RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 HOXD11P31277 338 aaPredicted RBP21.75■■□□□ 1.07
CHD4-213ENST00000545584 CACNB1Q02641 598 aaPredicted RBP21.75■■□□□ 1.07
CHD4-213ENST00000545584 TDGQ13569 410 aa21.75■■□□□ 1.07
CHD4-213ENST00000545584 DHX8Q14562 1220 aaKnown RBP21.75■■□□□ 1.07
CHD4-213ENST00000545584 NOLC1Q14978 699 aaKnown RBP eCLIP21.75■■□□□ 1.07
CHD4-213ENST00000545584 GPBP1Q86WP2 473 aa21.75■■□□□ 1.07
CHD4-213ENST00000545584 BICD1Q96G01 975 aa21.75■■□□□ 1.07
CHD4-213ENST00000545584 ZBTB45Q96K62 511 aaPredicted RBP21.75■■□□□ 1.07
CHD4-213ENST00000545584 GOLGA2P5Q9HBQ8 144 aa21.75■■□□□ 1.07
CHD4-213ENST00000545584 TRIP11Q15643 1979 aa21.75■■□□□ 1.07
CHD4-213ENST00000545584 NPHP3-ACAD11A0A0J9YXS1 232 aa21.74■■□□□ 1.07
CHD4-213ENST00000545584 ABLIM1O14639 778 aa21.74■■□□□ 1.07
CHD4-213ENST00000545584 CLDN3O15551 220 aa21.74■■□□□ 1.07
CHD4-213ENST00000545584 FAM13AO94988 1023 aa21.74■■□□□ 1.07
CHD4-213ENST00000545584 KRT18P05783 430 aaKnown RBP21.74■■□□□ 1.07
CHD4-213ENST00000545584 HNRNPA1P09651 372 aaKnown RBP eCLIP21.74■■□□□ 1.07
CHD4-213ENST00000545584 KCNE1P15382 129 aa21.74■■□□□ 1.07
CHD4-213ENST00000545584 ARSHQ5FYA8 562 aa21.74■■□□□ 1.07
CHD4-213ENST00000545584 PPM1LQ5SGD2 360 aa21.74■■□□□ 1.07
CHD4-213ENST00000545584 ANKS3Q6ZW76 656 aa21.74■■□□□ 1.07
CHD4-213ENST00000545584 KCNK12Q9HB15 430 aa21.74■■□□□ 1.07
CHD4-213ENST00000545584 CNTN3Q9P232 1028 aa21.74■■□□□ 1.07
CHD4-213ENST00000545584 ZDBF2Q9HCK1 2354 aa21.73■■□□□ 1.07
CHD4-213ENST00000545584 PODXLO00592 558 aa21.73■■□□□ 1.07
CHD4-213ENST00000545584 SCP2P22307 547 aa21.73■■□□□ 1.07
CHD4-213ENST00000545584 AVPR2P30518 371 aa21.73■■□□□ 1.07
CHD4-213ENST00000545584 RPL9P32969 192 aaKnown RBP21.73■■□□□ 1.07
CHD4-213ENST00000545584 NCKAP1LP55160 1127 aa21.73■■□□□ 1.07
CHD4-213ENST00000545584 NHLH1Q02575 133 aa21.73■■□□□ 1.07
CHD4-213ENST00000545584 SOX4Q06945 474 aaPredicted RBP21.73■■□□□ 1.07
CHD4-213ENST00000545584 RAB33AQ14088 237 aa21.73■■□□□ 1.07
CHD4-213ENST00000545584 HAUS6Q7Z4H7 955 aa21.73■■□□□ 1.07
CHD4-213ENST00000545584 MYCT1Q8N699 235 aa21.73■■□□□ 1.07
CHD4-213ENST00000545584 REEP2Q9BRK0 252 aa21.73■■□□□ 1.07
CHD4-213ENST00000545584 MFSD1Q9H3U5 465 aa21.73■■□□□ 1.07
CHD4-213ENST00000545584 SMOC2Q9H3U7 446 aa21.73■■□□□ 1.07
CHD4-213ENST00000545584 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.73■■□□□ 1.07
CHD4-213ENST00000545584 MTRRQ9UBK8 725 aa21.73■■□□□ 1.07
CHD4-213ENST00000545584 NUB1Q9Y5A7 615 aa21.73■■□□□ 1.07
CHD4-213ENST00000545584 CITO14578 2027 aa21.72■■□□□ 1.07
CHD4-213ENST00000545584 PDGFBP01127 241 aaPredicted RBP21.72■■□□□ 1.07
CHD4-213ENST00000545584 C8AP07357 584 aa21.72■■□□□ 1.07
CHD4-213ENST00000545584 PLCG1P19174 1290 aa21.72■■□□□ 1.07
CHD4-213ENST00000545584 TKTP29401 623 aaKnown RBP21.72■■□□□ 1.07
CHD4-213ENST00000545584 OR1D2P34982 312 aa21.72■■□□□ 1.07
CHD4-213ENST00000545584 BRCC3P46736 316 aa21.72■■□□□ 1.07
CHD4-213ENST00000545584 PTPN5P54829 565 aa21.72■■□□□ 1.07
CHD4-213ENST00000545584 VCPP55072 806 aaKnown RBP21.72■■□□□ 1.07
CHD4-213ENST00000545584 KARSQ15046 597 aaKnown RBP21.72■■□□□ 1.07
CHD4-213ENST00000545584 IER5LQ5T953 404 aa21.72■■□□□ 1.07
CHD4-213ENST00000545584 GET4Q7L5D6 327 aaPredicted RBP21.72■■□□□ 1.07
CHD4-213ENST00000545584 RAD54LQ92698 747 aa21.72■■□□□ 1.07
CHD4-213ENST00000545584 ZMAT2Q96NC0 199 aaKnown RBP21.72■■□□□ 1.07
CHD4-213ENST00000545584 ZHX3Q9H4I2 956 aa21.72■■□□□ 1.07
CHD4-213ENST00000545584 PARVGQ9HBI0 331 aa21.72■■□□□ 1.07
CHD4-213ENST00000545584 BLOC1S4Q9NUP1 217 aa21.72■■□□□ 1.07
CHD4-213ENST00000545584 EPS15L1Q9UBC2 864 aa21.72■■□□□ 1.07
CHD4-213ENST00000545584 BACE2Q9Y5Z0 518 aa21.72■■□□□ 1.07
CHD4-213ENST00000545584 I3L4J1 428 aa21.71■■□□□ 1.07
CHD4-213ENST00000545584 ADAM12O43184 909 aa21.71■■□□□ 1.07
CHD4-213ENST00000545584 N4BP1O75113 896 aaKnown RBP21.71■■□□□ 1.07
CHD4-213ENST00000545584 XYLBO75191 536 aa21.71■■□□□ 1.07
CHD4-213ENST00000545584 TBCAO75347 108 aaKnown RBP21.71■■□□□ 1.07
CHD4-213ENST00000545584 HOXA9P31269 272 aa21.71■■□□□ 1.07
CHD4-213ENST00000545584 LIG4P49917 911 aa21.71■■□□□ 1.07
CHD4-213ENST00000545584 GRIN1Q05586 938 aa21.71■■□□□ 1.07
CHD4-213ENST00000545584 MCL1Q07820 350 aa21.71■■□□□ 1.07
CHD4-213ENST00000545584 MCM6Q14566 821 aa21.71■■□□□ 1.07
CHD4-213ENST00000545584 UVSSAQ2YD98 709 aa21.71■■□□□ 1.07
CHD4-213ENST00000545584 CD300LGQ6UXG3 332 aa21.71■■□□□ 1.07
CHD4-213ENST00000545584 C3orf58Q8NDZ4 430 aa21.71■■□□□ 1.07
CHD4-213ENST00000545584 NXPE3Q969Y0 559 aa21.71■■□□□ 1.07
CHD4-213ENST00000545584 MYADMQ96S97 322 aa21.71■■□□□ 1.07
CHD4-213ENST00000545584 CCSER1Q9C0I3 900 aa21.71■■□□□ 1.07
CHD4-213ENST00000545584 DUSP12Q9UNI6 340 aa21.71■■□□□ 1.07
CHD4-213ENST00000545584 CDY1Q9Y6F8 540 aa21.71■■□□□ 1.07
CHD4-213ENST00000545584 VWA8A3KMH1 1905 aa21.7■■□□□ 1.07
CHD4-213ENST00000545584 K7ENM7 598 aa21.7■■□□□ 1.06
CHD4-213ENST00000545584 HNRNPDLO14979 420 aaKnown RBP21.7■■□□□ 1.06
CHD4-213ENST00000545584 CLTAP09496 248 aa21.7■■□□□ 1.06
CHD4-213ENST00000545584 FSHRP23945 695 aa21.7■■□□□ 1.06
CHD4-213ENST00000545584 IGFBP6P24592 240 aaPredicted RBP21.7■■□□□ 1.06
CHD4-213ENST00000545584 ABCD1P33897 745 aa21.7■■□□□ 1.06
CHD4-213ENST00000545584 KYAT1Q16773 422 aa21.7■■□□□ 1.06
CHD4-213ENST00000545584 SLC10A6Q3KNW5 377 aa21.7■■□□□ 1.06
CHD4-213ENST00000545584 SEZ6Q53EL9 994 aa21.7■■□□□ 1.06
CHD4-213ENST00000545584 AXDND1Q5T1B0 1012 aaPredicted RBP21.7■■□□□ 1.06
CHD4-213ENST00000545584 RTL10Q7L3V2 364 aa21.7■■□□□ 1.06
CHD4-213ENST00000545584 PRSS33Q8NF86 280 aa21.7■■□□□ 1.06
CHD4-213ENST00000545584 LARP4BQ92615 738 aaKnown RBP21.7■■□□□ 1.06
CHD4-213ENST00000545584 KCNN1Q92952 543 aa21.7■■□□□ 1.06
CHD4-213ENST00000545584 PLEKHA5Q9HAU0 1116 aa21.7■■□□□ 1.06
CHD4-213ENST00000545584 CCDC39Q9UFE4 941 aa21.7■■□□□ 1.06
CHD4-213ENST00000545584 FBXL21Q9UKT6 434 aa21.7■■□□□ 1.06
CHD4-213ENST00000545584 POLIQ9UNA4 740 aa21.7■■□□□ 1.06
CHD4-213ENST00000545584 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.7■■□□□ 1.06
CHD4-213ENST00000545584 SYN3O14994 580 aa21.69■■□□□ 1.06
CHD4-213ENST00000545584 TRAK2O60296 914 aa21.69■■□□□ 1.06
CHD4-213ENST00000545584 SYT1P21579 422 aa21.69■■□□□ 1.06
CHD4-213ENST00000545584 ZNF131P52739 623 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms