RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 TCF20Q9UGU0 1960 aaKnown RBP12.89□□□□□ -0.35
RAB5C-204ENST00000547517 A0A0B4J269 797 aa12.89□□□□□ -0.35
RAB5C-204ENST00000547517 ACTN4O43707 911 aaKnown RBP12.89□□□□□ -0.35
RAB5C-204ENST00000547517 FAM189A1O60320 539 aa12.89□□□□□ -0.35
RAB5C-204ENST00000547517 B3GAT3O94766 335 aa12.89□□□□□ -0.35
RAB5C-204ENST00000547517 PRPF6O94906 941 aaKnown RBP12.89□□□□□ -0.35
RAB5C-204ENST00000547517 EFEMP2O95967 443 aa12.89□□□□□ -0.35
RAB5C-204ENST00000547517 CNPP09543 421 aaKnown RBP12.89□□□□□ -0.35
RAB5C-204ENST00000547517 KCNE1P15382 129 aa12.89□□□□□ -0.35
RAB5C-204ENST00000547517 PPP2R3AQ06190 1150 aa12.89□□□□□ -0.35
RAB5C-204ENST00000547517 SPAG1Q07617 926 aa12.89□□□□□ -0.35
RAB5C-204ENST00000547517 SMAD4Q13485 552 aaKnown RBP12.89□□□□□ -0.35
RAB5C-204ENST00000547517 ENOX2Q16206 610 aaKnown RBP12.89□□□□□ -0.35
RAB5C-204ENST00000547517 KYAT1Q16773 422 aa12.89□□□□□ -0.35
RAB5C-204ENST00000547517 SYCP3Q8IZU3 236 aa12.89□□□□□ -0.35
RAB5C-204ENST00000547517 FSIP1Q8NA03 581 aa12.89□□□□□ -0.35
RAB5C-204ENST00000547517 GLIS3Q8NEA6 775 aa12.89□□□□□ -0.35
RAB5C-204ENST00000547517 POMGNT1Q8WZA1 660 aa12.89□□□□□ -0.35
RAB5C-204ENST00000547517 CASP10Q92851 521 aa12.89□□□□□ -0.35
RAB5C-204ENST00000547517 C18orf25Q96B23 403 aaPredicted RBP12.89□□□□□ -0.35
RAB5C-204ENST00000547517 MSLNLQ96KJ4 702 aa12.89□□□□□ -0.35
RAB5C-204ENST00000547517 UROC1Q96N76 676 aa12.89□□□□□ -0.35
RAB5C-204ENST00000547517 C7orf25Q9BPX7 421 aa12.89□□□□□ -0.35
RAB5C-204ENST00000547517 STRA6Q9BX79 667 aa12.89□□□□□ -0.35
RAB5C-204ENST00000547517 EMILIN2Q9BXX0 1053 aa12.89□□□□□ -0.35
RAB5C-204ENST00000547517 RPF1Q9H9Y2 349 aaKnown RBP12.89□□□□□ -0.35
RAB5C-204ENST00000547517 TUBGCP4Q9UGJ1 667 aa12.89□□□□□ -0.35
RAB5C-204ENST00000547517 HPSEQ9Y251 543 aa12.89□□□□□ -0.35
RAB5C-204ENST00000547517 PCDHB13Q9Y5F0 798 aa12.89□□□□□ -0.35
RAB5C-204ENST00000547517 TCHHQ07283 1943 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 GRXCR2A6NFK2 248 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 PODXLO00592 558 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 MBTPS2O43462 519 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 SLFN14P0C7P3 912 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 EPCAMP16422 314 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 IGFBP6P24592 240 aaPredicted RBP12.88□□□□□ -0.35
RAB5C-204ENST00000547517 SYKP43405 635 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 ACOT2P49753 483 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 NDUFA8P51970 172 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 DSG1Q02413 1049 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 CUL4BQ13620 913 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 KCNC3Q14003 757 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 UPP1Q16831 310 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 USP41Q3LFD5 358 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 PUS10Q3MIT2 529 aaKnown RBP12.88□□□□□ -0.35
RAB5C-204ENST00000547517 RTP2Q5QGT7 225 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 FAM26FQ5R3K3 315 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 SLFN12LQ6IEE8 588 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 ANKRD54Q6NXT1 300 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 CNNM4Q6P4Q7 775 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 STXBP4Q6ZWJ1 553 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 UNC13DQ70J99 1090 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 CEP57Q86XR8 500 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 SMRP1Q8NCR6 262 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 C3orf58Q8NDZ4 430 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 RIN2Q8WYP3 895 aaPredicted RBP12.88□□□□□ -0.35
RAB5C-204ENST00000547517 FAM212AQ96EL1 285 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 KIF12Q96FN5 646 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 KLHL5Q96PQ7 755 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 APOL5Q9BWW9 433 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 GOLPH3LQ9H4A5 285 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 PLEKHA5Q9HAU0 1116 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 AGO2Q9UKV8 859 aaKnown RBP12.88□□□□□ -0.35
RAB5C-204ENST00000547517 FAM50BQ9Y247 325 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 SSX2IPQ9Y2D8 614 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 PDCD11Q14690 1871 aaKnown RBP12.88□□□□□ -0.35
RAB5C-204ENST00000547517 TRIP11Q15643 1979 aa12.88□□□□□ -0.35
RAB5C-204ENST00000547517 A0A1W2PQ27 194 aa12.87□□□□□ -0.35
RAB5C-204ENST00000547517 A0A1W2PQ64 194 aa12.87□□□□□ -0.35
RAB5C-204ENST00000547517 A0A1W2PQD8 194 aa12.87□□□□□ -0.35
RAB5C-204ENST00000547517 TTC26A0AVF1 554 aa12.87□□□□□ -0.35
RAB5C-204ENST00000547517 LACTBL1A8MY62 500 aa12.87□□□□□ -0.35
RAB5C-204ENST00000547517 TMEM189-UBE2V1I3L0A0 370 aa12.87□□□□□ -0.35
RAB5C-204ENST00000547517 I3L4J1 428 aa12.87□□□□□ -0.35
RAB5C-204ENST00000547517 TEX28O15482 410 aa12.87□□□□□ -0.35
RAB5C-204ENST00000547517 LILRB3O75022 631 aa12.87□□□□□ -0.35
RAB5C-204ENST00000547517 KLRC2P26717 231 aa12.87□□□□□ -0.35
RAB5C-204ENST00000547517 ELAVL2Q12926 359 aaKnown RBP12.87□□□□□ -0.35
RAB5C-204ENST00000547517 FAM171A1Q5VUB5 890 aa12.87□□□□□ -0.35
RAB5C-204ENST00000547517 KIAA0319Q5VV43 1072 aa12.87□□□□□ -0.35
RAB5C-204ENST00000547517 PRSS55Q6UWB4 352 aaPredicted RBP12.87□□□□□ -0.35
RAB5C-204ENST00000547517 TMEM184AQ6ZMB5 413 aa12.87□□□□□ -0.35
RAB5C-204ENST00000547517 GLYCTKQ8IVS8 523 aa12.87□□□□□ -0.35
RAB5C-204ENST00000547517 TMEM130Q8N3G9 435 aa12.87□□□□□ -0.35
RAB5C-204ENST00000547517 PAGE5Q96GU1 130 aa12.87□□□□□ -0.35
RAB5C-204ENST00000547517 CHST7Q9NS84 486 aa12.87□□□□□ -0.35
RAB5C-204ENST00000547517 CPSF3Q9UKF6 684 aaKnown RBP12.87□□□□□ -0.35
RAB5C-204ENST00000547517 USP15Q9Y4E8 981 aaPredicted RBP12.87□□□□□ -0.35
RAB5C-204ENST00000547517 STYXL1Q9Y6J8 313 aa12.87□□□□□ -0.35
RAB5C-204ENST00000547517 SPDYE4A6NLX3 237 aa12.86□□□□□ -0.35
RAB5C-204ENST00000547517 TULP1O00294 542 aaPredicted RBP12.86□□□□□ -0.35
RAB5C-204ENST00000547517 ADH1AP07327 375 aa12.86□□□□□ -0.35
RAB5C-204ENST00000547517 NFICP08651 508 aa12.86□□□□□ -0.35
RAB5C-204ENST00000547517 RPL17P18621 184 aaKnown RBP12.86□□□□□ -0.35
RAB5C-204ENST00000547517 ADSSP30520 456 aa12.86□□□□□ -0.35
RAB5C-204ENST00000547517 ANP32AP39687 249 aaKnown RBP12.86□□□□□ -0.35
RAB5C-204ENST00000547517 BRCC3P46736 316 aa12.86□□□□□ -0.35
RAB5C-204ENST00000547517 CLCN4P51793 760 aa12.86□□□□□ -0.35
RAB5C-204ENST00000547517 GUCY2FP51841 1108 aa12.86□□□□□ -0.35
RAB5C-204ENST00000547517 POSTNQ15063 836 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms