RNA–Protein interactions for RNA: ENST00000548232.1

NR4A1-209, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best) BASIC

Gene NR4A1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-209ENST00000548232 SP9P0CG40 484 aa14.38□□□□□ -0.11
NR4A1-209ENST00000548232 CCT6AP40227 531 aaKnown RBP14.38□□□□□ -0.11
NR4A1-209ENST00000548232 NAMPTP43490 491 aa14.38□□□□□ -0.11
NR4A1-209ENST00000548232 CLCNKBP51801 687 aa14.38□□□□□ -0.11
NR4A1-209ENST00000548232 NBR1Q14596 966 aa14.38□□□□□ -0.11
NR4A1-209ENST00000548232 PPP2R5AQ15172 486 aa14.38□□□□□ -0.11
NR4A1-209ENST00000548232 SLC44A4Q53GD3 710 aa14.38□□□□□ -0.11
NR4A1-209ENST00000548232 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.38□□□□□ -0.11
NR4A1-209ENST00000548232 MTSS1LQ765P7 747 aa14.38□□□□□ -0.11
NR4A1-209ENST00000548232 KIAA2013Q8IYS2 634 aa14.38□□□□□ -0.11
NR4A1-209ENST00000548232 ING5Q8WYH8 240 aa14.38□□□□□ -0.11
NR4A1-209ENST00000548232 KXD1Q9BQD3 176 aa14.38□□□□□ -0.11
NR4A1-209ENST00000548232 FOXP1Q9H334 677 aaPredicted RBP14.38□□□□□ -0.11
NR4A1-209ENST00000548232 HCFC1R1Q9NWW0 138 aa14.38□□□□□ -0.11
NR4A1-209ENST00000548232 CDY1Q9Y6F8 540 aa14.38□□□□□ -0.11
NR4A1-209ENST00000548232 K7ERI5 159 aa14.37□□□□□ -0.11
NR4A1-209ENST00000548232 EDN1P05305 212 aa14.37□□□□□ -0.11
NR4A1-209ENST00000548232 OR52Z1P0C646 297 aa14.37□□□□□ -0.11
NR4A1-209ENST00000548232 GLULP15104 373 aa14.37□□□□□ -0.11
NR4A1-209ENST00000548232 RPA1P27694 616 aa14.37□□□□□ -0.11
NR4A1-209ENST00000548232 EFNA5P52803 228 aa14.37□□□□□ -0.11
NR4A1-209ENST00000548232 ARPP19P56211 112 aa14.37□□□□□ -0.11
NR4A1-209ENST00000548232 STARD6P59095 220 aa14.37□□□□□ -0.11
NR4A1-209ENST00000548232 GNL2Q13823 731 aaKnown RBP14.37□□□□□ -0.11
NR4A1-209ENST00000548232 RAB33AQ14088 237 aa14.37□□□□□ -0.11
NR4A1-209ENST00000548232 UBXN2BQ14CS0 331 aa14.37□□□□□ -0.11
NR4A1-209ENST00000548232 NAB2Q15742 525 aa14.37□□□□□ -0.11
NR4A1-209ENST00000548232 DCAF4L1Q3SXM0 396 aa14.37□□□□□ -0.11
NR4A1-209ENST00000548232 NT5DC1Q5TFE4 455 aa14.37□□□□□ -0.11
NR4A1-209ENST00000548232 ATF7IP2Q5U623 682 aa14.37□□□□□ -0.11
NR4A1-209ENST00000548232 PJA1Q8NG27 643 aa14.37□□□□□ -0.11
NR4A1-209ENST00000548232 MCRS1Q96EZ8 462 aa14.37□□□□□ -0.11
NR4A1-209ENST00000548232 CCDC113Q9H0I3 377 aa14.37□□□□□ -0.11
NR4A1-209ENST00000548232 SPATA6Q9NWH7 488 aaPredicted RBP14.37□□□□□ -0.11
NR4A1-209ENST00000548232 CHMP5Q9NZZ3 219 aa14.37□□□□□ -0.11
NR4A1-209ENST00000548232 DLGAP2Q9P1A6 1054 aa14.37□□□□□ -0.11
NR4A1-209ENST00000548232 DAXXQ9UER7 740 aaPredicted RBP14.37□□□□□ -0.11
NR4A1-209ENST00000548232 MRPS23Q9Y3D9 190 aaKnown RBP14.37□□□□□ -0.11
NR4A1-209ENST00000548232 ARID2Q68CP9 1835 aa14.36□□□□□ -0.11
NR4A1-209ENST00000548232 FAM170BA6NMN3 283 aa14.36□□□□□ -0.11
NR4A1-209ENST00000548232 CCDC169A6NNP5 214 aa14.36□□□□□ -0.11
NR4A1-209ENST00000548232 TRAPPC3O43617 180 aa14.36□□□□□ -0.11
NR4A1-209ENST00000548232 CD72P21854 359 aa14.36□□□□□ -0.11
NR4A1-209ENST00000548232 FGFR3P22607 806 aa14.36□□□□□ -0.11
NR4A1-209ENST00000548232 TKTP29401 623 aaKnown RBP14.36□□□□□ -0.11
NR4A1-209ENST00000548232 HOXA9P31269 272 aa14.36□□□□□ -0.11
NR4A1-209ENST00000548232 BRCC3P46736 316 aa14.36□□□□□ -0.11
NR4A1-209ENST00000548232 OSTNP61366 133 aa14.36□□□□□ -0.11
NR4A1-209ENST00000548232 UVSSAQ2YD98 709 aa14.36□□□□□ -0.11
NR4A1-209ENST00000548232 PABPC1LQ4VXU2 614 aaKnown RBP14.36□□□□□ -0.11
NR4A1-209ENST00000548232 MCTP1Q6DN14 999 aa14.36□□□□□ -0.11
NR4A1-209ENST00000548232 ZC3H14Q6PJT7 736 aaKnown RBP14.36□□□□□ -0.11
NR4A1-209ENST00000548232 RSPO2Q6UXX9 243 aaPredicted RBP14.36□□□□□ -0.11
NR4A1-209ENST00000548232 APBB1IPQ7Z5R6 666 aaPredicted RBP14.36□□□□□ -0.11
NR4A1-209ENST00000548232 BCO2Q9BYV7 579 aa14.36□□□□□ -0.11
NR4A1-209ENST00000548232 BHMT2Q9H2M3 363 aa14.36□□□□□ -0.11
NR4A1-209ENST00000548232 GOLGA2P5Q9HBQ8 144 aa14.36□□□□□ -0.11
NR4A1-209ENST00000548232 DNMT3BQ9UBC3 853 aaKnown RBP14.36□□□□□ -0.11
NR4A1-209ENST00000548232 KIAA1024Q9UPX6 916 aa14.36□□□□□ -0.11
NR4A1-209ENST00000548232 MTF2Q9Y483 593 aaPredicted RBP14.36□□□□□ -0.11
NR4A1-209ENST00000548232 TDRD15B5MCY1 1934 aaKnown RBP14.36□□□□□ -0.11
NR4A1-209ENST00000548232 DMDP11532 3685 aa14.36□□□□□ -0.11
NR4A1-209ENST00000548232 SMIM28A0A1B0GU29 152 aa14.35□□□□□ -0.11
NR4A1-209ENST00000548232 KANSL1LA0AUZ9 987 aa14.35□□□□□ -0.11
NR4A1-209ENST00000548232 ELF1P32519 619 aa14.35□□□□□ -0.11
NR4A1-209ENST00000548232 YARSP54577 528 aaKnown RBP14.35□□□□□ -0.11
NR4A1-209ENST00000548232 NUCB2P80303 420 aa14.35□□□□□ -0.11
NR4A1-209ENST00000548232 MLF2Q15773 248 aaPredicted RBP14.35□□□□□ -0.11
NR4A1-209ENST00000548232 ECM1Q16610 540 aa14.35□□□□□ -0.11
NR4A1-209ENST00000548232 TTC38Q5R3I4 469 aa14.35□□□□□ -0.11
NR4A1-209ENST00000548232 ERMP1Q7Z2K6 904 aa14.35□□□□□ -0.11
NR4A1-209ENST00000548232 DCLK2Q8N568 766 aa14.35□□□□□ -0.11
NR4A1-209ENST00000548232 KIFAP3Q92845 792 aa14.35□□□□□ -0.11
NR4A1-209ENST00000548232 UROC1Q96N76 676 aa14.35□□□□□ -0.11
NR4A1-209ENST00000548232 PPP1R10Q96QC0 940 aaKnown RBP14.35□□□□□ -0.11
NR4A1-209ENST00000548232 TCHPQ9BT92 498 aa14.35□□□□□ -0.11
NR4A1-209ENST00000548232 MTRRQ9UBK8 725 aa14.35□□□□□ -0.11
NR4A1-209ENST00000548232 LRWD1Q9UFC0 647 aa14.35□□□□□ -0.11
NR4A1-209ENST00000548232 RIF1Q5UIP0 2472 aaKnown RBP14.35□□□□□ -0.11
NR4A1-209ENST00000548232 SPTBN4Q9H254 2564 aa14.34□□□□□ -0.11
NR4A1-209ENST00000548232 PRRG1O14668 218 aa14.34□□□□□ -0.11
NR4A1-209ENST00000548232 LAMTOR5O43504 91 aa14.34□□□□□ -0.11
NR4A1-209ENST00000548232 PEX3P56589 373 aa14.34□□□□□ -0.11
NR4A1-209ENST00000548232 PFKPQ01813 784 aa14.34□□□□□ -0.11
NR4A1-209ENST00000548232 PRKCQQ04759 706 aa14.34□□□□□ -0.11
NR4A1-209ENST00000548232 CSTF1Q05048 431 aaKnown RBP14.34□□□□□ -0.11
NR4A1-209ENST00000548232 UPP1Q16831 310 aa14.34□□□□□ -0.11
NR4A1-209ENST00000548232 HAUS3Q68CZ6 603 aa14.34□□□□□ -0.11
NR4A1-209ENST00000548232 CD300LGQ6UXG3 332 aa14.34□□□□□ -0.11
NR4A1-209ENST00000548232 ANKS3Q6ZW76 656 aa14.34□□□□□ -0.11
NR4A1-209ENST00000548232 NPAS3Q8IXF0 933 aa14.34□□□□□ -0.11
NR4A1-209ENST00000548232 CCDC94Q9BW85 323 aaPredicted RBP14.34□□□□□ -0.11
NR4A1-209ENST00000548232 DDX19AQ9NUU7 478 aaKnown RBP14.34□□□□□ -0.11
NR4A1-209ENST00000548232 KCNH3Q9ULD8 1083 aa14.34□□□□□ -0.11
NR4A1-209ENST00000548232 TNFSF13BQ9Y275 285 aa14.34□□□□□ -0.11
NR4A1-209ENST00000548232 BACE2Q9Y5Z0 518 aa14.34□□□□□ -0.11
NR4A1-209ENST00000548232 LRG1P02750 347 aa14.33□□□□□ -0.12
NR4A1-209ENST00000548232 RHOP08100 348 aa14.33□□□□□ -0.12
NR4A1-209ENST00000548232 HARSP12081 509 aaKnown RBP14.33□□□□□ -0.12
NR4A1-209ENST00000548232 PTPN2P17706 415 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms