RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 CLDN3O15551 220 aa10.4□□□□□ -0.74
USP15-208ENST00000548524 TRAK2O60296 914 aa10.4□□□□□ -0.74
USP15-208ENST00000548524 YEATS4O95619 227 aa10.4□□□□□ -0.74
USP15-208ENST00000548524 F13A1P00488 732 aa10.4□□□□□ -0.74
USP15-208ENST00000548524 SCP2P22307 547 aa10.4□□□□□ -0.74
USP15-208ENST00000548524 PROZP22891 400 aa10.4□□□□□ -0.74
USP15-208ENST00000548524 STAT6P42226 847 aa10.4□□□□□ -0.74
USP15-208ENST00000548524 LIG4P49917 911 aa10.4□□□□□ -0.74
USP15-208ENST00000548524 ZNF131P52739 623 aa10.4□□□□□ -0.74
USP15-208ENST00000548524 KCNC3Q14003 757 aa10.4□□□□□ -0.74
USP15-208ENST00000548524 NOLC1Q14978 699 aaKnown RBP eCLIP10.4□□□□□ -0.74
USP15-208ENST00000548524 USP41Q3LFD5 358 aa10.4□□□□□ -0.74
USP15-208ENST00000548524 CES5AQ6NT32 575 aa10.4□□□□□ -0.74
USP15-208ENST00000548524 SYCE2Q6PIF2 218 aa10.4□□□□□ -0.74
USP15-208ENST00000548524 ADGRD1Q6QNK2 874 aa10.4□□□□□ -0.74
USP15-208ENST00000548524 ZPBP2Q6X784 338 aa10.4□□□□□ -0.74
USP15-208ENST00000548524 DYMQ7RTS9 669 aa10.4□□□□□ -0.74
USP15-208ENST00000548524 HAUS6Q7Z4H7 955 aa10.4□□□□□ -0.74
USP15-208ENST00000548524 HASPINQ8TF76 798 aa10.4□□□□□ -0.74
USP15-208ENST00000548524 ZBTB45Q96K62 511 aaPredicted RBP10.4□□□□□ -0.74
USP15-208ENST00000548524 KLHL5Q96PQ7 755 aa10.4□□□□□ -0.74
USP15-208ENST00000548524 PANK2Q9BZ23 570 aa10.4□□□□□ -0.74
USP15-208ENST00000548524 CD320Q9NPF0 282 aa10.4□□□□□ -0.74
USP15-208ENST00000548524 CACNG4Q9UBN1 327 aa10.4□□□□□ -0.74
USP15-208ENST00000548524 KIAA1671Q9BY89 1806 aa10.4□□□□□ -0.75
USP15-208ENST00000548524 SMIM28A0A1B0GU29 152 aa10.39□□□□□ -0.75
USP15-208ENST00000548524 C3orf80F5H4A9 247 aa10.39□□□□□ -0.75
USP15-208ENST00000548524 TK2O00142 265 aa10.39□□□□□ -0.75
USP15-208ENST00000548524 LILRB3O75022 631 aa10.39□□□□□ -0.75
USP15-208ENST00000548524 PPP6R2O75170 966 aa10.39□□□□□ -0.75
USP15-208ENST00000548524 KIF4AO95239 1232 aa10.39□□□□□ -0.75
USP15-208ENST00000548524 BRD1O95696 1058 aa10.39□□□□□ -0.75
USP15-208ENST00000548524 ADH1AP07327 375 aa10.39□□□□□ -0.75
USP15-208ENST00000548524 CNPP09543 421 aaKnown RBP10.39□□□□□ -0.75
USP15-208ENST00000548524 EPCAMP16422 314 aa10.39□□□□□ -0.75
USP15-208ENST00000548524 ABCD1P33897 745 aa10.39□□□□□ -0.75
USP15-208ENST00000548524 DSG1Q02413 1049 aa10.39□□□□□ -0.75
USP15-208ENST00000548524 ELAVL2Q12926 359 aaKnown RBP10.39□□□□□ -0.75
USP15-208ENST00000548524 RARS2Q5T160 578 aaKnown RBP10.39□□□□□ -0.75
USP15-208ENST00000548524 ELMSAN1Q6PJG2 1045 aa10.39□□□□□ -0.75
USP15-208ENST00000548524 RNF168Q8IYW5 571 aaPredicted RBP10.39□□□□□ -0.75
USP15-208ENST00000548524 PDILTQ8N807 584 aa10.39□□□□□ -0.75
USP15-208ENST00000548524 SLC22A17Q8WUG5 538 aa10.39□□□□□ -0.75
USP15-208ENST00000548524 RIN2Q8WYP3 895 aaPredicted RBP10.39□□□□□ -0.75
USP15-208ENST00000548524 FBXL18Q96ME1 805 aa10.39□□□□□ -0.75
USP15-208ENST00000548524 UROC1Q96N76 676 aa10.39□□□□□ -0.75
USP15-208ENST00000548524 PPP1R10Q96QC0 940 aaKnown RBP10.39□□□□□ -0.75
USP15-208ENST00000548524 PAAF1Q9BRP4 392 aa10.39□□□□□ -0.75
USP15-208ENST00000548524 PHF7Q9BWX1 381 aaPredicted RBP10.39□□□□□ -0.75
USP15-208ENST00000548524 GPR62Q9BZJ7 368 aa10.39□□□□□ -0.75
USP15-208ENST00000548524 S1PR5Q9H228 398 aa10.39□□□□□ -0.75
USP15-208ENST00000548524 CXCL16Q9H2A7 254 aa10.39□□□□□ -0.75
USP15-208ENST00000548524 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.39□□□□□ -0.75
USP15-208ENST00000548524 SLC38A7Q9NVC3 462 aa10.39□□□□□ -0.75
USP15-208ENST00000548524 RABGEF1Q9UJ41 708 aa10.39□□□□□ -0.75
USP15-208ENST00000548524 TBX20Q9UMR3 447 aa10.39□□□□□ -0.75
USP15-208ENST00000548524 ADGRG1Q9Y653 693 aa10.39□□□□□ -0.75
USP15-208ENST00000548524 VCANP13611 3396 aa10.39□□□□□ -0.75
USP15-208ENST00000548524 ABLIM1O14639 778 aa10.38□□□□□ -0.75
USP15-208ENST00000548524 HNRNPDLO14979 420 aaKnown RBP10.38□□□□□ -0.75
USP15-208ENST00000548524 TEX28O15482 410 aa10.38□□□□□ -0.75
USP15-208ENST00000548524 CUTAO60888 179 aa10.38□□□□□ -0.75
USP15-208ENST00000548524 B3GAT3O94766 335 aa10.38□□□□□ -0.75
USP15-208ENST00000548524 IDEP14735 1019 aa10.38□□□□□ -0.75
USP15-208ENST00000548524 NMT1P30419 496 aaKnown RBP10.38□□□□□ -0.75
USP15-208ENST00000548524 CLCN4P51793 760 aa10.38□□□□□ -0.75
USP15-208ENST00000548524 CREMQ03060 361 aa10.38□□□□□ -0.75
USP15-208ENST00000548524 ITIH3Q06033 890 aa10.38□□□□□ -0.75
USP15-208ENST00000548524 MCL1Q07820 350 aa10.38□□□□□ -0.75
USP15-208ENST00000548524 CBX2Q14781 532 aaPredicted RBP10.38□□□□□ -0.75
USP15-208ENST00000548524 NAB2Q15742 525 aa10.38□□□□□ -0.75
USP15-208ENST00000548524 SEZ6Q53EL9 994 aa10.38□□□□□ -0.75
USP15-208ENST00000548524 FAM171A1Q5VUB5 890 aa10.38□□□□□ -0.75
USP15-208ENST00000548524 KIAA0319Q5VV43 1072 aa10.38□□□□□ -0.75
USP15-208ENST00000548524 NUDT18Q6ZVK8 323 aa10.38□□□□□ -0.75
USP15-208ENST00000548524 SFR1Q86XK3 245 aa10.38□□□□□ -0.75
USP15-208ENST00000548524 CEP57Q86XR8 500 aa10.38□□□□□ -0.75
USP15-208ENST00000548524 C12orf76Q8N812 135 aaPredicted RBP10.38□□□□□ -0.75
USP15-208ENST00000548524 KCNG4Q8TDN1 519 aa10.38□□□□□ -0.75
USP15-208ENST00000548524 SUSD6Q92537 303 aa10.38□□□□□ -0.75
USP15-208ENST00000548524 TATDN2Q93075 761 aa10.38□□□□□ -0.75
USP15-208ENST00000548524 RPGRIP1Q96KN7 1286 aa10.38□□□□□ -0.75
USP15-208ENST00000548524 B3GALT6Q96L58 329 aa10.38□□□□□ -0.75
USP15-208ENST00000548524 SNX27Q96L92 541 aa10.38□□□□□ -0.75
USP15-208ENST00000548524 RIPOR3Q96MK2 946 aa10.38□□□□□ -0.75
USP15-208ENST00000548524 NECTIN4Q96NY8 510 aa10.38□□□□□ -0.75
USP15-208ENST00000548524 ADAM7Q9H2U9 754 aa10.38□□□□□ -0.75
USP15-208ENST00000548524 RXFP1Q9HBX9 757 aa10.38□□□□□ -0.75
USP15-208ENST00000548524 CHST7Q9NS84 486 aa10.38□□□□□ -0.75
USP15-208ENST00000548524 DPP7Q9UHL4 492 aa10.38□□□□□ -0.75
USP15-208ENST00000548524 CFAP45Q9UL16 551 aa10.38□□□□□ -0.75
USP15-208ENST00000548524 PLXNA4Q9HCM2 1894 aa10.38□□□□□ -0.75
USP15-208ENST00000548524 A0A087X0B3 334 aa10.37□□□□□ -0.75
USP15-208ENST00000548524 MYMKA6NI61 221 aa10.37□□□□□ -0.75
USP15-208ENST00000548524 SMAPO00193 183 aa10.37□□□□□ -0.75
USP15-208ENST00000548524 TRAPPC3O43617 180 aa10.37□□□□□ -0.75
USP15-208ENST00000548524 EFEMP2O95967 443 aa10.37□□□□□ -0.75
USP15-208ENST00000548524 GLUD1P00367 558 aa10.37□□□□□ -0.75
USP15-208ENST00000548524 PIGRP01833 764 aa10.37□□□□□ -0.75
USP15-208ENST00000548524 CLTAP09496 248 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms