RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 PPME1Q9Y570 386 aa9.91□□□□□ -0.82
UBE2N-203ENST00000549490 CDY1Q9Y6F8 540 aa9.91□□□□□ -0.82
UBE2N-203ENST00000549490 NOTCH4Q99466 2003 aa9.9□□□□□ -0.82
UBE2N-203ENST00000549490 ZMYM2Q9UBW7 1377 aa9.9□□□□□ -0.82
UBE2N-203ENST00000549490 SDK1Q7Z5N4 2213 aa9.9□□□□□ -0.82
UBE2N-203ENST00000549490 DMXL2Q8TDJ6 3036 aa9.9□□□□□ -0.82
UBE2N-203ENST00000549490 ARHGEF37A1IGU5 675 aa9.9□□□□□ -0.82
UBE2N-203ENST00000549490 WDR27A2RRH5 827 aa9.9□□□□□ -0.82
UBE2N-203ENST00000549490 TMEM8BA6NDV4 472 aa9.9□□□□□ -0.82
UBE2N-203ENST00000549490 ARNTLO00327 626 aa9.9□□□□□ -0.82
UBE2N-203ENST00000549490 PTGESO14684 152 aa9.9□□□□□ -0.82
UBE2N-203ENST00000549490 ZNF263O14978 683 aa9.9□□□□□ -0.82
UBE2N-203ENST00000549490 FGFR3P22607 806 aa9.9□□□□□ -0.82
UBE2N-203ENST00000549490 VIPR2P41587 438 aa9.9□□□□□ -0.82
UBE2N-203ENST00000549490 RAP1GAPP47736 663 aa9.9□□□□□ -0.82
UBE2N-203ENST00000549490 NOVA1P51513 510 aaKnown RBP9.9□□□□□ -0.82
UBE2N-203ENST00000549490 SPIRE1Q08AE8 756 aa9.9□□□□□ -0.82
UBE2N-203ENST00000549490 ELAVL2Q12926 359 aaKnown RBP9.9□□□□□ -0.82
UBE2N-203ENST00000549490 FOXC1Q12948 553 aa9.9□□□□□ -0.82
UBE2N-203ENST00000549490 LRRC32Q14392 662 aa9.9□□□□□ -0.82
UBE2N-203ENST00000549490 EMC2Q15006 297 aa9.9□□□□□ -0.82
UBE2N-203ENST00000549490 NAB2Q15742 525 aa9.9□□□□□ -0.82
UBE2N-203ENST00000549490 DIEXFQ68CQ4 756 aaKnown RBP9.9□□□□□ -0.82
UBE2N-203ENST00000549490 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.9□□□□□ -0.82
UBE2N-203ENST00000549490 CACNA2D4Q7Z3S7 1137 aa9.9□□□□□ -0.82
UBE2N-203ENST00000549490 KBTBD6Q86V97 674 aa9.9□□□□□ -0.82
UBE2N-203ENST00000549490 IFNLR1Q8IU57 520 aaPredicted RBP9.9□□□□□ -0.82
UBE2N-203ENST00000549490 TBCKQ8TEA7 893 aa9.9□□□□□ -0.82
UBE2N-203ENST00000549490 GATA6Q92908 595 aa9.9□□□□□ -0.82
UBE2N-203ENST00000549490 SMARCD2Q92925 531 aa9.9□□□□□ -0.82
UBE2N-203ENST00000549490 ADAM33Q9BZ11 813 aa9.9□□□□□ -0.82
UBE2N-203ENST00000549490 NCANO14594 1321 aa9.89□□□□□ -0.83
UBE2N-203ENST00000549490 A0A1B0GUA9 196 aa9.89□□□□□ -0.83
UBE2N-203ENST00000549490 ZNF197O14709 1029 aa9.89□□□□□ -0.83
UBE2N-203ENST00000549490 ZBTB39O15060 712 aa9.89□□□□□ -0.83
UBE2N-203ENST00000549490 PRPF3O43395 683 aaKnown RBP9.89□□□□□ -0.83
UBE2N-203ENST00000549490 DKC1O60832 514 aaKnown RBP eCLIP9.89□□□□□ -0.83
UBE2N-203ENST00000549490 MICAL2O94851 1124 aa9.89□□□□□ -0.83
UBE2N-203ENST00000549490 LRG1P02750 347 aa9.89□□□□□ -0.83
UBE2N-203ENST00000549490 SOX9P48436 509 aa9.89□□□□□ -0.83
UBE2N-203ENST00000549490 RCAN1P53805 252 aa9.89□□□□□ -0.83
UBE2N-203ENST00000549490 MLLT6P55198 1093 aaPredicted RBP9.89□□□□□ -0.83
UBE2N-203ENST00000549490 POU5F1BQ06416 359 aa9.89□□□□□ -0.83
UBE2N-203ENST00000549490 ZNF252P-AS1Q0IIN9 211 aa9.89□□□□□ -0.83
UBE2N-203ENST00000549490 MXD4Q14582 209 aaPredicted RBP9.89□□□□□ -0.83
UBE2N-203ENST00000549490 RNF43Q68DV7 783 aa9.89□□□□□ -0.83
UBE2N-203ENST00000549490 SLC27A1Q6PCB7 646 aa9.89□□□□□ -0.83
UBE2N-203ENST00000549490 TXNDC11Q6PKC3 985 aa9.89□□□□□ -0.83
UBE2N-203ENST00000549490 DHX32Q7L7V1 743 aaKnown RBP9.89□□□□□ -0.83
UBE2N-203ENST00000549490 MFSD6LQ8IWD5 586 aa9.89□□□□□ -0.83
UBE2N-203ENST00000549490 DEPDC1BQ8WUY9 529 aa9.89□□□□□ -0.83
UBE2N-203ENST00000549490 GAB3Q8WWW8 586 aa9.89□□□□□ -0.83
UBE2N-203ENST00000549490 CXCL16Q9H2A7 254 aa9.89□□□□□ -0.83
UBE2N-203ENST00000549490 TRPV4Q9HBA0 871 aa9.89□□□□□ -0.83
UBE2N-203ENST00000549490 XPNPEP1Q9NQW7 623 aa9.89□□□□□ -0.83
UBE2N-203ENST00000549490 VPS54Q9P1Q0 977 aa9.89□□□□□ -0.83
UBE2N-203ENST00000549490 NAP1L2Q9ULW6 460 aaPredicted RBP9.89□□□□□ -0.83
UBE2N-203ENST00000549490 BACE2Q9Y5Z0 518 aa9.89□□□□□ -0.83
UBE2N-203ENST00000549490 LAMA1P25391 3075 aa9.88□□□□□ -0.83
UBE2N-203ENST00000549490 SMG1Q96Q15 3661 aaKnown RBP9.88□□□□□ -0.83
UBE2N-203ENST00000549490 CCDC196A0A1B0GTZ2 297 aa9.88□□□□□ -0.83
UBE2N-203ENST00000549490 SLC38A8A6NNN8 435 aa9.88□□□□□ -0.83
UBE2N-203ENST00000549490 MOSPD3O75425 235 aa9.88□□□□□ -0.83
UBE2N-203ENST00000549490 RPP40O75818 363 aaKnown RBP9.88□□□□□ -0.83
UBE2N-203ENST00000549490 THP07101 528 aa9.88□□□□□ -0.83
UBE2N-203ENST00000549490 P4HBP07237 508 aaKnown RBP9.88□□□□□ -0.83
UBE2N-203ENST00000549490 TKTP29401 623 aaKnown RBP9.88□□□□□ -0.83
UBE2N-203ENST00000549490 YWHABP31946 246 aaKnown RBP9.88□□□□□ -0.83
UBE2N-203ENST00000549490 MPLP40238 635 aa9.88□□□□□ -0.83
UBE2N-203ENST00000549490 PXNP49023 591 aaPredicted RBP9.88□□□□□ -0.83
UBE2N-203ENST00000549490 PPP2R5CQ13362 524 aa9.88□□□□□ -0.83
UBE2N-203ENST00000549490 CAPSQ13938 189 aa9.88□□□□□ -0.83
UBE2N-203ENST00000549490 TFDP1Q14186 410 aa9.88□□□□□ -0.83
UBE2N-203ENST00000549490 XKR9Q5GH70 373 aa9.88□□□□□ -0.83
UBE2N-203ENST00000549490 DGKKQ5KSL6 1271 aa9.88□□□□□ -0.83
UBE2N-203ENST00000549490 TCEAL6Q6IPX3 200 aa9.88□□□□□ -0.83
UBE2N-203ENST00000549490 PDZD4Q76G19 769 aaPredicted RBP9.88□□□□□ -0.83
UBE2N-203ENST00000549490 C4orf19Q8IY42 314 aa9.88□□□□□ -0.83
UBE2N-203ENST00000549490 CCDC148Q8NFR7 591 aa9.88□□□□□ -0.83
UBE2N-203ENST00000549490 ZNF461Q8TAF7 563 aa9.88□□□□□ -0.83
UBE2N-203ENST00000549490 ASAP3Q8TDY4 903 aa9.88□□□□□ -0.83
UBE2N-203ENST00000549490 ZCCHC14Q8WYQ9 949 aaKnown RBP9.88□□□□□ -0.83
UBE2N-203ENST00000549490 TCEAL3Q969E4 200 aa9.88□□□□□ -0.83
UBE2N-203ENST00000549490 MSANTD3Q96H12 275 aa9.88□□□□□ -0.83
UBE2N-203ENST00000549490 MTRQ99707 1265 aa9.88□□□□□ -0.83
UBE2N-203ENST00000549490 C8orf33Q9H7E9 229 aaPredicted RBP9.88□□□□□ -0.83
UBE2N-203ENST00000549490 VPS45Q9NRW7 570 aa9.88□□□□□ -0.83
UBE2N-203ENST00000549490 RGL1Q9NZL6 768 aa9.88□□□□□ -0.83
UBE2N-203ENST00000549490 VAV3Q9UKW4 847 aa9.88□□□□□ -0.83
UBE2N-203ENST00000549490 PCDHGA5Q9Y5G8 931 aa9.88□□□□□ -0.83
UBE2N-203ENST00000549490 WDFY3Q8IZQ1 3526 aa9.87□□□□□ -0.83
UBE2N-203ENST00000549490 MYBPHLA2RUH7 354 aa9.87□□□□□ -0.83
UBE2N-203ENST00000549490 C4orf47A7E2U8 309 aa9.87□□□□□ -0.83
UBE2N-203ENST00000549490 HEPACAM2A8MVW5 462 aa9.87□□□□□ -0.83
UBE2N-203ENST00000549490 TAF4O00268 1085 aa9.87□□□□□ -0.83
UBE2N-203ENST00000549490 PRRG1O14668 218 aa9.87□□□□□ -0.83
UBE2N-203ENST00000549490 SLC37A4O43826 429 aa9.87□□□□□ -0.83
UBE2N-203ENST00000549490 EXTL3O43909 919 aa9.87□□□□□ -0.83
UBE2N-203ENST00000549490 B3GAT3O94766 335 aa9.87□□□□□ -0.83
UBE2N-203ENST00000549490 ABLIM3O94929 683 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms