RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 ZNF211Q13398 564 aaPredicted RBP10.93□□□□□ -0.66
PCDH9-204ENST00000544246 ZMYM1Q5SVZ6 1142 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 CCDC81Q6ZN84 652 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 CCDC149Q6ZUS6 474 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 UNC13DQ70J99 1090 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 PGBD4Q96DM1 585 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 FAM213AQ9BRX8 229 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 TSC22D2O75157 780 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 AKT1P31749 480 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 PSMC6P62333 389 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 LAMB3Q13751 1172 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 CCDC137Q6PK04 289 aaKnown RBP10.93□□□□□ -0.66
PCDH9-204ENST00000544246 CNPY4Q8N129 248 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 AGGF1Q8N302 714 aaeCLIP10.93□□□□□ -0.66
PCDH9-204ENST00000544246 GALNT4Q8N4A0 578 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 INTS2Q9H0H0 1204 aaKnown RBP10.93□□□□□ -0.66
PCDH9-204ENST00000544246 BHMT2Q9H2M3 363 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 SH3GLB2Q9NR46 395 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 ABHD10Q9NUJ1 306 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 CD274Q9NZQ7 290 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 PKP3Q9Y446 797 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 GCC2Q8IWJ2 1684 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 ZMYM4Q5VZL5 1548 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 SH2B2O14492 632 aaPredicted RBP10.93□□□□□ -0.66
PCDH9-204ENST00000544246 TRIM13O60858 407 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 CIAO1O76071 339 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 DYNLL1P63167 89 aaKnown RBP10.93□□□□□ -0.66
PCDH9-204ENST00000544246 LRRC36Q1X8D7 754 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 SHROOM1Q2M3G4 852 aaPredicted RBP10.93□□□□□ -0.66
PCDH9-204ENST00000544246 TRIM16LQ309B1 348 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 ARL6IP4Q66PJ3 421 aaKnown RBP10.93□□□□□ -0.66
PCDH9-204ENST00000544246 PID1Q7Z2X4 250 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 C10orf53Q8N6V4 93 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 XXYLT1Q8NBI6 393 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 MCPH1Q8NEM0 835 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 EAF2Q96CJ1 260 aaPredicted RBP10.93□□□□□ -0.66
PCDH9-204ENST00000544246 ZCWPW1Q9H0M4 648 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 ALG13Q9NP73 1137 aaKnown RBP10.93□□□□□ -0.66
PCDH9-204ENST00000544246 ARHGEF38Q9NXL2 777 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 XPO1O14980 1071 aaKnown RBP10.92□□□□□ -0.66
PCDH9-204ENST00000544246 CPB1P15086 417 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 ST8SIA6P61647 398 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 RPS6P62753 249 aaKnown RBP10.92□□□□□ -0.66
PCDH9-204ENST00000544246 DHX34Q14147 1143 aaKnown RBP10.92□□□□□ -0.66
PCDH9-204ENST00000544246 CCDC60Q8IWA6 550 aaPredicted RBP10.92□□□□□ -0.66
PCDH9-204ENST00000544246 PROM2Q8N271 834 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 RTL3Q8N8U3 475 aaKnown RBP10.92□□□□□ -0.66
PCDH9-204ENST00000544246 SSH3Q8TE77 659 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 DDI1Q8WTU0 396 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 OSBPL9Q96SU4 736 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 SIK2Q9H0K1 926 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 C2orf40Q9H1Z8 148 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 SNTNA6NMZ2 147 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 RHOBTB1O94844 696 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 MLH1P40692 756 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 PHKA1P46020 1223 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 GCLMP48507 274 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 ARSEP51690 589 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.92□□□□□ -0.66
PCDH9-204ENST00000544246 KLC1Q07866 573 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 ARMC6Q6NXE6 501 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 CLMNQ96JQ2 1002 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 RANBP17Q9H2T7 1088 aaKnown RBP10.92□□□□□ -0.66
PCDH9-204ENST00000544246 TRABDQ9H4I3 376 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 MRGBPQ9NV56 204 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 ZC3H4Q9UPT8 1303 aaKnown RBP10.92□□□□□ -0.66
PCDH9-204ENST00000544246 TEX28O15482 410 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 CLASP2O75122 1294 aaKnown RBP10.92□□□□□ -0.66
PCDH9-204ENST00000544246 SULT1E1P49888 294 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 KCNK10P57789 538 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 AP3B2Q13367 1082 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 CNGA2Q16280 664 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 TRIM72Q6ZMU5 477 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 RSPH1Q8WYR4 309 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 RBBP8Q99708 897 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 PARVAQ9NVD7 372 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 ZC3H7BQ9UGR2 993 aaKnown RBP10.92□□□□□ -0.66
PCDH9-204ENST00000544246 ABT1Q9ULW3 272 aaKnown RBP10.92□□□□□ -0.66
PCDH9-204ENST00000544246 MYL2P10916 166 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 HSD17B4P51659 736 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 CDK17Q00537 523 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 PKP1Q13835 747 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 SLC44A4Q53GD3 710 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 FAM102AQ5T9C2 384 aaPredicted RBP10.92□□□□□ -0.66
PCDH9-204ENST00000544246 TMC4Q7Z404 712 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 ZNF496Q96IT1 587 aaPredicted RBP10.92□□□□□ -0.66
PCDH9-204ENST00000544246 BATF3Q9NR55 127 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 MAP3K20Q9NYL2 800 aaKnown RBP10.92□□□□□ -0.66
PCDH9-204ENST00000544246 HSPBP1Q9NZL4 362 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 ADAM30Q9UKF2 790 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 APPL1Q9UKG1 709 aa10.92□□□□□ -0.66
PCDH9-204ENST00000544246 SMG5Q9UPR3 1016 aaKnown RBP10.92□□□□□ -0.66
PCDH9-204ENST00000544246 TCP11X1B4DZS4 312 aa10.91□□□□□ -0.66
PCDH9-204ENST00000544246 USP1O94782 785 aa10.91□□□□□ -0.66
PCDH9-204ENST00000544246 KLHL2O95198 593 aa10.91□□□□□ -0.66
PCDH9-204ENST00000544246 CDC25AP30304 524 aa10.91□□□□□ -0.66
PCDH9-204ENST00000544246 ACTR2P61160 394 aa10.91□□□□□ -0.66
PCDH9-204ENST00000544246 ANKMY2Q8IV38 441 aa10.91□□□□□ -0.66
PCDH9-204ENST00000544246 RIN3Q8TB24 985 aa10.91□□□□□ -0.66
PCDH9-204ENST00000544246 FHDC1Q9C0D6 1143 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms