RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 CDC25AP30304 524 aa22.36■■□□□ 1.17
SSH1-207ENST00000547862 DDX27Q96GQ7 796 aaKnown RBP22.36■■□□□ 1.17
SSH1-207ENST00000547862 SH2B1Q9NRF2 756 aaPredicted RBP22.36■■□□□ 1.17
SSH1-207ENST00000547862 MTRRQ9UBK8 725 aa22.36■■□□□ 1.17
SSH1-207ENST00000547862 CDH7Q9ULB5 785 aa22.36■■□□□ 1.17
SSH1-207ENST00000547862 FGFR3P22607 806 aa22.35■■□□□ 1.17
SSH1-207ENST00000547862 NPTX2P47972 431 aa22.35■■□□□ 1.17
SSH1-207ENST00000547862 TOB1P50616 345 aaPredicted RBP22.35■■□□□ 1.17
SSH1-207ENST00000547862 SOX4Q06945 474 aaPredicted RBP22.35■■□□□ 1.17
SSH1-207ENST00000547862 DCLRE1AQ6PJP8 1040 aa22.35■■□□□ 1.17
SSH1-207ENST00000547862 RSPO2Q6UXX9 243 aaPredicted RBP22.35■■□□□ 1.17
SSH1-207ENST00000547862 FGF13Q92913 245 aa22.35■■□□□ 1.17
SSH1-207ENST00000547862 KXD1Q9BQD3 176 aa22.35■■□□□ 1.17
SSH1-207ENST00000547862 TARS2Q9BW92 718 aaKnown RBP22.35■■□□□ 1.17
SSH1-207ENST00000547862 MRPL4Q9BYD3 311 aaKnown RBP22.35■■□□□ 1.17
SSH1-207ENST00000547862 FOXQ1Q9C009 403 aa22.35■■□□□ 1.17
SSH1-207ENST00000547862 KMT5AQ9NQR1 393 aa22.35■■□□□ 1.17
SSH1-207ENST00000547862 TNFSF13BQ9Y275 285 aa22.35■■□□□ 1.17
SSH1-207ENST00000547862 DMDP11532 3685 aa22.35■■□□□ 1.17
SSH1-207ENST00000547862 TMEM189-UBE2V1I3L0A0 370 aa22.34■■□□□ 1.17
SSH1-207ENST00000547862 HOXA9P31269 272 aa22.34■■□□□ 1.17
SSH1-207ENST00000547862 GRM5P41594 1212 aa22.34■■□□□ 1.17
SSH1-207ENST00000547862 ARPP19P56211 112 aa22.34■■□□□ 1.17
SSH1-207ENST00000547862 RAD51AP2Q09MP3 1159 aa22.34■■□□□ 1.17
SSH1-207ENST00000547862 RAB33AQ14088 237 aa22.34■■□□□ 1.17
SSH1-207ENST00000547862 UPP1Q16831 310 aa22.34■■□□□ 1.17
SSH1-207ENST00000547862 KRT79Q5XKE5 535 aa22.34■■□□□ 1.17
SSH1-207ENST00000547862 MCTP1Q6DN14 999 aa22.34■■□□□ 1.17
SSH1-207ENST00000547862 DAW1Q8N136 415 aa22.34■■□□□ 1.17
SSH1-207ENST00000547862 IGSF22Q8N9C0 903 aa22.34■■□□□ 1.17
SSH1-207ENST00000547862 UROC1Q96N76 676 aa22.34■■□□□ 1.17
SSH1-207ENST00000547862 ACO2Q99798 780 aaKnown RBP22.34■■□□□ 1.17
SSH1-207ENST00000547862 TCHPQ9BT92 498 aa22.34■■□□□ 1.17
SSH1-207ENST00000547862 TOPORSQ9NS56 1045 aaPredicted RBP22.34■■□□□ 1.17
SSH1-207ENST00000547862 ANKFY1Q9P2R3 1169 aa22.34■■□□□ 1.17
SSH1-207ENST00000547862 DNM3Q9UQ16 869 aa22.34■■□□□ 1.17
SSH1-207ENST00000547862 PATJQ8NI35 1801 aa22.34■■□□□ 1.17
SSH1-207ENST00000547862 SMIM28A0A1B0GU29 152 aa22.33■■□□□ 1.17
SSH1-207ENST00000547862 PODXLO00592 558 aa22.33■■□□□ 1.17
SSH1-207ENST00000547862 SLC16A4O15374 487 aa22.33■■□□□ 1.17
SSH1-207ENST00000547862 PABPC1LQ4VXU2 614 aaKnown RBP22.33■■□□□ 1.17
SSH1-207ENST00000547862 TAS1R3Q7RTX0 852 aa22.33■■□□□ 1.17
SSH1-207ENST00000547862 KCNK18Q7Z418 384 aa22.33■■□□□ 1.17
SSH1-207ENST00000547862 ADSSL1Q8N142 457 aa22.33■■□□□ 1.17
SSH1-207ENST00000547862 KCNG4Q8TDN1 519 aa22.33■■□□□ 1.17
SSH1-207ENST00000547862 SNX27Q96L92 541 aa22.33■■□□□ 1.17
SSH1-207ENST00000547862 DRC1Q96MC2 740 aa22.33■■□□□ 1.17
SSH1-207ENST00000547862 ZFP37Q9Y6Q3 630 aaPredicted RBP22.33■■□□□ 1.17
SSH1-207ENST00000547862 FAM186AA6NE01 2351 aa22.33■■□□□ 1.16
SSH1-207ENST00000547862 SFI1A8K8P3 1242 aa22.32■■□□□ 1.16
SSH1-207ENST00000547862 TRAPPC3O43617 180 aa22.32■■□□□ 1.16
SSH1-207ENST00000547862 LRRN2O75325 713 aa22.32■■□□□ 1.16
SSH1-207ENST00000547862 U2AF2P26368 475 aaKnown RBP eCLIP22.32■■□□□ 1.16
SSH1-207ENST00000547862 GPC5P78333 572 aa22.32■■□□□ 1.16
SSH1-207ENST00000547862 IL17AQ16552 155 aa22.32■■□□□ 1.16
SSH1-207ENST00000547862 ERICH6BQ5W0A0 696 aa22.32■■□□□ 1.16
SSH1-207ENST00000547862 CD300LGQ6UXG3 332 aa22.32■■□□□ 1.16
SSH1-207ENST00000547862 ANKS3Q6ZW76 656 aa22.32■■□□□ 1.16
SSH1-207ENST00000547862 MTSS1LQ765P7 747 aa22.32■■□□□ 1.16
SSH1-207ENST00000547862 PLIN2Q99541 437 aa22.32■■□□□ 1.16
SSH1-207ENST00000547862 KIF2CQ99661 725 aa22.32■■□□□ 1.16
SSH1-207ENST00000547862 SLC2A4RGQ9NR83 387 aa22.32■■□□□ 1.16
SSH1-207ENST00000547862 DNMT3BQ9UBC3 853 aaKnown RBP22.32■■□□□ 1.16
SSH1-207ENST00000547862 SIT1Q9Y3P8 196 aa22.32■■□□□ 1.16
SSH1-207ENST00000547862 STK24Q9Y6E0 443 aa22.32■■□□□ 1.16
SSH1-207ENST00000547862 R4GN57 208 aa22.32■■□□□ 1.16
SSH1-207ENST00000547862 ROR1Q01973 937 aa22.31■■□□□ 1.16
SSH1-207ENST00000547862 MAPK7Q13164 816 aa22.31■■□□□ 1.16
SSH1-207ENST00000547862 SNW1Q13573 536 aaKnown RBP22.31■■□□□ 1.16
SSH1-207ENST00000547862 SEZ6Q53EL9 994 aa22.31■■□□□ 1.16
SSH1-207ENST00000547862 RINT1Q6NUQ1 792 aa22.31■■□□□ 1.16
SSH1-207ENST00000547862 DTHD1Q6ZMT9 781 aa22.31■■□□□ 1.16
SSH1-207ENST00000547862 NPAS3Q8IXF0 933 aa22.31■■□□□ 1.16
SSH1-207ENST00000547862 C18orf25Q96B23 403 aaPredicted RBP22.31■■□□□ 1.16
SSH1-207ENST00000547862 ZMAT2Q96NC0 199 aaKnown RBP22.31■■□□□ 1.16
SSH1-207ENST00000547862 ARHGAP28Q9P2N2 729 aa22.31■■□□□ 1.16
SSH1-207ENST00000547862 MRPS23Q9Y3D9 190 aaKnown RBP22.31■■□□□ 1.16
SSH1-207ENST00000547862 PTPRZ1P23471 2315 aaPredicted RBP22.31■■□□□ 1.16
SSH1-207ENST00000547862 PRRG1O14668 218 aa22.3■■□□□ 1.16
SSH1-207ENST00000547862 LRG1P02750 347 aa22.3■■□□□ 1.16
SSH1-207ENST00000547862 MATR3P43243 847 aaKnown RBP eCLIP22.3■■□□□ 1.16
SSH1-207ENST00000547862 PDIA5Q14554 519 aa22.3■■□□□ 1.16
SSH1-207ENST00000547862 VARS2Q5ST30 1063 aaKnown RBP22.3■■□□□ 1.16
SSH1-207ENST00000547862 MPZL3Q6UWV2 235 aa22.3■■□□□ 1.16
SSH1-207ENST00000547862 PJA1Q8NG27 643 aa22.3■■□□□ 1.16
SSH1-207ENST00000547862 ZBTB45Q96K62 511 aaPredicted RBP22.3■■□□□ 1.16
SSH1-207ENST00000547862 ACAP3Q96P50 834 aa22.3■■□□□ 1.16
SSH1-207ENST00000547862 TMEM134Q9H6X4 195 aa22.3■■□□□ 1.16
SSH1-207ENST00000547862 SLC38A7Q9NVC3 462 aa22.3■■□□□ 1.16
SSH1-207ENST00000547862 NUB1Q9Y5A7 615 aa22.3■■□□□ 1.16
SSH1-207ENST00000547862 RIF1Q5UIP0 2472 aaKnown RBP22.3■■□□□ 1.16
SSH1-207ENST00000547862 FANCMQ8IYD8 2048 aa22.3■■□□□ 1.16
SSH1-207ENST00000547862 MCF2P10911 925 aa22.29■■□□□ 1.16
SSH1-207ENST00000547862 CEBPBP17676 345 aa22.29■■□□□ 1.16
SSH1-207ENST00000547862 CACNB1Q02641 598 aaPredicted RBP22.29■■□□□ 1.16
SSH1-207ENST00000547862 STRN3Q13033 797 aa22.29■■□□□ 1.16
SSH1-207ENST00000547862 UBXN2BQ14CS0 331 aa22.29■■□□□ 1.16
SSH1-207ENST00000547862 PHLDB3Q6NSJ2 640 aa22.29■■□□□ 1.16
SSH1-207ENST00000547862 TMEM130Q8N3G9 435 aa22.29■■□□□ 1.16
SSH1-207ENST00000547862 MCRS1Q96EZ8 462 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms