RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 KNOP1Q1ED39 458 aaKnown RBP18.73■□□□□ 0.59
RBFOX1-207ENST00000547338 ECHDC2Q86YB7 292 aa18.73■□□□□ 0.59
RBFOX1-207ENST00000547338 EXOC8Q8IYI6 725 aa18.73■□□□□ 0.59
RBFOX1-207ENST00000547338 RABGGTAQ92696 567 aa18.73■□□□□ 0.59
RBFOX1-207ENST00000547338 NHEJ1Q9H9Q4 299 aaPredicted RBP18.73■□□□□ 0.59
RBFOX1-207ENST00000547338 LMCD1Q9NZU5 365 aa18.73■□□□□ 0.59
RBFOX1-207ENST00000547338 DBR1Q9UK59 544 aaKnown RBP18.73■□□□□ 0.59
RBFOX1-207ENST00000547338 PCDHB7Q9Y5E2 793 aa18.73■□□□□ 0.59
RBFOX1-207ENST00000547338 SSU72P8A0A1W2PR75 194 aa18.72■□□□□ 0.59
RBFOX1-207ENST00000547338 TBCAO75347 108 aaKnown RBP18.72■□□□□ 0.59
RBFOX1-207ENST00000547338 DGAT1O75907 488 aa18.72■□□□□ 0.59
RBFOX1-207ENST00000547338 LCA5LO95447 670 aa18.72■□□□□ 0.59
RBFOX1-207ENST00000547338 SRGAP2CP0DJJ0 459 aa18.72■□□□□ 0.59
RBFOX1-207ENST00000547338 CTNNB1P35222 781 aa18.72■□□□□ 0.59
RBFOX1-207ENST00000547338 ADAM9Q13443 819 aa18.72■□□□□ 0.59
RBFOX1-207ENST00000547338 SPA17Q15506 151 aa18.72■□□□□ 0.59
RBFOX1-207ENST00000547338 TRIM59Q8IWR1 403 aa18.72■□□□□ 0.59
RBFOX1-207ENST00000547338 CCDC42Q96M95 316 aa18.72■□□□□ 0.59
RBFOX1-207ENST00000547338 CARD6Q9BX69 1037 aa18.72■□□□□ 0.59
RBFOX1-207ENST00000547338 ATP6V0A4Q9HBG4 840 aa18.72■□□□□ 0.59
RBFOX1-207ENST00000547338 GPRC5CQ9NQ84 441 aa18.72■□□□□ 0.59
RBFOX1-207ENST00000547338 AGPAT5Q9NUQ2 364 aa18.72■□□□□ 0.59
RBFOX1-207ENST00000547338 OGFRQ9NZT2 677 aa18.72■□□□□ 0.59
RBFOX1-207ENST00000547338 LRFN2Q9ULH4 789 aa18.72■□□□□ 0.59
RBFOX1-207ENST00000547338 ODF2LQ9ULJ1 636 aa18.72■□□□□ 0.59
RBFOX1-207ENST00000547338 A0A0U1RQF3 1178 aa18.71■□□□□ 0.59
RBFOX1-207ENST00000547338 GRM6O15303 877 aa18.71■□□□□ 0.59
RBFOX1-207ENST00000547338 SLC16A3O15427 465 aaKnown RBP18.71■□□□□ 0.59
RBFOX1-207ENST00000547338 USO1O60763 962 aaKnown RBP18.71■□□□□ 0.59
RBFOX1-207ENST00000547338 H2AFXP16104 143 aaPredicted RBP18.71■□□□□ 0.59
RBFOX1-207ENST00000547338 GLRA2P23416 452 aa18.71■□□□□ 0.59
RBFOX1-207ENST00000547338 HOXA11P31270 313 aaPredicted RBP18.71■□□□□ 0.59
RBFOX1-207ENST00000547338 GPM6BQ13491 265 aa18.71■□□□□ 0.59
RBFOX1-207ENST00000547338 CAPSQ13938 189 aa18.71■□□□□ 0.59
RBFOX1-207ENST00000547338 CAMK1Q14012 370 aa18.71■□□□□ 0.59
RBFOX1-207ENST00000547338 CLLU1OSQ5K130 101 aa18.71■□□□□ 0.59
RBFOX1-207ENST00000547338 RNF149Q8NC42 400 aa18.71■□□□□ 0.59
RBFOX1-207ENST00000547338 ACRBPQ8NEB7 543 aa18.71■□□□□ 0.59
RBFOX1-207ENST00000547338 TCP11Q8WWU5 503 aa18.71■□□□□ 0.59
RBFOX1-207ENST00000547338 GOLGA1Q92805 767 aa18.71■□□□□ 0.59
RBFOX1-207ENST00000547338 CASD1Q96PB1 797 aa18.71■□□□□ 0.59
RBFOX1-207ENST00000547338 TRAIPQ9BWF2 469 aa18.71■□□□□ 0.59
RBFOX1-207ENST00000547338 TYW1Q9NV66 732 aaKnown RBP18.71■□□□□ 0.59
RBFOX1-207ENST00000547338 CEP72Q9P209 647 aa18.71■□□□□ 0.59
RBFOX1-207ENST00000547338 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.71■□□□□ 0.59
RBFOX1-207ENST00000547338 TBKBP1A7MCY6 615 aa18.7■□□□□ 0.58
RBFOX1-207ENST00000547338 MEIS3P2A8K0S8 358 aa18.7■□□□□ 0.58
RBFOX1-207ENST00000547338 FANCGO15287 622 aa18.7■□□□□ 0.58
RBFOX1-207ENST00000547338 PTENP60484 403 aa18.7■□□□□ 0.58
RBFOX1-207ENST00000547338 MAPK8IP2Q13387 824 aaPredicted RBP18.7■□□□□ 0.58
RBFOX1-207ENST00000547338 ELF2Q15723 593 aa18.7■□□□□ 0.58
RBFOX1-207ENST00000547338 ERCC6LQ2NKX8 1250 aa18.7■□□□□ 0.58
RBFOX1-207ENST00000547338 RSRC2Q7L4I2 434 aaKnown RBP18.7■□□□□ 0.58
RBFOX1-207ENST00000547338 SRGAP1Q7Z6B7 1085 aa18.7■□□□□ 0.58
RBFOX1-207ENST00000547338 IFNLR1Q8IU57 520 aaPredicted RBP18.7■□□□□ 0.58
RBFOX1-207ENST00000547338 MRPL38Q96DV4 380 aaKnown RBP18.7■□□□□ 0.58
RBFOX1-207ENST00000547338 CWH43Q9H720 699 aa18.7■□□□□ 0.58
RBFOX1-207ENST00000547338 MMRN2Q9H8L6 949 aa18.7■□□□□ 0.58
RBFOX1-207ENST00000547338 LUC7LQ9NQ29 371 aaKnown RBP18.7■□□□□ 0.58
RBFOX1-207ENST00000547338 CHST12Q9NRB3 414 aa18.7■□□□□ 0.58
RBFOX1-207ENST00000547338 MYO6Q9UM54 1294 aa18.7■□□□□ 0.58
RBFOX1-207ENST00000547338 DAAM1Q9Y4D1 1078 aa18.7■□□□□ 0.58
RBFOX1-207ENST00000547338 PLXNA4Q9HCM2 1894 aa18.7■□□□□ 0.58
RBFOX1-207ENST00000547338 ANO9A1A5B4 782 aa18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 ASAP2O43150 1006 aa18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 RB1P06400 928 aa18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 ZSCAN20P17040 1043 aaPredicted RBP18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 DNAJB1P25685 340 aa18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 PHKA2P46019 1235 aa18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 AMHR2Q16671 573 aa18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 UBXN11Q5T124 520 aa18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 RINT1Q6NUQ1 792 aa18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 CATSPER4Q7RTX7 472 aa18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 KIAA1328Q86T90 577 aa18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 GOLGA5Q8TBA6 731 aa18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 BSNDQ8WZ55 320 aa18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 RPGRIP1Q96KN7 1286 aa18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 REEP2Q9BRK0 252 aa18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 POLR3FQ9H1D9 316 aaPredicted RBP18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 BHMT2Q9H2M3 363 aa18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 PIN4Q9Y237 131 aaKnown RBP18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 ITGB1P05556 798 aa18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 MAPTP10636 758 aaKnown RBP18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 VAV2P52735 878 aa18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 TFF2Q03403 129 aa18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 MBTD1Q05BQ5 628 aa18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 KIF5AQ12840 1032 aa18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 ALCAMQ13740 583 aa18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 MYBPC2Q14324 1141 aa18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 MXD4Q14582 209 aaPredicted RBP18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 C1orf186Q6ZWK4 172 aa18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 CACNA2D4Q7Z3S7 1137 aa18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 SLC35F6Q8N357 371 aa18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 TIPINQ9BVW5 301 aa18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 PLVAPQ9BX97 442 aa18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 INO80BQ9C086 356 aaPredicted RBP18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 PLCB1Q9NQ66 1216 aa18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 RWDD3Q9Y3V2 267 aa18.69■□□□□ 0.58
RBFOX1-207ENST00000547338 GUCY2CP25092 1073 aa18.68■□□□□ 0.58
RBFOX1-207ENST00000547338 ANXA13P27216 316 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms