RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 TRMT1LQ7Z2T5 733 aaKnown RBP15.58■□□□□ 0.08
PTCH1-217ENST00000548420 SMAP1Q8IYB5 467 aaPredicted RBP15.58■□□□□ 0.08
PTCH1-217ENST00000548420 ETNPPLQ8TBG4 499 aa15.58■□□□□ 0.08
PTCH1-217ENST00000548420 MKNK1Q9BUB5 465 aa15.58■□□□□ 0.08
PTCH1-217ENST00000548420 GPR62Q9BZJ7 368 aa15.58■□□□□ 0.08
PTCH1-217ENST00000548420 BRD9Q9H8M2 597 aa15.58■□□□□ 0.08
PTCH1-217ENST00000548420 ZNF334Q9HCZ1 680 aaPredicted RBP15.58■□□□□ 0.08
PTCH1-217ENST00000548420 FNIP2Q9P278 1114 aa15.58■□□□□ 0.08
PTCH1-217ENST00000548420 MAFBQ9Y5Q3 323 aaPredicted RBP15.58■□□□□ 0.08
PTCH1-217ENST00000548420 GTF3C3Q9Y5Q9 886 aa15.58■□□□□ 0.08
PTCH1-217ENST00000548420 PLXNB3Q9ULL4 1909 aa15.58■□□□□ 0.08
PTCH1-217ENST00000548420 NUP205Q92621 2012 aa15.58■□□□□ 0.08
PTCH1-217ENST00000548420 CCDC194A0A1B0GVG4 234 aa15.57■□□□□ 0.08
PTCH1-217ENST00000548420 DDX39AO00148 427 aaKnown RBP15.57■□□□□ 0.08
PTCH1-217ENST00000548420 CD2BP2O95400 341 aaKnown RBP15.57■□□□□ 0.08
PTCH1-217ENST00000548420 POMCP01189 267 aa15.57■□□□□ 0.08
PTCH1-217ENST00000548420 KRT2P35908 639 aa15.57■□□□□ 0.08
PTCH1-217ENST00000548420 SLC5A9Q2M3M2 681 aa15.57■□□□□ 0.08
PTCH1-217ENST00000548420 PLK5Q496M5 336 aa15.57■□□□□ 0.08
PTCH1-217ENST00000548420 SWSAP1Q6NVH7 229 aa15.57■□□□□ 0.08
PTCH1-217ENST00000548420 MIS18BP1Q6P0N0 1132 aa15.57■□□□□ 0.08
PTCH1-217ENST00000548420 PIK3AP1Q6ZUJ8 805 aa15.57■□□□□ 0.08
PTCH1-217ENST00000548420 NEK8Q86SG6 692 aa15.57■□□□□ 0.08
PTCH1-217ENST00000548420 COLGALT2Q8IYK4 626 aa15.57■□□□□ 0.08
PTCH1-217ENST00000548420 ELSPBP1Q96BH3 223 aa15.57■□□□□ 0.08
PTCH1-217ENST00000548420 DUSP15Q9H1R2 295 aaPredicted RBP15.57■□□□□ 0.08
PTCH1-217ENST00000548420 KCNMB3Q9NPA1 279 aa15.57■□□□□ 0.08
PTCH1-217ENST00000548420 CHST12Q9NRB3 414 aa15.57■□□□□ 0.08
PTCH1-217ENST00000548420 POLIQ9UNA4 740 aa15.57■□□□□ 0.08
PTCH1-217ENST00000548420 RAXQ9Y2V3 346 aa15.57■□□□□ 0.08
PTCH1-217ENST00000548420 PCDHA10Q9Y5I2 948 aa15.57■□□□□ 0.08
PTCH1-217ENST00000548420 PIEZO2Q9H5I5 2752 aa15.57■□□□□ 0.08
PTCH1-217ENST00000548420 PDCD11Q14690 1871 aaKnown RBP15.57■□□□□ 0.08
PTCH1-217ENST00000548420 BTBD18B2RXH4 712 aa15.56■□□□□ 0.08
PTCH1-217ENST00000548420 BACH1O14867 736 aa15.56■□□□□ 0.08
PTCH1-217ENST00000548420 EXTL3O43909 919 aa15.56■□□□□ 0.08
PTCH1-217ENST00000548420 HNRNPA1P09651 372 aaKnown RBP eCLIP15.56■□□□□ 0.08
PTCH1-217ENST00000548420 GCFC2P16383 781 aaKnown RBP15.56■□□□□ 0.08
PTCH1-217ENST00000548420 HMGN5P82970 282 aaKnown RBP15.56■□□□□ 0.08
PTCH1-217ENST00000548420 TWF2Q6IBS0 349 aaKnown RBP15.56■□□□□ 0.08
PTCH1-217ENST00000548420 PDXDC2PQ6P474 469 aa15.56■□□□□ 0.08
PTCH1-217ENST00000548420 ZNF302Q9NR11 478 aa15.56■□□□□ 0.08
PTCH1-217ENST00000548420 DDX25Q9UHL0 483 aaKnown RBP15.56■□□□□ 0.08
PTCH1-217ENST00000548420 MYH9P35579 1960 aaKnown RBP15.56■□□□□ 0.08
PTCH1-217ENST00000548420 ABCA7Q8IZY2 2146 aa15.55■□□□□ 0.08
PTCH1-217ENST00000548420 NCANO14594 1321 aa15.55■□□□□ 0.08
PTCH1-217ENST00000548420 FAM205CA6NFA0 338 aa15.55■□□□□ 0.08
PTCH1-217ENST00000548420 WDR64B1ANS9 1081 aa15.55■□□□□ 0.08
PTCH1-217ENST00000548420 SLC37A4O43826 429 aa15.55■□□□□ 0.08
PTCH1-217ENST00000548420 CAVIN2O95810 425 aa15.55■□□□□ 0.08
PTCH1-217ENST00000548420 C8AP07357 584 aa15.55■□□□□ 0.08
PTCH1-217ENST00000548420 PSAPP07602 524 aa15.55■□□□□ 0.08
PTCH1-217ENST00000548420 OR1G1P47890 313 aa15.55■□□□□ 0.08
PTCH1-217ENST00000548420 PPM1LQ5SGD2 360 aa15.55■□□□□ 0.08
PTCH1-217ENST00000548420 LRCH2Q5VUJ6 765 aa15.55■□□□□ 0.08
PTCH1-217ENST00000548420 FAM160B1Q5W0V3 765 aa15.55■□□□□ 0.08
PTCH1-217ENST00000548420 PKN3Q6P5Z2 889 aa15.55■□□□□ 0.08
PTCH1-217ENST00000548420 PRSS55Q6UWB4 352 aaPredicted RBP15.55■□□□□ 0.08
PTCH1-217ENST00000548420 DIS3L2Q8IYB7 885 aaKnown RBP15.55■□□□□ 0.08
PTCH1-217ENST00000548420 FBXO18Q8NFZ0 1043 aa15.55■□□□□ 0.08
PTCH1-217ENST00000548420 RDM1Q8NG50 284 aa15.55■□□□□ 0.08
PTCH1-217ENST00000548420 SLC39A7Q92504 469 aa15.55■□□□□ 0.08
PTCH1-217ENST00000548420 GJA10Q969M2 543 aa15.55■□□□□ 0.08
PTCH1-217ENST00000548420 FAM20AQ96MK3 541 aa15.55■□□□□ 0.08
PTCH1-217ENST00000548420 NAP1L4Q99733 375 aaKnown RBP15.55■□□□□ 0.08
PTCH1-217ENST00000548420 UNC45AQ9H3U1 944 aa15.55■□□□□ 0.08
PTCH1-217ENST00000548420 BRMS1Q9HCU9 246 aa15.55■□□□□ 0.08
PTCH1-217ENST00000548420 TMEM9BQ9NQ34 198 aa15.55■□□□□ 0.08
PTCH1-217ENST00000548420 SCUBE2Q9NQ36 999 aa15.55■□□□□ 0.08
PTCH1-217ENST00000548420 TRPV5Q9NQA5 729 aa15.55■□□□□ 0.08
PTCH1-217ENST00000548420 DISC1Q9NRI5 854 aa15.55■□□□□ 0.08
PTCH1-217ENST00000548420 KCNH3Q9ULD8 1083 aa15.55■□□□□ 0.08
PTCH1-217ENST00000548420 BCLAF3A2AJT9 711 aaKnown RBP15.54■□□□□ 0.08
PTCH1-217ENST00000548420 PATE3B3GLJ2 98 aa15.54■□□□□ 0.08
PTCH1-217ENST00000548420 TBX3O15119 743 aa15.54■□□□□ 0.08
PTCH1-217ENST00000548420 GAS7O60861 476 aa15.54■□□□□ 0.08
PTCH1-217ENST00000548420 CCDC192P0DO97 292 aa15.54■□□□□ 0.08
PTCH1-217ENST00000548420 CEBPBP17676 345 aa15.54■□□□□ 0.08
PTCH1-217ENST00000548420 SFNP31947 248 aa15.54■□□□□ 0.08
PTCH1-217ENST00000548420 MCM2P49736 904 aa15.54■□□□□ 0.08
PTCH1-217ENST00000548420 DRP2Q13474 957 aa15.54■□□□□ 0.08
PTCH1-217ENST00000548420 TRIM29Q14134 588 aa15.54■□□□□ 0.08
PTCH1-217ENST00000548420 UAP1L1Q3KQV9 507 aa15.54■□□□□ 0.08
PTCH1-217ENST00000548420 PABPC1LQ4VXU2 614 aaKnown RBP15.54■□□□□ 0.08
PTCH1-217ENST00000548420 ZNF605Q86T29 641 aa15.54■□□□□ 0.08
PTCH1-217ENST00000548420 MDM1Q8TC05 714 aa15.54■□□□□ 0.08
PTCH1-217ENST00000548420 URGCPQ8TCY9 931 aa15.54■□□□□ 0.08
PTCH1-217ENST00000548420 HAS1Q92839 578 aa15.54■□□□□ 0.08
PTCH1-217ENST00000548420 TMX3Q96JJ7 454 aa15.54■□□□□ 0.08
PTCH1-217ENST00000548420 FAM193BQ96PV7 902 aaPredicted RBP15.54■□□□□ 0.08
PTCH1-217ENST00000548420 MAP7D2Q96T17 732 aa15.54■□□□□ 0.08
PTCH1-217ENST00000548420 TRMT61BQ9BVS5 477 aaKnown RBP15.54■□□□□ 0.08
PTCH1-217ENST00000548420 TEKT3Q9BXF9 490 aa15.54■□□□□ 0.08
PTCH1-217ENST00000548420 ATG2BQ96BY7 2078 aa15.53■□□□□ 0.08
PTCH1-217ENST00000548420 ARNTLO00327 626 aa15.53■□□□□ 0.08
PTCH1-217ENST00000548420 ARHGAP6O43182 974 aa15.53■□□□□ 0.08
PTCH1-217ENST00000548420 ADAM12O43184 909 aa15.53■□□□□ 0.08
PTCH1-217ENST00000548420 ZNF862O60290 1169 aa15.53■□□□□ 0.08
PTCH1-217ENST00000548420 CCNT1O60563 726 aaKnown RBP15.53■□□□□ 0.08
PTCH1-217ENST00000548420 GDI1P31150 447 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms