RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 AP3M2P53677 418 aa18.3■□□□□ 0.52
PTPRO-209ENST00000543886 GUCY2DQ02846 1103 aa18.3■□□□□ 0.52
PTPRO-209ENST00000543886 ARHGAP1Q07960 439 aa18.3■□□□□ 0.52
PTPRO-209ENST00000543886 CUL2Q13617 745 aa18.3■□□□□ 0.52
PTPRO-209ENST00000543886 CLEC16AQ2KHT3 1053 aa18.3■□□□□ 0.52
PTPRO-209ENST00000543886 SPOPLQ6IQ16 392 aa18.3■□□□□ 0.52
PTPRO-209ENST00000543886 ACAD10Q6JQN1 1059 aa18.3■□□□□ 0.52
PTPRO-209ENST00000543886 MS4A4AQ96JQ5 239 aa18.3■□□□□ 0.52
PTPRO-209ENST00000543886 IMPG2Q9BZV3 1241 aa18.3■□□□□ 0.52
PTPRO-209ENST00000543886 GDF3Q9NR23 364 aa18.3■□□□□ 0.52
PTPRO-209ENST00000543886 GTF3C4Q9UKN8 822 aa18.3■□□□□ 0.52
PTPRO-209ENST00000543886 ALG6Q9Y672 507 aa18.3■□□□□ 0.52
PTPRO-209ENST00000543886 CCDC66A2RUB6 948 aa18.3■□□□□ 0.52
PTPRO-209ENST00000543886 MIF4GDA9UHW6 222 aaKnown RBP18.3■□□□□ 0.52
PTPRO-209ENST00000543886 OGTO15294 1046 aa18.3■□□□□ 0.52
PTPRO-209ENST00000543886 GH1P01241 217 aa18.3■□□□□ 0.52
PTPRO-209ENST00000543886 CYP1A2P05177 515 aa18.3■□□□□ 0.52
PTPRO-209ENST00000543886 TBXAS1P24557 533 aaPredicted RBP18.3■□□□□ 0.52
PTPRO-209ENST00000543886 GRM1Q13255 1194 aa18.3■□□□□ 0.52
PTPRO-209ENST00000543886 TMEM132AQ24JP5 1023 aa18.3■□□□□ 0.52
PTPRO-209ENST00000543886 EFCAB12Q6NXP0 572 aa18.3■□□□□ 0.52
PTPRO-209ENST00000543886 EMBQ6PCB8 327 aa18.3■□□□□ 0.52
PTPRO-209ENST00000543886 SND1Q7KZF4 910 aaKnown RBP eCLIP18.3■□□□□ 0.52
PTPRO-209ENST00000543886 ZNF677Q86XU0 584 aa18.3■□□□□ 0.52
PTPRO-209ENST00000543886 WDR49Q8IV35 697 aa18.3■□□□□ 0.52
PTPRO-209ENST00000543886 UBL4BQ8N7F7 174 aa18.3■□□□□ 0.52
PTPRO-209ENST00000543886 OR5B17Q8NGF7 314 aa18.3■□□□□ 0.52
PTPRO-209ENST00000543886 ZNF564Q8TBZ8 553 aaPredicted RBP18.3■□□□□ 0.52
PTPRO-209ENST00000543886 NUP85Q9BW27 656 aa18.3■□□□□ 0.52
PTPRO-209ENST00000543886 CARD9Q9H257 536 aa18.3■□□□□ 0.52
PTPRO-209ENST00000543886 EPB41L5Q9HCM4 733 aa18.3■□□□□ 0.52
PTPRO-209ENST00000543886 TTC7AQ9ULT0 858 aaPredicted RBP18.3■□□□□ 0.52
PTPRO-209ENST00000543886 RAD51CO43502 376 aa18.29■□□□□ 0.52
PTPRO-209ENST00000543886 TNFSF9P41273 254 aa18.29■□□□□ 0.52
PTPRO-209ENST00000543886 NOP14P78316 857 aaKnown RBP18.29■□□□□ 0.52
PTPRO-209ENST00000543886 MCL1Q07820 350 aa18.29■□□□□ 0.52
PTPRO-209ENST00000543886 PAK2Q13177 524 aa18.29■□□□□ 0.52
PTPRO-209ENST00000543886 NCOA4Q13772 614 aa18.29■□□□□ 0.52
PTPRO-209ENST00000543886 MESDQ14696 234 aa18.29■□□□□ 0.52
PTPRO-209ENST00000543886 ANKRD23Q86SG2 305 aa18.29■□□□□ 0.52
PTPRO-209ENST00000543886 ABRAQ8N0Z2 381 aa18.29■□□□□ 0.52
PTPRO-209ENST00000543886 NAP1L3Q99457 506 aaPredicted RBP18.29■□□□□ 0.52
PTPRO-209ENST00000543886 UVRAGQ9P2Y5 699 aa18.29■□□□□ 0.52
PTPRO-209ENST00000543886 INO80B-WBP1J3KQ70 363 aa18.29■□□□□ 0.52
PTPRO-209ENST00000543886 STRNO43815 780 aa18.29■□□□□ 0.52
PTPRO-209ENST00000543886 FAM189A1O60320 539 aa18.29■□□□□ 0.52
PTPRO-209ENST00000543886 CLTAP09496 248 aa18.29■□□□□ 0.52
PTPRO-209ENST00000543886 CLCN3P51790 818 aa18.29■□□□□ 0.52
PTPRO-209ENST00000543886 CLUL1Q15846 466 aa18.29■□□□□ 0.52
PTPRO-209ENST00000543886 ZNF484Q5JVG2 852 aa18.29■□□□□ 0.52
PTPRO-209ENST00000543886 TAPT1Q6NXT6 567 aa18.29■□□□□ 0.52
PTPRO-209ENST00000543886 BRI3BPQ8WY22 251 aa18.29■□□□□ 0.52
PTPRO-209ENST00000543886 FAM212AQ96EL1 285 aa18.29■□□□□ 0.52
PTPRO-209ENST00000543886 RNPC3Q96LT9 517 aaKnown RBP18.29■□□□□ 0.52
PTPRO-209ENST00000543886 RPS6KC1Q96S38 1066 aa18.29■□□□□ 0.52
PTPRO-209ENST00000543886 INO80BQ9C086 356 aaPredicted RBP18.29■□□□□ 0.52
PTPRO-209ENST00000543886 PLEKHA4Q9H4M7 779 aa18.29■□□□□ 0.52
PTPRO-209ENST00000543886 APOBEC3GQ9HC16 384 aaKnown RBP18.29■□□□□ 0.52
PTPRO-209ENST00000543886 MED4Q9NPJ6 270 aa18.29■□□□□ 0.52
PTPRO-209ENST00000543886 CHORDC1Q9UHD1 332 aaPredicted RBP18.29■□□□□ 0.52
PTPRO-209ENST00000543886 PCDHB4Q9Y5E5 795 aa18.29■□□□□ 0.52
PTPRO-209ENST00000543886 ASAP2O43150 1006 aa18.28■□□□□ 0.52
PTPRO-209ENST00000543886 GRIN3BO60391 1043 aa18.28■□□□□ 0.52
PTPRO-209ENST00000543886 CALCAP01258 141 aa18.28■□□□□ 0.52
PTPRO-209ENST00000543886 FGGP02679 453 aa18.28■□□□□ 0.52
PTPRO-209ENST00000543886 LGALS2P05162 132 aa18.28■□□□□ 0.52
PTPRO-209ENST00000543886 GJB1P08034 283 aa18.28■□□□□ 0.52
PTPRO-209ENST00000543886 FKBP1BP68106 108 aa18.28■□□□□ 0.52
PTPRO-209ENST00000543886 IGBP1P78318 339 aa18.28■□□□□ 0.52
PTPRO-209ENST00000543886 SURF1Q15526 300 aa18.28■□□□□ 0.52
PTPRO-209ENST00000543886 DCAF12L1Q5VU92 463 aa18.28■□□□□ 0.52
PTPRO-209ENST00000543886 MPZL3Q6UWV2 235 aa18.28■□□□□ 0.52
PTPRO-209ENST00000543886 TSHZ1Q6ZSZ6 1077 aa18.28■□□□□ 0.52
PTPRO-209ENST00000543886 IFT81Q8WYA0 676 aa18.28■□□□□ 0.52
PTPRO-209ENST00000543886 RNPEPQ9H4A4 650 aa18.28■□□□□ 0.52
PTPRO-209ENST00000543886 ZCCHC17Q9NP64 241 aaKnown RBP18.28■□□□□ 0.52
PTPRO-209ENST00000543886 MORF4L1Q9UBU8 362 aa18.28■□□□□ 0.52
PTPRO-209ENST00000543886 ACKR2O00590 384 aa18.27■□□□□ 0.52
PTPRO-209ENST00000543886 C22orf31O95567 290 aa18.27■□□□□ 0.52
PTPRO-209ENST00000543886 ZNF568Q3ZCX4 644 aa18.27■□□□□ 0.52
PTPRO-209ENST00000543886 GJC2Q5T442 439 aaPredicted RBP18.27■□□□□ 0.52
PTPRO-209ENST00000543886 ATF7IP2Q5U623 682 aa18.27■□□□□ 0.52
PTPRO-209ENST00000543886 ZNF467Q7Z7K2 595 aaPredicted RBP18.27■□□□□ 0.52
PTPRO-209ENST00000543886 PPTC7Q8NI37 304 aa18.27■□□□□ 0.52
PTPRO-209ENST00000543886 FAM71BQ8TC56 605 aa18.27■□□□□ 0.52
PTPRO-209ENST00000543886 ZBTB9Q96C00 473 aa18.27■□□□□ 0.52
PTPRO-209ENST00000543886 ZNF668Q96K58 619 aaPredicted RBP18.27■□□□□ 0.52
PTPRO-209ENST00000543886 GBA2Q9HCG7 927 aaPredicted RBP18.27■□□□□ 0.52
PTPRO-209ENST00000543886 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.27■□□□□ 0.52
PTPRO-209ENST00000543886 CNOT8Q9UFF9 292 aaKnown RBP18.27■□□□□ 0.52
PTPRO-209ENST00000543886 ESYT3A0FGR9 886 aa18.27■□□□□ 0.51
PTPRO-209ENST00000543886 ZSCAN5CA6NGD5 496 aaPredicted RBP18.27■□□□□ 0.51
PTPRO-209ENST00000543886 ACO1P21399 889 aaKnown RBP18.27■□□□□ 0.51
PTPRO-209ENST00000543886 COMTP21964 271 aa18.27■□□□□ 0.51
PTPRO-209ENST00000543886 AARSP49588 968 aaKnown RBP eCLIP18.27■□□□□ 0.51
PTPRO-209ENST00000543886 TMEM270Q6UE05 265 aa18.27■□□□□ 0.51
PTPRO-209ENST00000543886 CAVIN3Q969G5 261 aa18.27■□□□□ 0.51
PTPRO-209ENST00000543886 TRIM11Q96F44 468 aa18.27■□□□□ 0.51
PTPRO-209ENST00000543886 ZSWIM1Q9BR11 485 aa18.27■□□□□ 0.51
PTPRO-209ENST00000543886 DDX47Q9H0S4 455 aaKnown RBP18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms