RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 LGR5O75473 907 aa12.85□□□□□ -0.35
CCDC38-202ENST00000546386 H2AFXP16104 143 aaPredicted RBP12.85□□□□□ -0.35
CCDC38-202ENST00000546386 ARF4P18085 180 aaPredicted RBP12.85□□□□□ -0.35
CCDC38-202ENST00000546386 AKAP5P24588 427 aa12.85□□□□□ -0.35
CCDC38-202ENST00000546386 PRKCIP41743 596 aa12.85□□□□□ -0.35
CCDC38-202ENST00000546386 MFAP3P55082 362 aa12.85□□□□□ -0.35
CCDC38-202ENST00000546386 FAM193AP78312 1265 aa12.85□□□□□ -0.35
CCDC38-202ENST00000546386 MBTD1Q05BQ5 628 aa12.85□□□□□ -0.35
CCDC38-202ENST00000546386 BMS1Q14692 1282 aaKnown RBP12.85□□□□□ -0.35
CCDC38-202ENST00000546386 PLPPR4Q7Z2D5 763 aa12.85□□□□□ -0.35
CCDC38-202ENST00000546386 ZBTB8OSQ8IWT0 167 aa12.85□□□□□ -0.35
CCDC38-202ENST00000546386 C12orf56Q8IXR9 622 aa12.85□□□□□ -0.35
CCDC38-202ENST00000546386 SPATA4Q8NEY3 305 aa12.85□□□□□ -0.35
CCDC38-202ENST00000546386 LMBR1Q8WVP7 490 aa12.85□□□□□ -0.35
CCDC38-202ENST00000546386 KRT35Q92764 455 aa12.85□□□□□ -0.35
CCDC38-202ENST00000546386 CGNQ9P2M7 1197 aaKnown RBP12.85□□□□□ -0.35
CCDC38-202ENST00000546386 NOCTQ9UK39 431 aaKnown RBP12.85□□□□□ -0.35
CCDC38-202ENST00000546386 DIS3Q9Y2L1 958 aaKnown RBP12.85□□□□□ -0.35
CCDC38-202ENST00000546386 POLR3GO15318 223 aaPredicted RBP12.85□□□□□ -0.35
CCDC38-202ENST00000546386 PJA2O43164 708 aa12.85□□□□□ -0.35
CCDC38-202ENST00000546386 TOM1L1O75674 476 aa12.85□□□□□ -0.35
CCDC38-202ENST00000546386 TUBB4AP04350 444 aa12.85□□□□□ -0.35
CCDC38-202ENST00000546386 C6orf222P0C671 652 aaPredicted RBP12.85□□□□□ -0.35
CCDC38-202ENST00000546386 ELNP15502 786 aa12.85□□□□□ -0.35
CCDC38-202ENST00000546386 GARTP22102 1010 aa12.85□□□□□ -0.35
CCDC38-202ENST00000546386 GCLCP48506 637 aaPredicted RBP12.85□□□□□ -0.35
CCDC38-202ENST00000546386 NOP14P78316 857 aaKnown RBP12.85□□□□□ -0.35
CCDC38-202ENST00000546386 ZACNQ401N2 412 aa12.85□□□□□ -0.35
CCDC38-202ENST00000546386 WDR44Q5JSH3 913 aa12.85□□□□□ -0.35
CCDC38-202ENST00000546386 CHADLQ6NUI6 762 aa12.85□□□□□ -0.35
CCDC38-202ENST00000546386 RGMBQ6NW40 437 aa12.85□□□□□ -0.35
CCDC38-202ENST00000546386 TLK2Q86UE8 772 aa12.85□□□□□ -0.35
CCDC38-202ENST00000546386 SESTD1Q86VW0 696 aa12.85□□□□□ -0.35
CCDC38-202ENST00000546386 FAM71AQ8IYT1 594 aa12.85□□□□□ -0.35
CCDC38-202ENST00000546386 TMEM40Q8WWA1 233 aa12.85□□□□□ -0.35
CCDC38-202ENST00000546386 RNF25Q96BH1 459 aaPredicted RBP12.85□□□□□ -0.35
CCDC38-202ENST00000546386 IQCDQ96DY2 449 aa12.85□□□□□ -0.35
CCDC38-202ENST00000546386 KRT12Q99456 494 aa12.85□□□□□ -0.35
CCDC38-202ENST00000546386 LPIN3Q9BQK8 851 aa12.85□□□□□ -0.35
CCDC38-202ENST00000546386 TRIM31Q9BZY9 425 aa12.85□□□□□ -0.35
CCDC38-202ENST00000546386 ADGRA2Q96PE1 1338 aa12.85□□□□□ -0.35
CCDC38-202ENST00000546386 HCRTO43612 131 aa12.84□□□□□ -0.35
CCDC38-202ENST00000546386 STRNO43815 780 aa12.84□□□□□ -0.35
CCDC38-202ENST00000546386 CTSHP09668 335 aa12.84□□□□□ -0.35
CCDC38-202ENST00000546386 IGFBP6P24592 240 aaPredicted RBP12.84□□□□□ -0.35
CCDC38-202ENST00000546386 WDR72Q3MJ13 1102 aa12.84□□□□□ -0.35
CCDC38-202ENST00000546386 MTHFD1LQ6UB35 978 aa12.84□□□□□ -0.35
CCDC38-202ENST00000546386 TMCO3Q6UWJ1 677 aa12.84□□□□□ -0.35
CCDC38-202ENST00000546386 PPTC7Q8NI37 304 aa12.84□□□□□ -0.35
CCDC38-202ENST00000546386 IFT81Q8WYA0 676 aa12.84□□□□□ -0.35
CCDC38-202ENST00000546386 ACSF2Q96CM8 615 aaPredicted RBP12.84□□□□□ -0.35
CCDC38-202ENST00000546386 OSBPL7Q9BZF2 842 aa12.84□□□□□ -0.35
CCDC38-202ENST00000546386 CDT1Q9H211 546 aa12.84□□□□□ -0.35
CCDC38-202ENST00000546386 ABHD16BQ9H3Z7 469 aa12.84□□□□□ -0.35
CCDC38-202ENST00000546386 TJP2Q9UDY2 1190 aa12.84□□□□□ -0.35
CCDC38-202ENST00000546386 HMGXB4Q9UGU5 601 aa12.84□□□□□ -0.35
CCDC38-202ENST00000546386 A0A0G2JMZ2 1700 aa12.84□□□□□ -0.35
CCDC38-202ENST00000546386 SCN4AP35499 1836 aa12.84□□□□□ -0.35
CCDC38-202ENST00000546386 FAM189A1O60320 539 aa12.84□□□□□ -0.35
CCDC38-202ENST00000546386 N4BP1O75113 896 aaKnown RBP12.84□□□□□ -0.35
CCDC38-202ENST00000546386 BRD2P25440 801 aaKnown RBP12.84□□□□□ -0.35
CCDC38-202ENST00000546386 MXD4Q14582 209 aaPredicted RBP12.84□□□□□ -0.35
CCDC38-202ENST00000546386 RPS6KA1Q15418 735 aa12.84□□□□□ -0.35
CCDC38-202ENST00000546386 WHAMMP3Q1A5X7 153 aa12.84□□□□□ -0.35
CCDC38-202ENST00000546386 DUSP28Q4G0W2 176 aa12.84□□□□□ -0.35
CCDC38-202ENST00000546386 CXCL17Q6UXB2 119 aa12.84□□□□□ -0.35
CCDC38-202ENST00000546386 DDX42Q86XP3 938 aaKnown RBP eCLIP12.84□□□□□ -0.35
CCDC38-202ENST00000546386 IFNL1Q8IU54 200 aa12.84□□□□□ -0.35
CCDC38-202ENST00000546386 C11orf70Q9BRQ4 267 aa12.84□□□□□ -0.35
CCDC38-202ENST00000546386 SYT11Q9BT88 431 aa12.84□□□□□ -0.35
CCDC38-202ENST00000546386 EIF2AQ9BY44 585 aaKnown RBP12.84□□□□□ -0.35
CCDC38-202ENST00000546386 CCDC113Q9H0I3 377 aa12.84□□□□□ -0.35
CCDC38-202ENST00000546386 KLHL11Q9NVR0 708 aa12.84□□□□□ -0.35
CCDC38-202ENST00000546386 BZW2Q9Y6E2 419 aaKnown RBP12.84□□□□□ -0.35
CCDC38-202ENST00000546386 LACTBL1A8MY62 500 aa12.83□□□□□ -0.35
CCDC38-202ENST00000546386 STAG3L1P0CL83 205 aa12.83□□□□□ -0.35
CCDC38-202ENST00000546386 ZBTB48P10074 688 aaPredicted RBP12.83□□□□□ -0.35
CCDC38-202ENST00000546386 TNNT3P45378 269 aaPredicted RBP12.83□□□□□ -0.35
CCDC38-202ENST00000546386 PDE6CP51160 858 aa12.83□□□□□ -0.35
CCDC38-202ENST00000546386 GPC3P51654 580 aa12.83□□□□□ -0.35
CCDC38-202ENST00000546386 PSMD6Q15008 389 aa12.83□□□□□ -0.35
CCDC38-202ENST00000546386 FAM47CQ5HY64 1035 aa12.83□□□□□ -0.35
CCDC38-202ENST00000546386 MEI1Q5TIA1 1274 aa12.83□□□□□ -0.35
CCDC38-202ENST00000546386 JADE1Q6IE81 842 aa12.83□□□□□ -0.35
CCDC38-202ENST00000546386 CC2D1AQ6P1N0 951 aaPredicted RBP12.83□□□□□ -0.35
CCDC38-202ENST00000546386 GPR161Q8N6U8 529 aaKnown RBP12.83□□□□□ -0.35
CCDC38-202ENST00000546386 SHCBP1Q8NEM2 672 aa12.83□□□□□ -0.35
CCDC38-202ENST00000546386 SHC3Q92529 594 aa12.83□□□□□ -0.35
CCDC38-202ENST00000546386 ZNF653Q96CK0 615 aa12.83□□□□□ -0.35
CCDC38-202ENST00000546386 CELF4Q9BZC1 486 aaKnown RBP12.83□□□□□ -0.35
CCDC38-202ENST00000546386 DDX47Q9H0S4 455 aaKnown RBP12.83□□□□□ -0.35
CCDC38-202ENST00000546386 MORF4L1Q9UBU8 362 aa12.83□□□□□ -0.35
CCDC38-202ENST00000546386 THAP12O43422 761 aa12.83□□□□□ -0.36
CCDC38-202ENST00000546386 PPFIA4O75335 1185 aa12.83□□□□□ -0.36
CCDC38-202ENST00000546386 ITGB3P05106 788 aa12.83□□□□□ -0.36
CCDC38-202ENST00000546386 TMEM191BP0C7N4 346 aa12.83□□□□□ -0.36
CCDC38-202ENST00000546386 SSR1P43307 286 aaKnown RBP12.83□□□□□ -0.36
CCDC38-202ENST00000546386 RTP1P59025 263 aa12.83□□□□□ -0.36
CCDC38-202ENST00000546386 PTENP60484 403 aa12.83□□□□□ -0.36
CCDC38-202ENST00000546386 KIF22Q14807 665 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms