RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 HARSP12081 509 aaKnown RBP7.58□□□□□ -1.2
HMGCS2-204ENST00000544913 ACTN1P12814 892 aa7.58□□□□□ -1.2
HMGCS2-204ENST00000544913 ATF7P17544 494 aaPredicted RBP7.58□□□□□ -1.2
HMGCS2-204ENST00000544913 TRIM21P19474 475 aaKnown RBP7.58□□□□□ -1.2
HMGCS2-204ENST00000544913 SLC9A1P19634 815 aa7.58□□□□□ -1.2
HMGCS2-204ENST00000544913 PON1P27169 355 aa7.58□□□□□ -1.2
HMGCS2-204ENST00000544913 PPP2R3AQ06190 1150 aa7.58□□□□□ -1.2
HMGCS2-204ENST00000544913 BMS1Q14692 1282 aaKnown RBP7.58□□□□□ -1.2
HMGCS2-204ENST00000544913 PCBP1Q15365 356 aaKnown RBP eCLIP7.58□□□□□ -1.2
HMGCS2-204ENST00000544913 MEA1Q16626 185 aa7.58□□□□□ -1.2
HMGCS2-204ENST00000544913 SLC10A6Q3KNW5 377 aa7.58□□□□□ -1.2
HMGCS2-204ENST00000544913 ZACNQ401N2 412 aa7.58□□□□□ -1.2
HMGCS2-204ENST00000544913 RAD9BQ6WBX8 426 aa7.58□□□□□ -1.2
HMGCS2-204ENST00000544913 SLC39A5Q6ZMH5 540 aa7.58□□□□□ -1.2
HMGCS2-204ENST00000544913 CATSPER4Q7RTX7 472 aa7.58□□□□□ -1.2
HMGCS2-204ENST00000544913 SMG8Q8ND04 991 aaKnown RBP7.58□□□□□ -1.2
HMGCS2-204ENST00000544913 OLIG1Q8TAK6 271 aa7.58□□□□□ -1.2
HMGCS2-204ENST00000544913 LINC01599Q8WXQ3 324 aa7.58□□□□□ -1.2
HMGCS2-204ENST00000544913 TSC1Q92574 1164 aa7.58□□□□□ -1.2
HMGCS2-204ENST00000544913 RABGGTAQ92696 567 aa7.58□□□□□ -1.2
HMGCS2-204ENST00000544913 CCDC127Q96BQ5 260 aa7.58□□□□□ -1.2
HMGCS2-204ENST00000544913 SCLT1Q96NL6 688 aa7.58□□□□□ -1.2
HMGCS2-204ENST00000544913 TSGA10Q9BZW7 698 aa7.58□□□□□ -1.2
HMGCS2-204ENST00000544913 MCOLN1Q9GZU1 580 aa7.58□□□□□ -1.2
HMGCS2-204ENST00000544913 NXF3Q9H4D5 531 aaKnown RBP7.58□□□□□ -1.2
HMGCS2-204ENST00000544913 PRDM10Q9NQV6 1147 aa7.58□□□□□ -1.2
HMGCS2-204ENST00000544913 RBAKQ9NYW8 714 aaPredicted RBP7.58□□□□□ -1.2
HMGCS2-204ENST00000544913 BCCIPQ9P287 314 aaKnown RBP eCLIP7.58□□□□□ -1.2
HMGCS2-204ENST00000544913 ST3GAL5Q9UNP4 418 aa7.58□□□□□ -1.2
HMGCS2-204ENST00000544913 MRFAP1Q9Y605 127 aa7.58□□□□□ -1.2
HMGCS2-204ENST00000544913 TRIP11Q15643 1979 aa7.58□□□□□ -1.2
HMGCS2-204ENST00000544913 PDCD11Q14690 1871 aaKnown RBP7.57□□□□□ -1.2
HMGCS2-204ENST00000544913 ZNF233A6NK53 670 aa7.57□□□□□ -1.2
HMGCS2-204ENST00000544913 MEIS3P2A8K0S8 358 aa7.57□□□□□ -1.2
HMGCS2-204ENST00000544913 KRT86O43790 486 aa7.57□□□□□ -1.2
HMGCS2-204ENST00000544913 NDUFA10O95299 355 aa7.57□□□□□ -1.2
HMGCS2-204ENST00000544913 C4BPAP04003 597 aaKnown RBP7.57□□□□□ -1.2
HMGCS2-204ENST00000544913 STAG3L1P0CL83 205 aa7.57□□□□□ -1.2
HMGCS2-204ENST00000544913 GHRP10912 638 aa7.57□□□□□ -1.2
HMGCS2-204ENST00000544913 H2AFXP16104 143 aaPredicted RBP7.57□□□□□ -1.2
HMGCS2-204ENST00000544913 HNRNPH3P31942 346 aaKnown RBP7.57□□□□□ -1.2
HMGCS2-204ENST00000544913 GRM5P41594 1212 aa7.57□□□□□ -1.2
HMGCS2-204ENST00000544913 GCLMP48507 274 aa7.57□□□□□ -1.2
HMGCS2-204ENST00000544913 TRIM60Q495X7 471 aa7.57□□□□□ -1.2
HMGCS2-204ENST00000544913 TDRD10Q5VZ19 366 aaKnown RBP7.57□□□□□ -1.2
HMGCS2-204ENST00000544913 LMBRD2Q68DH5 695 aaPredicted RBP7.57□□□□□ -1.2
HMGCS2-204ENST00000544913 SLC27A1Q6PCB7 646 aa7.57□□□□□ -1.2
HMGCS2-204ENST00000544913 ALKAL1Q6UXT8 129 aa7.57□□□□□ -1.2
HMGCS2-204ENST00000544913 SV2AQ7L0J3 742 aa7.57□□□□□ -1.2
HMGCS2-204ENST00000544913 THNSL1Q8IYQ7 743 aa7.57□□□□□ -1.2
HMGCS2-204ENST00000544913 TAS1R2Q8TE23 839 aa7.57□□□□□ -1.2
HMGCS2-204ENST00000544913 VTI1AQ96AJ9 217 aa7.57□□□□□ -1.2
HMGCS2-204ENST00000544913 SEZ6LQ9BYH1 1024 aa7.57□□□□□ -1.2
HMGCS2-204ENST00000544913 GPR88Q9GZN0 384 aa7.57□□□□□ -1.2
HMGCS2-204ENST00000544913 WNT8AQ9H1J5 351 aa7.57□□□□□ -1.2
HMGCS2-204ENST00000544913 KIAA1586Q9HCI6 787 aa7.57□□□□□ -1.2
HMGCS2-204ENST00000544913 PCDH10Q9P2E7 1040 aa7.57□□□□□ -1.2
HMGCS2-204ENST00000544913 CDC23Q9UJX2 597 aa7.57□□□□□ -1.2
HMGCS2-204ENST00000544913 TBX21Q9UL17 535 aa7.57□□□□□ -1.2
HMGCS2-204ENST00000544913 HES2Q9Y543 173 aa7.57□□□□□ -1.2
HMGCS2-204ENST00000544913 ALPK3Q96L96 1907 aa7.57□□□□□ -1.2
HMGCS2-204ENST00000544913 CITO14578 2027 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 SCN5AQ14524 2016 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 PES1O00541 588 aaKnown RBP7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 NBNO60934 754 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 ERLIN2O94905 339 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 NPTXRO95502 500 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 RPLP2P05387 115 aaKnown RBP7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 NFICP08651 508 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 AXLP30530 894 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 CD52P31358 61 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 OSTNP61366 133 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 MYL7Q01449 175 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 POU5F1Q01860 360 aaKnown RBP7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 TLE2Q04725 743 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 FAAP100Q0VG06 881 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 WHAMMP3Q1A5X7 153 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 ERCC6LQ2NKX8 1250 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 XKR4Q5GH76 650 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 KLHDC7AQ5VTJ3 777 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 TCERG1LQ5VWI1 586 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 NOTUMQ6P988 496 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 GJB7Q6PEY0 223 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 WDR59Q6PJI9 974 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 RSPH3Q86UC2 560 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 RTN4RL1Q86UN2 441 aaPredicted RBP7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 ANKLE1Q8NAG6 615 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 GOLGA1Q92805 767 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 ELMO3Q96BJ8 720 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 RPGRIP1Q96KN7 1286 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 ZMAT2Q96NC0 199 aaKnown RBP7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 TOX2Q96NM4 488 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 CGRRF1Q99675 332 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 NAPGQ99747 312 aaPredicted RBP7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 TRAIPQ9BWF2 469 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 INTS2Q9H0H0 1204 aaKnown RBP7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 PLCB1Q9NQ66 1216 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 FAM207AQ9NSI2 230 aaPredicted RBP7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 SIX4Q9UIU6 781 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 PADI3Q9ULW8 664 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms