RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 SOX4Q06945 474 aaPredicted RBP12.96□□□□□ -0.33
PFDN5-208ENST00000549995 HSP90AA2PQ14568 343 aaPredicted RBP12.96□□□□□ -0.33
PFDN5-208ENST00000549995 UPP1Q16831 310 aa12.96□□□□□ -0.33
PFDN5-208ENST00000549995 SEZ6Q53EL9 994 aa12.96□□□□□ -0.33
PFDN5-208ENST00000549995 SPOUT1Q5T280 376 aaKnown RBP12.96□□□□□ -0.33
PFDN5-208ENST00000549995 FOXR2Q6PJQ5 311 aa12.96□□□□□ -0.33
PFDN5-208ENST00000549995 CD300LGQ6UXG3 332 aa12.96□□□□□ -0.33
PFDN5-208ENST00000549995 SYCP3Q8IZU3 236 aa12.96□□□□□ -0.33
PFDN5-208ENST00000549995 GPD1LQ8N335 351 aa12.96□□□□□ -0.33
PFDN5-208ENST00000549995 TMEM169Q96HH4 297 aa12.96□□□□□ -0.33
PFDN5-208ENST00000549995 FAM193BQ96PV7 902 aaPredicted RBP12.96□□□□□ -0.33
PFDN5-208ENST00000549995 HERC2P3Q9BVR0 1158 aa12.96□□□□□ -0.33
PFDN5-208ENST00000549995 NSUN3Q9H649 340 aaKnown RBP12.96□□□□□ -0.33
PFDN5-208ENST00000549995 KIAA1586Q9HCI6 787 aa12.96□□□□□ -0.33
PFDN5-208ENST00000549995 ALG13Q9NP73 1137 aaKnown RBP12.96□□□□□ -0.33
PFDN5-208ENST00000549995 TLR9Q9NR96 1032 aa12.96□□□□□ -0.33
PFDN5-208ENST00000549995 CHST7Q9NS84 486 aa12.96□□□□□ -0.33
PFDN5-208ENST00000549995 FAN1Q9Y2M0 1017 aa12.96□□□□□ -0.33
PFDN5-208ENST00000549995 PCDHA5Q9Y5H7 936 aa12.96□□□□□ -0.33
PFDN5-208ENST00000549995 LACTBL1A8MY62 500 aa12.95□□□□□ -0.34
PFDN5-208ENST00000549995 LILRB3O75022 631 aa12.95□□□□□ -0.34
PFDN5-208ENST00000549995 IL18RAPO95256 599 aa12.95□□□□□ -0.34
PFDN5-208ENST00000549995 SMC2O95347 1197 aa12.95□□□□□ -0.34
PFDN5-208ENST00000549995 SOD2P04179 222 aa12.95□□□□□ -0.34
PFDN5-208ENST00000549995 CTSAP10619 480 aa12.95□□□□□ -0.34
PFDN5-208ENST00000549995 RPL9P32969 192 aaKnown RBP12.95□□□□□ -0.34
PFDN5-208ENST00000549995 ERVFC1P60507 584 aa12.95□□□□□ -0.34
PFDN5-208ENST00000549995 OSTNP61366 133 aa12.95□□□□□ -0.34
PFDN5-208ENST00000549995 KRT17Q04695 432 aa12.95□□□□□ -0.34
PFDN5-208ENST00000549995 ZNF658Q5TYW1 1059 aaPredicted RBP12.95□□□□□ -0.34
PFDN5-208ENST00000549995 ARMCX5Q6P1M9 558 aa12.95□□□□□ -0.34
PFDN5-208ENST00000549995 HS2ST1Q7LGA3 356 aa12.95□□□□□ -0.34
PFDN5-208ENST00000549995 ZC3H3Q8IXZ2 948 aaKnown RBP12.95□□□□□ -0.34
PFDN5-208ENST00000549995 ZSWIM2Q8NEG5 633 aa12.95□□□□□ -0.34
PFDN5-208ENST00000549995 DDX27Q96GQ7 796 aaKnown RBP12.95□□□□□ -0.34
PFDN5-208ENST00000549995 COLEC11Q9BWP8 271 aa12.95□□□□□ -0.34
PFDN5-208ENST00000549995 RPF1Q9H9Y2 349 aaKnown RBP12.95□□□□□ -0.34
PFDN5-208ENST00000549995 NGRNQ9NPE2 291 aaKnown RBP12.95□□□□□ -0.34
PFDN5-208ENST00000549995 HSPBP1Q9NZL4 362 aa12.95□□□□□ -0.34
PFDN5-208ENST00000549995 ADAM28Q9UKQ2 775 aa12.95□□□□□ -0.34
PFDN5-208ENST00000549995 UBQLN1Q9UMX0 589 aaKnown RBP12.95□□□□□ -0.34
PFDN5-208ENST00000549995 PLXNA3P51805 1871 aa12.95□□□□□ -0.34
PFDN5-208ENST00000549995 MTCL1Q9Y4B5 1905 aaKnown RBP12.94□□□□□ -0.34
PFDN5-208ENST00000549995 FSD2A1L4K1 749 aa12.94□□□□□ -0.34
PFDN5-208ENST00000549995 NT5C1B-RDH14C9J2C7 533 aa12.94□□□□□ -0.34
PFDN5-208ENST00000549995 MAPK13O15264 365 aa12.94□□□□□ -0.34
PFDN5-208ENST00000549995 XPOTO43592 962 aaKnown RBP12.94□□□□□ -0.34
PFDN5-208ENST00000549995 KIF4AO95239 1232 aa12.94□□□□□ -0.34
PFDN5-208ENST00000549995 C1RP00736 705 aa12.94□□□□□ -0.34
PFDN5-208ENST00000549995 PAX3P23760 479 aa12.94□□□□□ -0.34
PFDN5-208ENST00000549995 IRS1P35568 1242 aa12.94□□□□□ -0.34
PFDN5-208ENST00000549995 MATR3P43243 847 aaKnown RBP eCLIP12.94□□□□□ -0.34
PFDN5-208ENST00000549995 OR1G1P47890 313 aa12.94□□□□□ -0.34
PFDN5-208ENST00000549995 AARSP49588 968 aaKnown RBP eCLIP12.94□□□□□ -0.34
PFDN5-208ENST00000549995 ACOT2P49753 483 aa12.94□□□□□ -0.34
PFDN5-208ENST00000549995 ENPEPQ07075 957 aa12.94□□□□□ -0.34
PFDN5-208ENST00000549995 KCNC3Q14003 757 aa12.94□□□□□ -0.34
PFDN5-208ENST00000549995 GLRA4Q5JXX5 417 aa12.94□□□□□ -0.34
PFDN5-208ENST00000549995 SPATA1Q5VX52 437 aa12.94□□□□□ -0.34
PFDN5-208ENST00000549995 XXYLT1Q8NBI6 393 aa12.94□□□□□ -0.34
PFDN5-208ENST00000549995 SMARCE1Q969G3 411 aa12.94□□□□□ -0.34
PFDN5-208ENST00000549995 PAAF1Q9BRP4 392 aa12.94□□□□□ -0.34
PFDN5-208ENST00000549995 CLSTN2Q9H4D0 955 aa12.94□□□□□ -0.34
PFDN5-208ENST00000549995 PUF60Q9UHX1 559 aaKnown RBP12.94□□□□□ -0.34
PFDN5-208ENST00000549995 SCN1AP35498 2009 aa12.94□□□□□ -0.34
PFDN5-208ENST00000549995 MYO7AQ13402 2215 aa12.93□□□□□ -0.34
PFDN5-208ENST00000549995 BRWD1Q9NSI6 2320 aa12.93□□□□□ -0.34
PFDN5-208ENST00000549995 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.93□□□□□ -0.34
PFDN5-208ENST00000549995 ANO9A1A5B4 782 aa12.93□□□□□ -0.34
PFDN5-208ENST00000549995 F8W810 466 aa12.93□□□□□ -0.34
PFDN5-208ENST00000549995 PPP1R2P41236 205 aa12.93□□□□□ -0.34
PFDN5-208ENST00000549995 CLCNKBP51801 687 aa12.93□□□□□ -0.34
PFDN5-208ENST00000549995 WNT7BP56706 349 aa12.93□□□□□ -0.34
PFDN5-208ENST00000549995 DSG1Q02413 1049 aa12.93□□□□□ -0.34
PFDN5-208ENST00000549995 MORC3Q14149 939 aa12.93□□□□□ -0.34
PFDN5-208ENST00000549995 PTPN14Q15678 1187 aa12.93□□□□□ -0.34
PFDN5-208ENST00000549995 CTC1Q2NKJ3 1217 aa12.93□□□□□ -0.34
PFDN5-208ENST00000549995 EDRF1Q3B7T1 1238 aa12.93□□□□□ -0.34
PFDN5-208ENST00000549995 CENPPQ6IPU0 288 aa12.93□□□□□ -0.34
PFDN5-208ENST00000549995 FUT10Q6P4F1 479 aa12.93□□□□□ -0.34
PFDN5-208ENST00000549995 DCLRE1AQ6PJP8 1040 aa12.93□□□□□ -0.34
PFDN5-208ENST00000549995 NELFCDQ8IXH7 590 aa12.93□□□□□ -0.34
PFDN5-208ENST00000549995 EFCAB13Q8IY85 973 aa12.93□□□□□ -0.34
PFDN5-208ENST00000549995 ADSSL1Q8N142 457 aa12.93□□□□□ -0.34
PFDN5-208ENST00000549995 TRIML1Q8N9V2 468 aa12.93□□□□□ -0.34
PFDN5-208ENST00000549995 C3orf58Q8NDZ4 430 aa12.93□□□□□ -0.34
PFDN5-208ENST00000549995 MAFAQ8NHW3 353 aaPredicted RBP12.93□□□□□ -0.34
PFDN5-208ENST00000549995 CXorf38Q8TB03 319 aa12.93□□□□□ -0.34
PFDN5-208ENST00000549995 C18orf25Q96B23 403 aaPredicted RBP12.93□□□□□ -0.34
PFDN5-208ENST00000549995 SAAL1Q96ER3 474 aa12.93□□□□□ -0.34
PFDN5-208ENST00000549995 MFSD14AQ96MC6 490 aa12.93□□□□□ -0.34
PFDN5-208ENST00000549995 CDCA3Q99618 268 aaPredicted RBP12.93□□□□□ -0.34
PFDN5-208ENST00000549995 FAM213AQ9BRX8 229 aa12.93□□□□□ -0.34
PFDN5-208ENST00000549995 GZF1Q9H116 711 aaPredicted RBP12.93□□□□□ -0.34
PFDN5-208ENST00000549995 RXFP1Q9HBX9 757 aa12.93□□□□□ -0.34
PFDN5-208ENST00000549995 RBAKQ9NYW8 714 aaPredicted RBP12.93□□□□□ -0.34
PFDN5-208ENST00000549995 TUBGCP4Q9UGJ1 667 aa12.93□□□□□ -0.34
PFDN5-208ENST00000549995 MAN1B1Q9UKM7 699 aa12.93□□□□□ -0.34
PFDN5-208ENST00000549995 PRG3Q9Y2Y8 225 aaPredicted RBP12.93□□□□□ -0.34
PFDN5-208ENST00000549995 SF3B1O75533 1304 aaKnown RBP eCLIP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms