RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 ASB14A6NK59 587 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 DAPK3O43293 454 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 THAP12O43422 761 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 ZEB2O60315 1214 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 PPFIA2O75334 1257 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 ECEL1O95672 775 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 LSM8O95777 96 aaKnown RBP9.56□□□□□ -0.88
TMEM116-209ENST00000550020 GAS8O95995 478 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 CLTAP09496 248 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 FAM153BP0C7A2 387 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 UNGP13051 313 aaPredicted RBP9.56□□□□□ -0.88
TMEM116-209ENST00000550020 ITGA4P13612 1032 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 TCF7P36402 384 aaPredicted RBP9.56□□□□□ -0.88
TMEM116-209ENST00000550020 HSD17B3P37058 310 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 PEX5P50542 639 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 IRAK1P51617 712 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 MRPS25P82663 173 aaKnown RBP9.56□□□□□ -0.88
TMEM116-209ENST00000550020 CENPCQ03188 943 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 LMNB2Q03252 620 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 C1QBPQ07021 282 aaKnown RBP9.56□□□□□ -0.88
TMEM116-209ENST00000550020 CALCOCO2Q13137 446 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 R3HDM1Q15032 1099 aaKnown RBP9.56□□□□□ -0.88
TMEM116-209ENST00000550020 MAPK6Q16659 721 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 SGSM1Q2NKQ1 1148 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 FAM153CQ494X1 144 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 DNAJC21Q5F1R6 531 aaKnown RBP9.56□□□□□ -0.88
TMEM116-209ENST00000550020 PRAMEF18Q5VWM3 479 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 DUPD1Q68J44 220 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 MICALCLQ6ZW33 695 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 B4GALNT4Q76KP1 1039 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 TAS1R3Q7RTX0 852 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 PALB2Q86YC2 1186 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 PHF13Q86YI8 300 aaPredicted RBP9.56□□□□□ -0.88
TMEM116-209ENST00000550020 SLC13A5Q86YT5 568 aaPredicted RBP9.56□□□□□ -0.88
TMEM116-209ENST00000550020 JAMLQ86YT9 394 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 BRSK2Q8IWQ3 736 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 MCOLN2Q8IZK6 566 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 SHCBP1Q8NEM2 672 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 CCHCR1Q8TD31 782 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 ASAP3Q8TDY4 903 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 ATP8B4Q8TF62 1192 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 ZC3H15Q8WU90 426 aaKnown RBP9.56□□□□□ -0.88
TMEM116-209ENST00000550020 UBLCP1Q8WVY7 318 aaPredicted RBP9.56□□□□□ -0.88
TMEM116-209ENST00000550020 RIN2Q8WYP3 895 aaPredicted RBP9.56□□□□□ -0.88
TMEM116-209ENST00000550020 DDX1Q92499 740 aaKnown RBP9.56□□□□□ -0.88
TMEM116-209ENST00000550020 ALG3Q92685 438 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 GLG1Q92896 1179 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 SLCO2A1Q92959 643 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 KAT5Q92993 513 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 CD101Q93033 1021 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 POP1Q99575 1024 aaKnown RBP9.56□□□□□ -0.88
TMEM116-209ENST00000550020 HINFPQ9BQA5 517 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 TCHPQ9BT92 498 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 ZNF518BQ9C0D4 1074 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 SMARCAD1Q9H4L7 1026 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 TMBIM4Q9HC24 238 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 ANKFY1Q9P2R3 1169 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 FAM153AQ9UHL3 310 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 CNTN6Q9UQ52 1028 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 CEP83Q9Y592 693 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 PCDHB4Q9Y5E5 795 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 PARP14Q460N5 1801 aa9.56□□□□□ -0.88
TMEM116-209ENST00000550020 SOWAHBA6NEL2 793 aa9.55□□□□□ -0.88
TMEM116-209ENST00000550020 ZSCAN5CA6NGD5 496 aaPredicted RBP9.55□□□□□ -0.88
TMEM116-209ENST00000550020 SPDYE5A6NIY4 337 aa9.55□□□□□ -0.88
TMEM116-209ENST00000550020 UNCXA6NJT0 531 aa9.55□□□□□ -0.88
TMEM116-209ENST00000550020 EBAG9O00559 213 aa9.55□□□□□ -0.88
TMEM116-209ENST00000550020 FSCN2O14926 492 aa9.55□□□□□ -0.88
TMEM116-209ENST00000550020 OGTO15294 1046 aa9.55□□□□□ -0.88
TMEM116-209ENST00000550020 EIF3HO15372 352 aaKnown RBP eCLIP9.55□□□□□ -0.88
TMEM116-209ENST00000550020 PSTPIP1O43586 416 aa9.55□□□□□ -0.88
TMEM116-209ENST00000550020 LGR5O75473 907 aa9.55□□□□□ -0.88
TMEM116-209ENST00000550020 IL18RAPO95256 599 aa9.55□□□□□ -0.88
TMEM116-209ENST00000550020 TNNC2P02585 160 aa9.55□□□□□ -0.88
TMEM116-209ENST00000550020 CYP1A1P04798 512 aaPredicted RBP9.55□□□□□ -0.88
TMEM116-209ENST00000550020 CALB1P05937 261 aa9.55□□□□□ -0.88
TMEM116-209ENST00000550020 NR1D1P20393 614 aa9.55□□□□□ -0.88
TMEM116-209ENST00000550020 NLRP11P59045 1033 aaKnown RBP9.55□□□□□ -0.88
TMEM116-209ENST00000550020 GNGT1P63211 74 aa9.55□□□□□ -0.88
TMEM116-209ENST00000550020 CCNA1P78396 465 aa9.55□□□□□ -0.88
TMEM116-209ENST00000550020 SP2Q02086 613 aa9.55□□□□□ -0.88
TMEM116-209ENST00000550020 CNTN2Q02246 1040 aa9.55□□□□□ -0.88
TMEM116-209ENST00000550020 DHX9Q08211 1270 aaKnown RBP9.55□□□□□ -0.88
TMEM116-209ENST00000550020 PPIL2Q13356 520 aa9.55□□□□□ -0.88
TMEM116-209ENST00000550020 TRPC3Q13507 836 aa9.55□□□□□ -0.88
TMEM116-209ENST00000550020 NCOA4Q13772 614 aa9.55□□□□□ -0.88
TMEM116-209ENST00000550020 PTPROQ16827 1216 aa9.55□□□□□ -0.88
TMEM116-209ENST00000550020 DUOXA2Q1HG44 320 aa9.55□□□□□ -0.88
TMEM116-209ENST00000550020 DCAF12L1Q5VU92 463 aa9.55□□□□□ -0.88
TMEM116-209ENST00000550020 TDRD10Q5VZ19 366 aaKnown RBP9.55□□□□□ -0.88
TMEM116-209ENST00000550020 DENND2CQ68D51 928 aa9.55□□□□□ -0.88
TMEM116-209ENST00000550020 CDCA2Q69YH5 1023 aaPredicted RBP9.55□□□□□ -0.88
TMEM116-209ENST00000550020 CCDC137Q6PK04 289 aaKnown RBP9.55□□□□□ -0.88
TMEM116-209ENST00000550020 ARMC9Q7Z3E5 817 aa9.55□□□□□ -0.88
TMEM116-209ENST00000550020 TMC3Q7Z5M5 1100 aa9.55□□□□□ -0.88
TMEM116-209ENST00000550020 DNAAF5Q86Y56 855 aa9.55□□□□□ -0.88
TMEM116-209ENST00000550020 RHOT1Q8IXI2 618 aa9.55□□□□□ -0.88
TMEM116-209ENST00000550020 DHX37Q8IY37 1157 aaKnown RBP9.55□□□□□ -0.88
TMEM116-209ENST00000550020 CCDC105Q8IYK2 499 aa9.55□□□□□ -0.88
TMEM116-209ENST00000550020 ABRAQ8N0Z2 381 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms