RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 OSTNP61366 133 aa19.08■□□□□ 0.64
CHMP1A-205ENST00000548650 ALKAL1Q6UXT8 129 aa19.08■□□□□ 0.64
CHMP1A-205ENST00000548650 SIX5Q8N196 739 aa19.08■□□□□ 0.64
CHMP1A-205ENST00000548650 FLCNQ8NFG4 579 aa19.08■□□□□ 0.64
CHMP1A-205ENST00000548650 DDX27Q96GQ7 796 aaKnown RBP19.08■□□□□ 0.64
CHMP1A-205ENST00000548650 ZMAT2Q96NC0 199 aaKnown RBP19.08■□□□□ 0.64
CHMP1A-205ENST00000548650 TIPINQ9BVW5 301 aa19.08■□□□□ 0.64
CHMP1A-205ENST00000548650 IRF2BPLQ9H1B7 796 aa19.08■□□□□ 0.64
CHMP1A-205ENST00000548650 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.08■□□□□ 0.64
CHMP1A-205ENST00000548650 FBXL21Q9UKT6 434 aa19.08■□□□□ 0.64
CHMP1A-205ENST00000548650 RBM19Q9Y4C8 960 aaKnown RBP19.08■□□□□ 0.64
CHMP1A-205ENST00000548650 VWA3AA6NCI4 1184 aa19.07■□□□□ 0.64
CHMP1A-205ENST00000548650 I3L4J1 428 aa19.07■□□□□ 0.64
CHMP1A-205ENST00000548650 AOC1P19801 751 aa19.07■□□□□ 0.64
CHMP1A-205ENST00000548650 TKTP29401 623 aaKnown RBP19.07■□□□□ 0.64
CHMP1A-205ENST00000548650 HTR4Q13639 388 aa19.07■□□□□ 0.64
CHMP1A-205ENST00000548650 RAB33AQ14088 237 aa19.07■□□□□ 0.64
CHMP1A-205ENST00000548650 ZRSR1Q15695 479 aaKnown RBP19.07■□□□□ 0.64
CHMP1A-205ENST00000548650 TMEM119Q4V9L6 283 aa19.07■□□□□ 0.64
CHMP1A-205ENST00000548650 PPM1LQ5SGD2 360 aa19.07■□□□□ 0.64
CHMP1A-205ENST00000548650 DCLRE1AQ6PJP8 1040 aa19.07■□□□□ 0.64
CHMP1A-205ENST00000548650 MPZL3Q6UWV2 235 aa19.07■□□□□ 0.64
CHMP1A-205ENST00000548650 RSPO2Q6UXX9 243 aaPredicted RBP19.07■□□□□ 0.64
CHMP1A-205ENST00000548650 SLC7A14Q8TBB6 771 aa19.07■□□□□ 0.64
CHMP1A-205ENST00000548650 ATOH1Q92858 354 aaPredicted RBP19.07■□□□□ 0.64
CHMP1A-205ENST00000548650 MYO15AQ9UKN7 3530 aa19.07■□□□□ 0.64
CHMP1A-205ENST00000548650 SFI1A8K8P3 1242 aa19.06■□□□□ 0.64
CHMP1A-205ENST00000548650 ANHXE9PGG2 379 aa19.06■□□□□ 0.64
CHMP1A-205ENST00000548650 CFHP08603 1231 aa19.06■□□□□ 0.64
CHMP1A-205ENST00000548650 POU2F2P09086 479 aa19.06■□□□□ 0.64
CHMP1A-205ENST00000548650 SRFP11831 508 aa19.06■□□□□ 0.64
CHMP1A-205ENST00000548650 PLS3P13797 630 aa19.06■□□□□ 0.64
CHMP1A-205ENST00000548650 KCNE1P15382 129 aa19.06■□□□□ 0.64
CHMP1A-205ENST00000548650 FSHRP23945 695 aa19.06■□□□□ 0.64
CHMP1A-205ENST00000548650 OR1D2P34982 312 aa19.06■□□□□ 0.64
CHMP1A-205ENST00000548650 BRCC3P46736 316 aa19.06■□□□□ 0.64
CHMP1A-205ENST00000548650 SLC12A3P55017 1021 aa19.06■□□□□ 0.64
CHMP1A-205ENST00000548650 NTHL1P78549 312 aa19.06■□□□□ 0.64
CHMP1A-205ENST00000548650 RAD51AP2Q09MP3 1159 aa19.06■□□□□ 0.64
CHMP1A-205ENST00000548650 ARL6IP4Q66PJ3 421 aaKnown RBP19.06■□□□□ 0.64
CHMP1A-205ENST00000548650 GRASPQ7Z6J2 395 aaPredicted RBP19.06■□□□□ 0.64
CHMP1A-205ENST00000548650 SLC44A3Q8N4M1 653 aa19.06■□□□□ 0.64
CHMP1A-205ENST00000548650 KCTD17Q8N5Z5 321 aa19.06■□□□□ 0.64
CHMP1A-205ENST00000548650 TMEM161BQ8NDZ6 487 aa19.06■□□□□ 0.64
CHMP1A-205ENST00000548650 SPIRE2Q8WWL2 714 aa19.06■□□□□ 0.64
CHMP1A-205ENST00000548650 NXPE3Q969Y0 559 aa19.06■□□□□ 0.64
CHMP1A-205ENST00000548650 NTPCRQ9BSD7 190 aaKnown RBP19.06■□□□□ 0.64
CHMP1A-205ENST00000548650 CNTN3Q9P232 1028 aa19.06■□□□□ 0.64
CHMP1A-205ENST00000548650 BACE2Q9Y5Z0 518 aa19.06■□□□□ 0.64
CHMP1A-205ENST00000548650 CDY1Q9Y6F8 540 aa19.06■□□□□ 0.64
CHMP1A-205ENST00000548650 ZFHX2Q9C0A1 2572 aaPredicted RBP19.06■□□□□ 0.64
CHMP1A-205ENST00000548650 KRBA1A5PL33 1030 aa19.05■□□□□ 0.64
CHMP1A-205ENST00000548650 H3BQV1 296 aa19.05■□□□□ 0.64
CHMP1A-205ENST00000548650 PODXLO00592 558 aa19.05■□□□□ 0.64
CHMP1A-205ENST00000548650 CCL16O15467 120 aa19.05■□□□□ 0.64
CHMP1A-205ENST00000548650 PI15O43692 258 aa19.05■□□□□ 0.64
CHMP1A-205ENST00000548650 MAPTP10636 758 aaKnown RBP19.05■□□□□ 0.64
CHMP1A-205ENST00000548650 HARSP12081 509 aaKnown RBP19.05■□□□□ 0.64
CHMP1A-205ENST00000548650 NOLC1Q14978 699 aaKnown RBP eCLIP19.05■□□□□ 0.64
CHMP1A-205ENST00000548650 SYT2Q8N9I0 419 aaPredicted RBP19.05■□□□□ 0.64
CHMP1A-205ENST00000548650 PLIN2Q99541 437 aa19.05■□□□□ 0.64
CHMP1A-205ENST00000548650 SLC38A7Q9NVC3 462 aa19.05■□□□□ 0.64
CHMP1A-205ENST00000548650 KCND2Q9NZV8 630 aa19.05■□□□□ 0.64
CHMP1A-205ENST00000548650 ANKFY1Q9P2R3 1169 aa19.05■□□□□ 0.64
CHMP1A-205ENST00000548650 WNT16Q9UBV4 365 aa19.05■□□□□ 0.64
CHMP1A-205ENST00000548650 NUMBLQ9Y6R0 609 aa19.05■□□□□ 0.64
CHMP1A-205ENST00000548650 TRAPPC3O43617 180 aa19.04■□□□□ 0.64
CHMP1A-205ENST00000548650 XYLBO75191 536 aa19.04■□□□□ 0.64
CHMP1A-205ENST00000548650 TOM1L1O75674 476 aa19.04■□□□□ 0.64
CHMP1A-205ENST00000548650 PLA2G4BP0C869 781 aa19.04■□□□□ 0.64
CHMP1A-205ENST00000548650 AXDND1Q5T1B0 1012 aaPredicted RBP19.04■□□□□ 0.64
CHMP1A-205ENST00000548650 ANKS3Q6ZW76 656 aa19.04■□□□□ 0.64
CHMP1A-205ENST00000548650 ZBTB45Q96K62 511 aaPredicted RBP19.04■□□□□ 0.64
CHMP1A-205ENST00000548650 ACAP3Q96P50 834 aa19.04■□□□□ 0.64
CHMP1A-205ENST00000548650 TCHPQ9BT92 498 aa19.04■□□□□ 0.64
CHMP1A-205ENST00000548650 ZFP37Q9Y6Q3 630 aaPredicted RBP19.04■□□□□ 0.64
CHMP1A-205ENST00000548650 MCM2P49736 904 aa19.03■□□□□ 0.64
CHMP1A-205ENST00000548650 CACNB1Q02641 598 aaPredicted RBP19.03■□□□□ 0.64
CHMP1A-205ENST00000548650 STRN3Q13033 797 aa19.03■□□□□ 0.64
CHMP1A-205ENST00000548650 SLC8B1Q6J4K2 584 aa19.03■□□□□ 0.64
CHMP1A-205ENST00000548650 ZPBP2Q6X784 338 aa19.03■□□□□ 0.64
CHMP1A-205ENST00000548650 CCDC105Q8IYK2 499 aa19.03■□□□□ 0.64
CHMP1A-205ENST00000548650 ST13P5Q8NFI4 369 aaPredicted RBP19.03■□□□□ 0.64
CHMP1A-205ENST00000548650 GPR152Q8TDT2 470 aa19.03■□□□□ 0.64
CHMP1A-205ENST00000548650 LRRC15Q8TF66 581 aa19.03■□□□□ 0.64
CHMP1A-205ENST00000548650 C18orf25Q96B23 403 aaPredicted RBP19.03■□□□□ 0.64
CHMP1A-205ENST00000548650 CDK5RAP3Q96JB5 506 aa19.03■□□□□ 0.64
CHMP1A-205ENST00000548650 HCFC1R1Q9NWW0 138 aa19.03■□□□□ 0.64
CHMP1A-205ENST00000548650 CDH7Q9ULB5 785 aa19.03■□□□□ 0.64
CHMP1A-205ENST00000548650 SMC3Q9UQE7 1217 aa19.03■□□□□ 0.64
CHMP1A-205ENST00000548650 COL4A3Q01955 1670 aa19.03■□□□□ 0.64
CHMP1A-205ENST00000548650 TSC2P49815 1807 aa19.02■□□□□ 0.64
CHMP1A-205ENST00000548650 MIA3Q5JRA6 1907 aa19.02■□□□□ 0.64
CHMP1A-205ENST00000548650 NPHP3-ACAD11A0A0J9YXS1 232 aa19.02■□□□□ 0.64
CHMP1A-205ENST00000548650 PROB1E7EW31 1015 aa19.02■□□□□ 0.64
CHMP1A-205ENST00000548650 GFRA3O60609 400 aa19.02■□□□□ 0.64
CHMP1A-205ENST00000548650 NCKAP1LP55160 1127 aa19.02■□□□□ 0.64
CHMP1A-205ENST00000548650 ROR1Q01973 937 aa19.02■□□□□ 0.64
CHMP1A-205ENST00000548650 UVSSAQ2YD98 709 aa19.02■□□□□ 0.64
CHMP1A-205ENST00000548650 SEZ6Q53EL9 994 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms