RNA–Protein interactions for RNA: ENST00000549915.5

RAB5B-207, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 494 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-207ENST00000549915 F8VZ95 297 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 UBE2Q2LH0YL09 131 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 RAD51CO43502 376 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 SLC26A4O43511 780 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 PPFIA2O75334 1257 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 FBXO24O75426 580 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 PAGE1O75459 146 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 PALMO75781 387 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 SNUPNO95149 360 aaKnown RBP4.1□□□□□ -1.75
RAB5B-207ENST00000549915 BPNT1O95861 308 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 AGTP01019 485 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 VIMP08670 466 aaKnown RBP4.1□□□□□ -1.75
RAB5B-207ENST00000549915 FAM153BP0C7A2 387 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 PDHBP11177 359 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 FERP16591 822 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 HSPA6P17066 643 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 JUNBP17275 347 aaPredicted RBP4.1□□□□□ -1.75
RAB5B-207ENST00000549915 FGFR2P21802 821 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 PAX7P23759 505 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 ECHS1P30084 290 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 HOXA10P31260 410 aaPredicted RBP4.1□□□□□ -1.75
RAB5B-207ENST00000549915 HPDP32754 393 aaPredicted RBP4.1□□□□□ -1.75
RAB5B-207ENST00000549915 PDE6BP35913 854 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 TXKP42681 527 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 SLC1A4P43007 532 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 MATR3P43243 847 aaKnown RBP eCLIP4.1□□□□□ -1.751e-7■■■□□ 16.9
RAB5B-207ENST00000549915 PDE6CP51160 858 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 CLCN7P51798 805 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 GUCY2FP51841 1108 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 PMS1P54277 932 aaKnown RBP4.1□□□□□ -1.75
RAB5B-207ENST00000549915 CTSWP56202 376 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 NLRP5P59047 1200 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 MRPS35P82673 323 aaKnown RBP4.1□□□□□ -1.75
RAB5B-207ENST00000549915 LACTBP83111 547 aaPredicted RBP4.1□□□□□ -1.75
RAB5B-207ENST00000549915 PRKCQQ04759 706 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 RING1Q06587 406 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 TROAPQ12815 778 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 MYO1EQ12965 1108 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 TRAF1Q13077 416 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 CDK5R2Q13319 367 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 BLMHQ13867 455 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 E2F5Q15329 346 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 RPS6KA1Q15418 735 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 PPP1R7Q15435 360 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 UAP1Q16222 522 aaPredicted RBP4.1□□□□□ -1.75
RAB5B-207ENST00000549915 SLC18A3Q16572 532 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 TSNAXIP1Q2TAA8 658 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 KRT71Q3SY84 523 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 FAM153CQ494X1 144 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 TDRD12Q587J7 1177 aaKnown RBP4.1□□□□□ -1.75
RAB5B-207ENST00000549915 CCDC178Q5BJE1 867 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 ODF2Q5BJF6 829 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 EARS2Q5JPH6 523 aaKnown RBP4.1□□□□□ -1.75
RAB5B-207ENST00000549915 RRP12Q5JTH9 1297 aaKnown RBP4.1□□□□□ -1.75
RAB5B-207ENST00000549915 SFMBT2Q5VUG0 894 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 NAIF1Q69YI7 327 aaPredicted RBP4.1□□□□□ -1.75
RAB5B-207ENST00000549915 CAPRIN2Q6IMN6 1127 aaKnown RBP4.1□□□□□ -1.75
RAB5B-207ENST00000549915 HIBCHQ6NVY1 386 aaPredicted RBP4.1□□□□□ -1.75
RAB5B-207ENST00000549915 LDHAL6AQ6ZMR3 332 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 AGMOQ6ZNB7 445 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 C22orf34Q6ZV56 151 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 BZW1Q7L1Q6 419 aaKnown RBP4.1□□□□□ -1.75
RAB5B-207ENST00000549915 TRPM8Q7Z2W7 1104 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 KRT26Q7Z3Y9 468 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 TMC3Q7Z5M5 1100 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 PIGWQ7Z7B1 504 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 CABP7Q86V35 215 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 COL23A1Q86Y22 540 aaPredicted RBP4.1□□□□□ -1.75
RAB5B-207ENST00000549915 HID1Q8IV36 788 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 MFN1Q8IWA4 741 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 BLIDQ8IZY5 108 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 RASGEF1CQ8N431 466 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 MAGEB6Q8N7X4 407 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 C4orf32Q8N8J7 132 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 ENAHQ8N8S7 591 aaPredicted RBP4.1□□□□□ -1.75
RAB5B-207ENST00000549915 SPATA5Q8NB90 893 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 NEK9Q8TD19 979 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 SH3TC2Q8TF17 1288 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 ZNF483Q8TF39 744 aaPredicted RBP4.1□□□□□ -1.75
RAB5B-207ENST00000549915 NSMCE1Q8WV22 266 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 ZFAND2BQ8WV99 257 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 LMBR1Q8WVP7 490 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 ATXN2LQ8WWM7 1075 aaKnown RBP4.1□□□□□ -1.75
RAB5B-207ENST00000549915 IFT81Q8WYA0 676 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 SHISA4Q96DD7 197 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 HRASLS5Q96KN8 279 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 ZNF317Q96PQ6 595 aaPredicted RBP4.1□□□□□ -1.75
RAB5B-207ENST00000549915 PSMG3-AS1Q96PY0 264 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 RAB3IPQ96QF0 476 aaPredicted RBP4.1□□□□□ -1.75
RAB5B-207ENST00000549915 SETDB2Q96T68 719 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 NAP1L3Q99457 506 aaPredicted RBP4.1□□□□□ -1.75
RAB5B-207ENST00000549915 WNT10AQ9GZT5 417 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 RABEP2Q9H5N1 569 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 PRDM5Q9NQX1 630 aaPredicted RBP4.1□□□□□ -1.75
RAB5B-207ENST00000549915 CNNM1Q9NRU3 951 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.1□□□□□ -1.75
RAB5B-207ENST00000549915 ETAA1Q9NY74 926 aa4.1□□□□□ -1.75
RAB5B-207ENST00000549915 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.1□□□□□ -1.75
RAB5B-207ENST00000549915 ZC3H7BQ9UGR2 993 aaKnown RBP4.1□□□□□ -1.75
RAB5B-207ENST00000549915 FAM153AQ9UHL3 310 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms