RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 TSKSQ9UJT2 592 aa13.35□□□□□ -0.27
RAB5B-204ENST00000548068 PHF24Q9UPV7 400 aa13.35□□□□□ -0.27
RAB5B-204ENST00000548068 PIN4Q9Y237 131 aaKnown RBP13.35□□□□□ -0.27
RAB5B-204ENST00000548068 CDY2AQ9Y6F7 541 aa13.35□□□□□ -0.27
RAB5B-204ENST00000548068 MROH7Q68CQ1 1323 aa13.35□□□□□ -0.27
RAB5B-204ENST00000548068 A0A1W2PQ45 241 aaPredicted RBP13.34□□□□□ -0.27
RAB5B-204ENST00000548068 A0A1W2PQY0 241 aa13.34□□□□□ -0.27
RAB5B-204ENST00000548068 USP27XA6NNY8 438 aa13.34□□□□□ -0.27
RAB5B-204ENST00000548068 LCA5LO95447 670 aa13.34□□□□□ -0.27
RAB5B-204ENST00000548068 CXCL8P10145 99 aa13.34□□□□□ -0.27
RAB5B-204ENST00000548068 FGFR4P22455 802 aa13.34□□□□□ -0.27
RAB5B-204ENST00000548068 TBXAS1P24557 533 aaPredicted RBP13.34□□□□□ -0.27
RAB5B-204ENST00000548068 HOXA11P31270 313 aaPredicted RBP13.34□□□□□ -0.27
RAB5B-204ENST00000548068 OSTNP61366 133 aa13.34□□□□□ -0.27
RAB5B-204ENST00000548068 TFAMQ00059 246 aaKnown RBP13.34□□□□□ -0.27
RAB5B-204ENST00000548068 TRPC3Q13507 836 aa13.34□□□□□ -0.27
RAB5B-204ENST00000548068 ARHGAP29Q52LW3 1261 aa13.34□□□□□ -0.27
RAB5B-204ENST00000548068 HGSNATQ68CP4 663 aa13.34□□□□□ -0.27
RAB5B-204ENST00000548068 LMBRD2Q68DH5 695 aaPredicted RBP13.34□□□□□ -0.27
RAB5B-204ENST00000548068 GJB7Q6PEY0 223 aa13.34□□□□□ -0.27
RAB5B-204ENST00000548068 KIAA1328Q86T90 577 aa13.34□□□□□ -0.27
RAB5B-204ENST00000548068 CDR2LQ86X02 465 aaPredicted RBP13.34□□□□□ -0.27
RAB5B-204ENST00000548068 ARHGEF19Q8IW93 802 aa13.34□□□□□ -0.27
RAB5B-204ENST00000548068 REXO1L1PQ8IX06 675 aa13.34□□□□□ -0.27
RAB5B-204ENST00000548068 TAF4BQ92750 862 aa13.34□□□□□ -0.27
RAB5B-204ENST00000548068 SEMA4DQ92854 862 aa13.34□□□□□ -0.27
RAB5B-204ENST00000548068 TSGA10Q9BZW7 698 aa13.34□□□□□ -0.27
RAB5B-204ENST00000548068 SENP6Q9GZR1 1112 aaPredicted RBP13.34□□□□□ -0.27
RAB5B-204ENST00000548068 DERAQ9Y315 318 aa13.34□□□□□ -0.27
RAB5B-204ENST00000548068 PTPRJQ12913 1337 aa13.34□□□□□ -0.27
RAB5B-204ENST00000548068 DNM1LO00429 736 aa13.33□□□□□ -0.28
RAB5B-204ENST00000548068 GPR182O15218 404 aa13.33□□□□□ -0.28
RAB5B-204ENST00000548068 EVI5O60447 810 aa13.33□□□□□ -0.28
RAB5B-204ENST00000548068 RPS6KA5O75582 802 aa13.33□□□□□ -0.28
RAB5B-204ENST00000548068 WNT7BP56706 349 aa13.33□□□□□ -0.28
RAB5B-204ENST00000548068 C1QTNF8P60827 252 aa13.33□□□□□ -0.28
RAB5B-204ENST00000548068 ARID5AQ03989 594 aa13.33□□□□□ -0.28
RAB5B-204ENST00000548068 NCOA4Q13772 614 aa13.33□□□□□ -0.28
RAB5B-204ENST00000548068 TMEM132DQ14C87 1099 aa13.33□□□□□ -0.28
RAB5B-204ENST00000548068 ARHGAP44Q17R89 818 aa13.33□□□□□ -0.28
RAB5B-204ENST00000548068 C10orf76Q5T2E6 689 aa13.33□□□□□ -0.28
RAB5B-204ENST00000548068 ZNF662Q6ZS27 426 aa13.33□□□□□ -0.28
RAB5B-204ENST00000548068 NYAP1Q6ZVC0 841 aa13.33□□□□□ -0.28
RAB5B-204ENST00000548068 TRAPPC11Q7Z392 1133 aa13.33□□□□□ -0.28
RAB5B-204ENST00000548068 IRF2BP2Q7Z5L9 587 aa13.33□□□□□ -0.28
RAB5B-204ENST00000548068 HACE1Q8IYU2 909 aa13.33□□□□□ -0.28
RAB5B-204ENST00000548068 CEP120Q8N960 986 aa13.33□□□□□ -0.28
RAB5B-204ENST00000548068 ACRBPQ8NEB7 543 aa13.33□□□□□ -0.28
RAB5B-204ENST00000548068 OR5B17Q8NGF7 314 aa13.33□□□□□ -0.28
RAB5B-204ENST00000548068 SH3TC2Q8TF17 1288 aa13.33□□□□□ -0.28
RAB5B-204ENST00000548068 SHC3Q92529 594 aa13.33□□□□□ -0.28
RAB5B-204ENST00000548068 DHX38Q92620 1227 aaKnown RBP13.33□□□□□ -0.28
RAB5B-204ENST00000548068 C16orf45Q96MC5 204 aaPredicted RBP13.33□□□□□ -0.28
RAB5B-204ENST00000548068 MTMR12Q9C0I1 747 aa13.33□□□□□ -0.28
RAB5B-204ENST00000548068 HAUS4Q9H6D7 363 aa13.33□□□□□ -0.28
RAB5B-204ENST00000548068 STARD7Q9NQZ5 370 aa13.33□□□□□ -0.28
RAB5B-204ENST00000548068 CHST12Q9NRB3 414 aa13.33□□□□□ -0.28
RAB5B-204ENST00000548068 AJAP1Q9UKB5 411 aaPredicted RBP13.33□□□□□ -0.28
RAB5B-204ENST00000548068 R3HCC1Q9Y3T6 440 aaKnown RBP13.33□□□□□ -0.28
RAB5B-204ENST00000548068 C2CD2Q9Y426 696 aa13.33□□□□□ -0.28
RAB5B-204ENST00000548068 SQORQ9Y6N5 450 aa13.33□□□□□ -0.28
RAB5B-204ENST00000548068 PDCD11Q14690 1871 aaKnown RBP13.33□□□□□ -0.28
RAB5B-204ENST00000548068 GRIN2DO15399 1336 aa13.33□□□□□ -0.28
RAB5B-204ENST00000548068 LACTBL1A8MY62 500 aa13.32□□□□□ -0.28
RAB5B-204ENST00000548068 RBAK-RBAKDNI3L0D1 243 aa13.32□□□□□ -0.28
RAB5B-204ENST00000548068 KRT86O43790 486 aa13.32□□□□□ -0.28
RAB5B-204ENST00000548068 CLSTN1O94985 981 aa13.32□□□□□ -0.28
RAB5B-204ENST00000548068 VNN1O95497 513 aa13.32□□□□□ -0.28
RAB5B-204ENST00000548068 PLEKP08567 350 aaPredicted RBP13.32□□□□□ -0.28
RAB5B-204ENST00000548068 TNNT1P13805 278 aa13.32□□□□□ -0.28
RAB5B-204ENST00000548068 THPOP40225 353 aa13.32□□□□□ -0.28
RAB5B-204ENST00000548068 YWHAEP62258 255 aaKnown RBP13.32□□□□□ -0.28
RAB5B-204ENST00000548068 NOP14P78316 857 aaKnown RBP13.32□□□□□ -0.28
RAB5B-204ENST00000548068 MGAT3Q09327 533 aa13.32□□□□□ -0.28
RAB5B-204ENST00000548068 BMS1Q14692 1282 aaKnown RBP13.32□□□□□ -0.28
RAB5B-204ENST00000548068 SLC18A3Q16572 532 aa13.32□□□□□ -0.28
RAB5B-204ENST00000548068 SGSM1Q2NKQ1 1148 aa13.32□□□□□ -0.28
RAB5B-204ENST00000548068 FAM26DQ5JW98 314 aa13.32□□□□□ -0.28
RAB5B-204ENST00000548068 FAM228AQ86W67 206 aa13.32□□□□□ -0.28
RAB5B-204ENST00000548068 USP38Q8NB14 1042 aa13.32□□□□□ -0.28
RAB5B-204ENST00000548068 SLC43A3Q8NBI5 491 aa13.32□□□□□ -0.28
RAB5B-204ENST00000548068 HELQQ8TDG4 1101 aa13.32□□□□□ -0.28
RAB5B-204ENST00000548068 TMEM40Q8WWA1 233 aa13.32□□□□□ -0.28
RAB5B-204ENST00000548068 FAXDC2Q96IV6 333 aa13.32□□□□□ -0.28
RAB5B-204ENST00000548068 IFIH1Q9BYX4 1025 aaKnown RBP13.32□□□□□ -0.28
RAB5B-204ENST00000548068 UNC93B1Q9H1C4 597 aa13.32□□□□□ -0.28
RAB5B-204ENST00000548068 PAK6Q9NQU5 681 aaPredicted RBP13.32□□□□□ -0.28
RAB5B-204ENST00000548068 ITGA11Q9UKX5 1188 aa13.32□□□□□ -0.28
RAB5B-204ENST00000548068 NOC2LQ9Y3T9 749 aaKnown RBP13.32□□□□□ -0.28
RAB5B-204ENST00000548068 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.32□□□□□ -0.28
RAB5B-204ENST00000548068 ATP8B3O60423 1300 aa13.32□□□□□ -0.28
RAB5B-204ENST00000548068 ARVCFO00192 962 aa13.31□□□□□ -0.28
RAB5B-204ENST00000548068 XPOTO43592 962 aaKnown RBP13.31□□□□□ -0.28
RAB5B-204ENST00000548068 LRRN2O75325 713 aa13.31□□□□□ -0.28
RAB5B-204ENST00000548068 ASS1P00966 412 aaKnown RBP13.31□□□□□ -0.28
RAB5B-204ENST00000548068 CTSHP09668 335 aa13.31□□□□□ -0.28
RAB5B-204ENST00000548068 ATICP31939 592 aa13.31□□□□□ -0.28
RAB5B-204ENST00000548068 VAV2P52735 878 aa13.31□□□□□ -0.28
RAB5B-204ENST00000548068 BPIFB4P59827 614 aa13.31□□□□□ -0.28
RAB5B-204ENST00000548068 PTK2Q05397 1052 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms