RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 MAPK8IP1Q9UQF2 711 aa13.19□□□□□ -0.3
HDAC7-226ENST00000547259 USTQ9Y2C2 406 aa13.19□□□□□ -0.3
HDAC7-226ENST00000547259 IRAK3Q9Y616 596 aa13.19□□□□□ -0.3
HDAC7-226ENST00000547259 USP34Q70CQ2 3546 aa13.18□□□□□ -0.3
HDAC7-226ENST00000547259 HIDE1A8MVS5 230 aa13.18□□□□□ -0.3
HDAC7-226ENST00000547259 CSDE1O75534 798 aaKnown RBP13.18□□□□□ -0.3
HDAC7-226ENST00000547259 CCDC192P0DO97 292 aa13.18□□□□□ -0.3
HDAC7-226ENST00000547259 BMP6P22004 513 aa13.18□□□□□ -0.3
HDAC7-226ENST00000547259 FGFR4P22455 802 aa13.18□□□□□ -0.3
HDAC7-226ENST00000547259 PPP1R2P41236 205 aa13.18□□□□□ -0.3
HDAC7-226ENST00000547259 BCAR1P56945 870 aa13.18□□□□□ -0.3
HDAC7-226ENST00000547259 DPCR1Q3MIW9 517 aa13.18□□□□□ -0.3
HDAC7-226ENST00000547259 IER5LQ5T953 404 aa13.18□□□□□ -0.3
HDAC7-226ENST00000547259 GLB1LQ6UWU2 654 aa13.18□□□□□ -0.3
HDAC7-226ENST00000547259 PPP4R3CPQ6ZMV5 832 aa13.18□□□□□ -0.3
HDAC7-226ENST00000547259 TAS1R3Q7RTX0 852 aa13.18□□□□□ -0.3
HDAC7-226ENST00000547259 CATSPER4Q7RTX7 472 aa13.18□□□□□ -0.3
HDAC7-226ENST00000547259 ZNF598Q86UK7 904 aaKnown RBP13.18□□□□□ -0.3
HDAC7-226ENST00000547259 MAP4K3Q8IVH8 894 aa13.18□□□□□ -0.3
HDAC7-226ENST00000547259 SYCP3Q8IZU3 236 aa13.18□□□□□ -0.3
HDAC7-226ENST00000547259 GUF1Q8N442 669 aaKnown RBP13.18□□□□□ -0.3
HDAC7-226ENST00000547259 MLKLQ8NB16 471 aa13.18□□□□□ -0.3
HDAC7-226ENST00000547259 ZNF507Q8TCN5 953 aa13.18□□□□□ -0.3
HDAC7-226ENST00000547259 SCFD1Q8WVM8 642 aa13.18□□□□□ -0.3
HDAC7-226ENST00000547259 PRIMPOLQ96LW4 560 aa13.18□□□□□ -0.3
HDAC7-226ENST00000547259 STRA6Q9BX79 667 aa13.18□□□□□ -0.3
HDAC7-226ENST00000547259 MRPL4Q9BYD3 311 aaKnown RBP13.18□□□□□ -0.3
HDAC7-226ENST00000547259 TMEM206Q9H813 350 aa13.18□□□□□ -0.3
HDAC7-226ENST00000547259 MINDY3Q9H8M7 445 aa13.18□□□□□ -0.3
HDAC7-226ENST00000547259 RNF19AQ9NV58 838 aa13.18□□□□□ -0.3
HDAC7-226ENST00000547259 ANO10Q9NW15 660 aa13.18□□□□□ -0.3
HDAC7-226ENST00000547259 CTNND2Q9UQB3 1225 aa13.18□□□□□ -0.3
HDAC7-226ENST00000547259 HCFC2Q9Y5Z7 792 aa13.18□□□□□ -0.3
HDAC7-226ENST00000547259 ZMYM2Q9UBW7 1377 aa13.18□□□□□ -0.3
HDAC7-226ENST00000547259 CNTNAP2Q9UHC6 1331 aa13.17□□□□□ -0.3
HDAC7-226ENST00000547259 PSMA7O14818 248 aa13.17□□□□□ -0.3
HDAC7-226ENST00000547259 HNRNPDLO14979 420 aaKnown RBP13.17□□□□□ -0.3
HDAC7-226ENST00000547259 ZNF623O75123 536 aa13.17□□□□□ -0.3
HDAC7-226ENST00000547259 CA8P35219 290 aa13.17□□□□□ -0.3
HDAC7-226ENST00000547259 PRCPP42785 496 aa13.17□□□□□ -0.3
HDAC7-226ENST00000547259 LIG4P49917 911 aa13.17□□□□□ -0.3
HDAC7-226ENST00000547259 RBM10P98175 930 aaKnown RBP13.17□□□□□ -0.3
HDAC7-226ENST00000547259 RNASELQ05823 741 aaKnown RBP13.17□□□□□ -0.3
HDAC7-226ENST00000547259 TCF15Q12870 199 aa13.17□□□□□ -0.3
HDAC7-226ENST00000547259 PRPF4BQ13523 1007 aaKnown RBP13.17□□□□□ -0.3
HDAC7-226ENST00000547259 PCBP1Q15365 356 aaKnown RBP eCLIP13.17□□□□□ -0.3
HDAC7-226ENST00000547259 BMT2Q1RMZ1 405 aa13.17□□□□□ -0.3
HDAC7-226ENST00000547259 COBLL1Q53SF7 1204 aa13.17□□□□□ -0.3
HDAC7-226ENST00000547259 CLLU1OSQ5K130 101 aa13.17□□□□□ -0.3
HDAC7-226ENST00000547259 TWF2Q6IBS0 349 aaKnown RBP13.17□□□□□ -0.3
HDAC7-226ENST00000547259 KLHL10Q6JEL2 608 aa13.17□□□□□ -0.3
HDAC7-226ENST00000547259 ELMSAN1Q6PJG2 1045 aa13.17□□□□□ -0.3
HDAC7-226ENST00000547259 DDX53Q86TM3 631 aaKnown RBP13.17□□□□□ -0.3
HDAC7-226ENST00000547259 ZDHHC14Q8IZN3 488 aa13.17□□□□□ -0.3
HDAC7-226ENST00000547259 ADSSL1Q8N142 457 aa13.17□□□□□ -0.3
HDAC7-226ENST00000547259 VPS52Q8N1B4 723 aa13.17□□□□□ -0.3
HDAC7-226ENST00000547259 KREMEN2Q8NCW0 462 aa13.17□□□□□ -0.3
HDAC7-226ENST00000547259 HELQQ8TDG4 1101 aa13.17□□□□□ -0.3
HDAC7-226ENST00000547259 ATOH1Q92858 354 aaPredicted RBP13.17□□□□□ -0.3
HDAC7-226ENST00000547259 KCNN1Q92952 543 aa13.17□□□□□ -0.3
HDAC7-226ENST00000547259 FZD8Q9H461 694 aa13.17□□□□□ -0.3
HDAC7-226ENST00000547259 KANSL3Q9P2N6 904 aa13.17□□□□□ -0.3
HDAC7-226ENST00000547259 HCSTQ9UBK5 93 aa13.17□□□□□ -0.3
HDAC7-226ENST00000547259 ACKR2O00590 384 aa13.16□□□□□ -0.3
HDAC7-226ENST00000547259 B4GALT5O43286 388 aa13.16□□□□□ -0.3
HDAC7-226ENST00000547259 TSPAN1O60635 241 aa13.16□□□□□ -0.3
HDAC7-226ENST00000547259 CLASP2O75122 1294 aaKnown RBP13.16□□□□□ -0.3
HDAC7-226ENST00000547259 EDN1P05305 212 aa13.16□□□□□ -0.3
HDAC7-226ENST00000547259 CTSAP10619 480 aa13.16□□□□□ -0.3
HDAC7-226ENST00000547259 CD44P16070 742 aaKnown RBP13.16□□□□□ -0.3
HDAC7-226ENST00000547259 MATR3P43243 847 aaKnown RBP eCLIP13.16□□□□□ -0.3
HDAC7-226ENST00000547259 NCBP1Q09161 790 aaKnown RBP13.16□□□□□ -0.3
HDAC7-226ENST00000547259 KCNA1Q09470 495 aa13.16□□□□□ -0.3
HDAC7-226ENST00000547259 AMHR2Q16671 573 aa13.16□□□□□ -0.3
HDAC7-226ENST00000547259 FAM187BQ17R55 369 aa13.16□□□□□ -0.3
HDAC7-226ENST00000547259 KNOP1Q1ED39 458 aaKnown RBP13.16□□□□□ -0.3
HDAC7-226ENST00000547259 KIAA1841Q6NSI8 718 aa13.16□□□□□ -0.3
HDAC7-226ENST00000547259 TDRD5Q8NAT2 981 aaKnown RBP13.16□□□□□ -0.3
HDAC7-226ENST00000547259 URGCPQ8TCY9 931 aa13.16□□□□□ -0.3
HDAC7-226ENST00000547259 ACSF2Q96CM8 615 aaPredicted RBP13.16□□□□□ -0.3
HDAC7-226ENST00000547259 TARS2Q9BW92 718 aaKnown RBP13.16□□□□□ -0.3
HDAC7-226ENST00000547259 EMILIN2Q9BXX0 1053 aa13.16□□□□□ -0.3
HDAC7-226ENST00000547259 AGPAT5Q9NUQ2 364 aa13.16□□□□□ -0.3
HDAC7-226ENST00000547259 DPP7Q9UHL4 492 aa13.16□□□□□ -0.3
HDAC7-226ENST00000547259 PIN4Q9Y237 131 aaKnown RBP13.16□□□□□ -0.3
HDAC7-226ENST00000547259 SSX2IPQ9Y2D8 614 aa13.16□□□□□ -0.3
HDAC7-226ENST00000547259 CFAP54Q96N23 3096 aa13.16□□□□□ -0.3
HDAC7-226ENST00000547259 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.15□□□□□ -0.3
HDAC7-226ENST00000547259 PPP1R3GB7ZBB8 358 aa13.15□□□□□ -0.3
HDAC7-226ENST00000547259 GALR2O43603 387 aaPredicted RBP13.15□□□□□ -0.3
HDAC7-226ENST00000547259 GFRA3O60609 400 aa13.15□□□□□ -0.3
HDAC7-226ENST00000547259 ZC3H11AO75152 810 aaKnown RBP eCLIP13.15□□□□□ -0.3
HDAC7-226ENST00000547259 HOXD13P35453 343 aa13.15□□□□□ -0.3
HDAC7-226ENST00000547259 PAK1Q13153 545 aa13.15□□□□□ -0.3
HDAC7-226ENST00000547259 ANO6Q4KMQ2 910 aa13.15□□□□□ -0.3
HDAC7-226ENST00000547259 NOMO2Q5JPE7 1267 aa13.15□□□□□ -0.3
HDAC7-226ENST00000547259 ATF7IP2Q5U623 682 aa13.15□□□□□ -0.3
HDAC7-226ENST00000547259 LRSAM1Q6UWE0 723 aa13.15□□□□□ -0.3
HDAC7-226ENST00000547259 ZPBP2Q6X784 338 aa13.15□□□□□ -0.3
HDAC7-226ENST00000547259 C11orf57Q6ZUT1 292 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms