RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 ST13P5Q8NFI4 369 aaPredicted RBP14.71□□□□□ -0.05
NUP188-211ENST00000550219 TTPALQ9BTX7 342 aa14.71□□□□□ -0.05
NUP188-211ENST00000550219 MMTAG2Q9BU76 263 aaKnown RBP14.71□□□□□ -0.05
NUP188-211ENST00000550219 CCSER1Q9C0I3 900 aa14.71□□□□□ -0.05
NUP188-211ENST00000550219 NT5C3AQ9H0P0 336 aa14.71□□□□□ -0.05
NUP188-211ENST00000550219 LMBRD1Q9NUN5 540 aa14.71□□□□□ -0.05
NUP188-211ENST00000550219 ZDHHC7Q9NXF8 308 aa14.71□□□□□ -0.05
NUP188-211ENST00000550219 STK24Q9Y6E0 443 aa14.71□□□□□ -0.05
NUP188-211ENST00000550219 HIP1RO75146 1068 aa14.7□□□□□ -0.06
NUP188-211ENST00000550219 PRPF40AO75400 957 aaKnown RBP14.7□□□□□ -0.06
NUP188-211ENST00000550219 HARSP12081 509 aaKnown RBP14.7□□□□□ -0.06
NUP188-211ENST00000550219 CDC25AP30304 524 aa14.7□□□□□ -0.06
NUP188-211ENST00000550219 MCM4P33991 863 aa14.7□□□□□ -0.06
NUP188-211ENST00000550219 EFNA5P52803 228 aa14.7□□□□□ -0.06
NUP188-211ENST00000550219 OSTNP61366 133 aa14.7□□□□□ -0.06
NUP188-211ENST00000550219 ZNF568Q3ZCX4 644 aa14.7□□□□□ -0.06
NUP188-211ENST00000550219 KRT79Q5XKE5 535 aa14.7□□□□□ -0.06
NUP188-211ENST00000550219 CYP26C1Q6V0L0 522 aa14.7□□□□□ -0.06
NUP188-211ENST00000550219 USP49Q70CQ1 688 aa14.7□□□□□ -0.06
NUP188-211ENST00000550219 APBB1IPQ7Z5R6 666 aaPredicted RBP14.7□□□□□ -0.06
NUP188-211ENST00000550219 SIX5Q8N196 739 aa14.7□□□□□ -0.06
NUP188-211ENST00000550219 CEP120Q8N960 986 aa14.7□□□□□ -0.06
NUP188-211ENST00000550219 HDAC7Q8WUI4 952 aa14.7□□□□□ -0.06
NUP188-211ENST00000550219 PIK3R5Q8WYR1 880 aa14.7□□□□□ -0.06
NUP188-211ENST00000550219 PRKD2Q9BZL6 878 aa14.7□□□□□ -0.06
NUP188-211ENST00000550219 GOLGA2P5Q9HBQ8 144 aa14.7□□□□□ -0.06
NUP188-211ENST00000550219 IGSF9Q9P2J2 1179 aa14.7□□□□□ -0.06
NUP188-211ENST00000550219 FBXW11Q9UKB1 542 aa14.7□□□□□ -0.06
NUP188-211ENST00000550219 POLIQ9UNA4 740 aa14.7□□□□□ -0.06
NUP188-211ENST00000550219 WDFY4Q6ZS81 3184 aa14.7□□□□□ -0.06
NUP188-211ENST00000550219 GOLGA6L22H0YM25 854 aa14.69□□□□□ -0.06
NUP188-211ENST00000550219 K7ERI5 159 aa14.69□□□□□ -0.06
NUP188-211ENST00000550219 GFRA3O60609 400 aa14.69□□□□□ -0.06
NUP188-211ENST00000550219 GADD45BO75293 160 aaPredicted RBP14.69□□□□□ -0.06
NUP188-211ENST00000550219 ZMYND10O75800 440 aa14.69□□□□□ -0.06
NUP188-211ENST00000550219 C8AP07357 584 aa14.69□□□□□ -0.06
NUP188-211ENST00000550219 UBE2HP62256 183 aa14.69□□□□□ -0.06
NUP188-211ENST00000550219 ELAVL2Q12926 359 aaKnown RBP14.69□□□□□ -0.06
NUP188-211ENST00000550219 DMP1Q13316 513 aaPredicted RBP14.69□□□□□ -0.06
NUP188-211ENST00000550219 NAB2Q15742 525 aa14.69□□□□□ -0.06
NUP188-211ENST00000550219 SPECC1Q5M775 1068 aa14.69□□□□□ -0.06
NUP188-211ENST00000550219 PPM1LQ5SGD2 360 aa14.69□□□□□ -0.06
NUP188-211ENST00000550219 HYIQ5T013 277 aa14.69□□□□□ -0.06
NUP188-211ENST00000550219 LILRA6Q6PI73 481 aa14.69□□□□□ -0.06
NUP188-211ENST00000550219 GRASPQ7Z6J2 395 aaPredicted RBP14.69□□□□□ -0.06
NUP188-211ENST00000550219 GPR65Q8IYL9 337 aa14.69□□□□□ -0.06
NUP188-211ENST00000550219 LNX1Q8TBB1 728 aaPredicted RBP14.69□□□□□ -0.06
NUP188-211ENST00000550219 EPSTI1Q96J88 318 aa14.69□□□□□ -0.06
NUP188-211ENST00000550219 RUSC1Q9BVN2 902 aa14.69□□□□□ -0.06
NUP188-211ENST00000550219 IRF2BPLQ9H1B7 796 aa14.69□□□□□ -0.06
NUP188-211ENST00000550219 CDT1Q9H211 546 aa14.69□□□□□ -0.06
NUP188-211ENST00000550219 KMT5AQ9NQR1 393 aa14.69□□□□□ -0.06
NUP188-211ENST00000550219 CA14Q9ULX7 337 aa14.69□□□□□ -0.06
NUP188-211ENST00000550219 DNM3Q9UQ16 869 aa14.69□□□□□ -0.06
NUP188-211ENST00000550219 HPSEQ9Y251 543 aa14.69□□□□□ -0.06
NUP188-211ENST00000550219 I3L4J1 428 aa14.68□□□□□ -0.06
NUP188-211ENST00000550219 STK25O00506 426 aa14.68□□□□□ -0.06
NUP188-211ENST00000550219 CCL16O15467 120 aa14.68□□□□□ -0.06
NUP188-211ENST00000550219 ADAM12O43184 909 aa14.68□□□□□ -0.06
NUP188-211ENST00000550219 B3GAT3O94766 335 aa14.68□□□□□ -0.06
NUP188-211ENST00000550219 UBA7P41226 1012 aa14.68□□□□□ -0.06
NUP188-211ENST00000550219 NPTX2P47972 431 aa14.68□□□□□ -0.06
NUP188-211ENST00000550219 CLCNKBP51801 687 aa14.68□□□□□ -0.06
NUP188-211ENST00000550219 YARSP54577 528 aaKnown RBP14.68□□□□□ -0.06
NUP188-211ENST00000550219 NTHL1P78549 312 aa14.68□□□□□ -0.06
NUP188-211ENST00000550219 RAD51AP2Q09MP3 1159 aa14.68□□□□□ -0.06
NUP188-211ENST00000550219 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.68□□□□□ -0.06
NUP188-211ENST00000550219 KCNK18Q7Z418 384 aa14.68□□□□□ -0.06
NUP188-211ENST00000550219 DAW1Q8N136 415 aa14.68□□□□□ -0.06
NUP188-211ENST00000550219 KCTD17Q8N5Z5 321 aa14.68□□□□□ -0.06
NUP188-211ENST00000550219 SLC7A14Q8TBB6 771 aa14.68□□□□□ -0.06
NUP188-211ENST00000550219 DRC1Q96MC2 740 aa14.68□□□□□ -0.06
NUP188-211ENST00000550219 CLSTN3Q9BQT9 956 aa14.68□□□□□ -0.06
NUP188-211ENST00000550219 CCDC94Q9BW85 323 aaPredicted RBP14.68□□□□□ -0.06
NUP188-211ENST00000550219 TARS2Q9BW92 718 aaKnown RBP14.68□□□□□ -0.06
NUP188-211ENST00000550219 RHOBTB2Q9BYZ6 727 aa14.68□□□□□ -0.06
NUP188-211ENST00000550219 EPS15L1Q9UBC2 864 aa14.68□□□□□ -0.06
NUP188-211ENST00000550219 TNFSF13BQ9Y275 285 aa14.68□□□□□ -0.06
NUP188-211ENST00000550219 ZDBF2Q9HCK1 2354 aa14.68□□□□□ -0.06
NUP188-211ENST00000550219 GOLGA6L4A6NEF3 574 aa14.67□□□□□ -0.06
NUP188-211ENST00000550219 FSHRP23945 695 aa14.67□□□□□ -0.06
NUP188-211ENST00000550219 IGFBP6P24592 240 aaPredicted RBP14.67□□□□□ -0.06
NUP188-211ENST00000550219 TKTP29401 623 aaKnown RBP14.67□□□□□ -0.06
NUP188-211ENST00000550219 BRCC3P46736 316 aa14.67□□□□□ -0.06
NUP188-211ENST00000550219 CLCN5P51795 746 aa14.67□□□□□ -0.06
NUP188-211ENST00000550219 NUBP1P53384 320 aa14.67□□□□□ -0.06
NUP188-211ENST00000550219 PDXDC1Q6P996 788 aa14.67□□□□□ -0.06
NUP188-211ENST00000550219 C3orf58Q8NDZ4 430 aa14.67□□□□□ -0.06
NUP188-211ENST00000550219 PPP1R10Q96QC0 940 aaKnown RBP14.67□□□□□ -0.06
NUP188-211ENST00000550219 PLIN2Q99541 437 aa14.67□□□□□ -0.06
NUP188-211ENST00000550219 MRPL4Q9BYD3 311 aaKnown RBP14.67□□□□□ -0.06
NUP188-211ENST00000550219 GOLPH3LQ9H4A5 285 aa14.67□□□□□ -0.06
NUP188-211ENST00000550219 FAM13BQ9NYF5 915 aa14.67□□□□□ -0.06
NUP188-211ENST00000550219 ANKFY1Q9P2R3 1169 aa14.67□□□□□ -0.06
NUP188-211ENST00000550219 NUMBLQ9Y6R0 609 aa14.67□□□□□ -0.06
NUP188-211ENST00000550219 MYO10Q9HD67 2058 aa14.67□□□□□ -0.06
NUP188-211ENST00000550219 SFI1A8K8P3 1242 aa14.66□□□□□ -0.06
NUP188-211ENST00000550219 SLC16A4O15374 487 aa14.66□□□□□ -0.06
NUP188-211ENST00000550219 PI15O43692 258 aa14.66□□□□□ -0.06
NUP188-211ENST00000550219 C1RP00736 705 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms