RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 EN1Q05925 392 aaPredicted RBP16.32■□□□□ 0.2
CNN3-207ENST00000545882 DGKZQ13574 1117 aa16.32■□□□□ 0.2
CNN3-207ENST00000545882 PTK6Q13882 451 aa16.32■□□□□ 0.2
CNN3-207ENST00000545882 MCF2L2Q86YR7 1114 aa16.32■□□□□ 0.2
CNN3-207ENST00000545882 MCOLN2Q8IZK6 566 aa16.32■□□□□ 0.2
CNN3-207ENST00000545882 LARGE2Q8N3Y3 721 aa16.32■□□□□ 0.2
CNN3-207ENST00000545882 OGFOD1Q8N543 542 aa16.32■□□□□ 0.2
CNN3-207ENST00000545882 DCLK3Q9C098 648 aa16.32■□□□□ 0.2
CNN3-207ENST00000545882 ADGRA3Q8IWK6 1321 aa16.32■□□□□ 0.2
CNN3-207ENST00000545882 MGRN1O60291 552 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 VIMP08670 466 aaKnown RBP16.31■□□□□ 0.2
CNN3-207ENST00000545882 ITIH2P19823 946 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 SNCBQ16143 134 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 TAOK1Q7L7X3 1001 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 CCDC91Q7Z6B0 441 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 PHLDB2Q86SQ0 1253 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 ANKS4BQ8N8V4 417 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 SLC17A8Q8NDX2 589 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 ZNF516Q92618 1163 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 KIFAP3Q92845 792 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 ARHGEF2Q92974 986 aaKnown RBP16.31■□□□□ 0.2
CNN3-207ENST00000545882 DDX27Q96GQ7 796 aaKnown RBP16.31■□□□□ 0.2
CNN3-207ENST00000545882 ZBED3Q96IU2 234 aaPredicted RBP16.31■□□□□ 0.2
CNN3-207ENST00000545882 SERPINB12Q96P63 405 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 ZNF341Q9BYN7 854 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 PDGFDQ9GZP0 370 aaPredicted RBP16.31■□□□□ 0.2
CNN3-207ENST00000545882 CCDC113Q9H0I3 377 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 ZNF277Q9NRM2 450 aaPredicted RBP16.31■□□□□ 0.2
CNN3-207ENST00000545882 HOMER2Q9NSB8 354 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 CTNNAL1Q9UBT7 734 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 R3HDM2Q9Y2K5 976 aaKnown RBP16.31■□□□□ 0.2
CNN3-207ENST00000545882 NEU2Q9Y3R4 380 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 STBD1O95210 358 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 GSTA1P08263 222 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 MYCLP12524 364 aaPredicted RBP16.31■□□□□ 0.2
CNN3-207ENST00000545882 KRT5P13647 590 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 SCP2P22307 547 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 RRM1P23921 792 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 GTF2H1P32780 548 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 ITGA8P53708 1063 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 RPS6P62753 249 aaKnown RBP16.31■□□□□ 0.2
CNN3-207ENST00000545882 ELF3P78545 371 aaPredicted RBP16.31■□□□□ 0.2
CNN3-207ENST00000545882 LRRC14Q15048 493 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 TRIP13Q15645 432 aaPredicted RBP16.31■□□□□ 0.2
CNN3-207ENST00000545882 PREPLQ4J6C6 727 aaPredicted RBP16.31■□□□□ 0.2
CNN3-207ENST00000545882 DAB2IPQ5VWQ8 1189 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 C15orf39Q6ZRI6 1047 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 OTUD6AQ7L8S5 288 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 SNF8Q96H20 258 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 PWWP2AQ96N64 755 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 NCAPGQ9BPX3 1015 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 NTPCRQ9BSD7 190 aaKnown RBP16.31■□□□□ 0.2
CNN3-207ENST00000545882 VPS33BQ9H267 617 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 KMT5AQ9NQR1 393 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 AVENQ9NQS1 362 aaPredicted RBP16.31■□□□□ 0.2
CNN3-207ENST00000545882 ASIC3Q9UHC3 531 aa16.31■□□□□ 0.2
CNN3-207ENST00000545882 WDR64B1ANS9 1081 aa16.3■□□□□ 0.2
CNN3-207ENST00000545882 O00370 1275 aa16.3■□□□□ 0.2
CNN3-207ENST00000545882 SNX3O60493 162 aa16.3■□□□□ 0.2
CNN3-207ENST00000545882 TTC4O95801 387 aa16.3■□□□□ 0.2
CNN3-207ENST00000545882 JAK3P52333 1124 aa16.3■□□□□ 0.2
CNN3-207ENST00000545882 GCNT1Q02742 428 aa16.3■□□□□ 0.2
CNN3-207ENST00000545882 MPP2Q14168 576 aa16.3■□□□□ 0.2
CNN3-207ENST00000545882 KYNUQ16719 465 aa16.3■□□□□ 0.2
CNN3-207ENST00000545882 C2CD6Q53TS8 623 aa16.3■□□□□ 0.2
CNN3-207ENST00000545882 WLSQ5T9L3 541 aa16.3■□□□□ 0.2
CNN3-207ENST00000545882 TRPM8Q7Z2W7 1104 aa16.3■□□□□ 0.2
CNN3-207ENST00000545882 AGBL3Q8NEM8 1001 aa16.3■□□□□ 0.2
CNN3-207ENST00000545882 SPIRE2Q8WWL2 714 aa16.3■□□□□ 0.2
CNN3-207ENST00000545882 CPA5Q8WXQ8 436 aa16.3■□□□□ 0.2
CNN3-207ENST00000545882 SLC38A10Q9HBR0 1119 aa16.3■□□□□ 0.2
CNN3-207ENST00000545882 ABCF3Q9NUQ8 709 aa16.3■□□□□ 0.2
CNN3-207ENST00000545882 DNAJC17Q9NVM6 304 aaKnown RBP16.3■□□□□ 0.2
CNN3-207ENST00000545882 SAMD15Q9P1V8 674 aa16.3■□□□□ 0.2
CNN3-207ENST00000545882 COL11A1P12107 1806 aaPredicted RBP16.3■□□□□ 0.2
CNN3-207ENST00000545882 UMODL1Q5DID0 1318 aa16.3■□□□□ 0.2
CNN3-207ENST00000545882 TMEM120BA0PK00 339 aa16.29■□□□□ 0.2
CNN3-207ENST00000545882 ASNSP08243 561 aa16.29■□□□□ 0.2
CNN3-207ENST00000545882 CETPP11597 493 aa16.29■□□□□ 0.2
CNN3-207ENST00000545882 DMP1Q13316 513 aaPredicted RBP16.29■□□□□ 0.2
CNN3-207ENST00000545882 TAS1R3Q7RTX0 852 aa16.29■□□□□ 0.2
CNN3-207ENST00000545882 POMGNT1Q8WZA1 660 aa16.29■□□□□ 0.2
CNN3-207ENST00000545882 PDCD2LQ9BRP1 358 aa16.29■□□□□ 0.2
CNN3-207ENST00000545882 NINJ2Q9NZG7 142 aa16.29■□□□□ 0.2
CNN3-207ENST00000545882 AGAP1Q9UPQ3 857 aa16.29■□□□□ 0.2
CNN3-207ENST00000545882 WDR46O15213 610 aaKnown RBP16.29■□□□□ 0.2
CNN3-207ENST00000545882 ZNF862O60290 1169 aa16.29■□□□□ 0.2
CNN3-207ENST00000545882 SORBS3O60504 671 aa16.29■□□□□ 0.2
CNN3-207ENST00000545882 CYP1A1P04798 512 aaPredicted RBP16.29■□□□□ 0.2
CNN3-207ENST00000545882 SFNP31947 248 aa16.29■□□□□ 0.2
CNN3-207ENST00000545882 WNT7BP56706 349 aa16.29■□□□□ 0.2
CNN3-207ENST00000545882 KLF1Q13351 362 aaPredicted RBP16.29■□□□□ 0.2
CNN3-207ENST00000545882 SYDE1Q6ZW31 735 aaPredicted RBP16.29■□□□□ 0.2
CNN3-207ENST00000545882 ANKS1BQ7Z6G8 1248 aa16.29■□□□□ 0.2
CNN3-207ENST00000545882 CYP4X1Q8N118 509 aa16.29■□□□□ 0.2
CNN3-207ENST00000545882 GPD1LQ8N335 351 aa16.29■□□□□ 0.2
CNN3-207ENST00000545882 SAMD3Q8N6K7 520 aa16.29■□□□□ 0.2
CNN3-207ENST00000545882 MAGEC3Q8TD91 643 aa16.29■□□□□ 0.2
CNN3-207ENST00000545882 MGARPQ8TDB4 240 aa16.29■□□□□ 0.2
CNN3-207ENST00000545882 PLVAPQ9BX97 442 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms