14.16□□□□□ -0.14
RAB5C-206ENST00000550406 ASB7Q9H672 318 aa14.16□□□□□ -0.14
RAB5C-206ENST00000550406 GOLGA2P5Q9HBQ8 144 aa14.16□□□□□ -0.14
RAB5C-206ENST00000550406 TUBGCP4Q9UGJ1 667 aa14.16□□□□□ -0.14
RAB5C-206ENST00000550406 F8W810 466 aa14.15□□□□□ -0.14
RAB5C-206ENST00000550406 GALTP07902 379 aa14.15□□□□□ -0.14
RAB5C-206ENST00000550406 SLC11A1P49279 550 aa14.15□□□□□ -0.14
RAB5C-206ENST00000550406 BCAR1P56945 870 aa14.15□□□□□ -0.14
RAB5C-206ENST00000550406 DLG4P78352 724 aa14.15□□□□□ -0.14
RAB5C-206ENST00000550406 TUSC3Q13454 348 aa14.15□□□□□ -0.14
RAB5C-206ENST00000550406 ANO6Q4KMQ2 910 aa14.15□□□□□ -0.14
RAB5C-206ENST00000550406 HABP4Q5JVS0 413 aaKnown RBP14.15□□□□□ -0.14
RAB5C-206ENST00000550406 LMBRD2Q68DH5 695 aaPredicted RBP14.15□□□□□ -0.14
RAB5C-206ENST00000550406 CD300LGQ6UXG3 332 aa14.15□□□□□ -0.14
RAB5C-206ENST00000550406 FILIP1Q7Z7B0 1213 aa14.15□□□□□ -0.14
RAB5C-206ENST00000550406 FAM186BQ8IYM0 893 aa14.15□□□□□ -0.14
RAB5C-206ENST00000550406 CSGALNACT2Q8N6G5 542 aa14.15□□□□□ -0.14
RAB5C-206ENST00000550406 COLGALT1Q8NBJ5 622 aa14.15□□□□□ -0.14
RAB5C-206ENST00000550406 OR5B17Q8NGF7 314 aa14.15□□□□□ -0.14
RAB5C-206ENST00000550406 RSPH1Q8WYR4 309 aa14.15□□□□□ -0.14
RAB5C-206ENST00000550406 TIFAQ96CG3 184 aa14.15□□□□□ -0.14
RAB5C-206ENST00000550406 KIF12Q96FN5 646 aa14.15□□□□□ -0.14
RAB5C-206ENST00000550406 LRCH3Q96II8 777 aa14.15□□□□□ -0.14
RAB5C-206ENST00000550406 CEP63Q96MT8 703 aa14.15□□□□□ -0.14
RAB5C-206ENST00000550406 MKNK1Q9BUB5 465 aa14.15□□□□□ -0.14
RAB5C-206ENST00000550406 DACH1Q9UI36 760 aa14.15□□□□□ -0.14
RAB5C-206ENST00000550406 DERAQ9Y315 318 aa14.15□□□□□ -0.14
RAB5C-206ENST00000550406 C2CD2Q9Y426 696 aa14.15□□□□□ -0.14
RAB5C-206ENST00000550406 VWA8A3KMH1 1905 aa14.14□□□□□ -0.15
RAB5C-206ENST00000550406 CASTOR2A6NHX0 329 aa14.14□□□□□ -0.15
RAB5C-206ENST00000550406 NT5C1B-RDH14C9J2C7 533 aa14.14□□□□□ -0.15
RAB5C-206ENST00000550406 NRP1O14786 923 aa14.14□□□□□ -0.15
RAB5C-206ENST00000550406 PSMC2P35998 433 aaKnown RBP14.14□□□□□ -0.15
RAB5C-206ENST00000550406 BMPR1AP36894 532 aa14.14□□□□□ -0.15
RAB5C-206ENST00000550406 ERVK-21P61565 698 aa14.14□□□□□ -0.15
RAB5C-206ENST00000550406 CLDN10P78369 228 aa14.14□□□□□ -0.15
RAB5C-206ENST00000550406 RNASELQ05823 741 aaKnown RBP14.14□□□□□ -0.15
RAB5C-206ENST00000550406 TMEM132DQ14C87 1099 aa14.14□□□□□ -0.15
RAB5C-206ENST00000550406 SPATA1Q5VX52 437 aa14.14□□□□□ -0.15
RAB5C-206ENST00000550406 KCNT2Q6UVM3 1135 aa14.14□□□□□ -0.15
RAB5C-206ENST00000550406 TMEM173Q86WV6 379 aaPredicted RBP14.14□□□□□ -0.15
RAB5C-206ENST00000550406 CXorf38Q8TB03 319 aa14.14□□□□□ -0.15
RAB5C-206ENST00000550406 ENOX1Q8TC92 643 aaKnown RBP14.14□□□□□ -0.15
RAB5C-206ENST00000550406 BCL7CQ8WUZ0 217 aaPredicted RBP14.14□□□□□ -0.15
RAB5C-206ENST00000550406 CCDC127Q96BQ5 260 aa14.14□□□□□ -0.15
RAB5C-206ENST00000550406 TSPAN18Q96SJ8 248 aa14.14□□□□□ -0.15
RAB5C-206ENST00000550406 CGRRF1Q99675 332 aa14.14□□□□□ -0.15
RAB5C-206ENST00000550406 INTS13Q9NVM9 706 aa14.14□□□□□ -0.15
RAB5C-206ENST00000550406 MARCH5Q9NX47 278 aa14.14□□□□□ -0.15
RAB5C-206ENST00000550406 FRMD4BQ9Y2L6 1034 aa14.14□□□□□ -0.15
RAB5C-206ENST00000550406 COL4A4P53420 1690 aaPredicted RBP14.14□□□□□ -0.15
RAB5C-206ENST00000550406 EPOPA6NHQ4 379 aa14.13□□□□□ -0.15
RAB5C-206ENST00000550406 LRRIQ3A6PVS8 624 aaPredicted RBP14.13□□□□□ -0.15
RAB5C-206ENST00000550406 PPEF2O14830 753 aa14.13□□□□□ -0.15
RAB5C-206ENST00000550406 SLC16A3O15427 465 aaKnown RBP14.13□□□□□ -0.15
RAB5C-206ENST00000550406 ZC3H11AO75152 810 aaKnown RBP eCLIP14.13□□□□□ -0.15
RAB5C-206ENST00000550406 ITGB1P05556 798 aa14.13□□□□□ -0.15
RAB5C-206ENST00000550406 CCDC192P0DO97 292 aa14.13□□□□□ -0.15
RAB5C-206ENST00000550406 CYP3A5P20815 502 aa14.13□□□□□ -0.15
RAB5C-206ENST00000550406 CLCNKBP51801 687 aa14.13□□□□□ -0.15
RAB5C-206ENST00000550406 NCAPHQ15003 741 aa14.13□□□□□ -0.15
RAB5C-206ENST00000550406 SURF1Q15526 300 aa14.13□□□□□ -0.15
RAB5C-206ENST00000550406 EPC2Q52LR7 807 aa14.13□□□□□ -0.15
RAB5C-206ENST00000550406 SLC39A11Q8N1S5 342 aa14.13□□□□□ -0.15
RAB5C-206ENST00000550406 C3orf58Q8NDZ4 430 aa14.13□□□□□ -0.15
RAB5C-206ENST00000550406 TMC2Q8TDI7 906 aa14.13□□□□□ -0.15
RAB5C-206ENST00000550406 FAM193BQ96PV7 902 aaPredicted RBP14.13□□□□□ -0.15
RAB5C-206ENST00000550406 TMEM175Q9BSA9 504 aa14.13□□□□□ -0.15
RAB5C-206ENST00000550406 TTYH1Q9H313 450 aaPredicted RBP14.13□□□□□ -0.15
RAB5C-206ENST00000550406 CERS4Q9HA82 394 aa14.13□□□□□ -0.15
RAB5C-206ENST00000550406 UBQLN1Q9UMX0 589 aaKnown RBP14.13□□□□□ -0.15
RAB5C-206ENST00000550406 MYO9BQ13459 2157 aa14.12□□□□□ -0.15
RAB5C-206ENST00000550406 CHD9Q3L8U1 2897 aa14.12□□□□□ -0.15
RAB5C-206ENST00000550406 ANO9A1A5B4 782 aa14.12□□□□□ -0.15
RAB5C-206ENST00000550406 C5orf67F2Z3F1 127 aa14.12□□□□□ -0.15
RAB5C-206ENST00000550406 EFEMP2O95967 443 aa14.12□□□□□ -0.15
RAB5C-206ENST00000550406 C4BPAP04003 597 aaKnown RBP14.12□□□□□ -0.15
RAB5C-206ENST00000550406 ALDH2P05091 517 aa14.12□□□□□ -0.15
RAB5C-206ENST00000550406 TRIM49P0CI25 452 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms