RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 CCDC65Q8IXS2 484 aa11.22□□□□□ -0.61
NPIPB4-217ENST00000543449 IQUBQ8NA54 791 aa11.22□□□□□ -0.61
NPIPB4-217ENST00000543449 STAMQ92783 540 aa11.22□□□□□ -0.61
NPIPB4-217ENST00000543449 CLIC6Q96NY7 704 aa11.22□□□□□ -0.61
NPIPB4-217ENST00000543449 GPR62Q9BZJ7 368 aa11.22□□□□□ -0.61
NPIPB4-217ENST00000543449 TNMDQ9H2S6 317 aa11.22□□□□□ -0.61
NPIPB4-217ENST00000543449 OLFML3Q9NRN5 406 aa11.22□□□□□ -0.61
NPIPB4-217ENST00000543449 ZDHHC7Q9NXF8 308 aa11.22□□□□□ -0.61
NPIPB4-217ENST00000543449 USP20Q9Y2K6 914 aa11.22□□□□□ -0.61
NPIPB4-217ENST00000543449 PCDHB13Q9Y5F0 798 aa11.22□□□□□ -0.61
NPIPB4-217ENST00000543449 TTC28Q96AY4 2481 aa11.21□□□□□ -0.61
NPIPB4-217ENST00000543449 H7C4K7 107 aa11.21□□□□□ -0.61
NPIPB4-217ENST00000543449 SYN3O14994 580 aa11.21□□□□□ -0.61
NPIPB4-217ENST00000543449 KIF4AO95239 1232 aa11.21□□□□□ -0.61
NPIPB4-217ENST00000543449 EPCAMP16422 314 aa11.21□□□□□ -0.61
NPIPB4-217ENST00000543449 FGFR3P22607 806 aa11.21□□□□□ -0.61
NPIPB4-217ENST00000543449 OSTNP61366 133 aa11.21□□□□□ -0.61
NPIPB4-217ENST00000543449 RBM10P98175 930 aaKnown RBP11.21□□□□□ -0.61
NPIPB4-217ENST00000543449 PSMD5Q16401 504 aa11.21□□□□□ -0.61
NPIPB4-217ENST00000543449 RARS2Q5T160 578 aaKnown RBP11.21□□□□□ -0.61
NPIPB4-217ENST00000543449 CCDC149Q6ZUS6 474 aa11.21□□□□□ -0.61
NPIPB4-217ENST00000543449 DYMQ7RTS9 669 aa11.21□□□□□ -0.61
NPIPB4-217ENST00000543449 ZNF720Q7Z2F6 126 aa11.21□□□□□ -0.61
NPIPB4-217ENST00000543449 GPR149Q86SP6 731 aa11.21□□□□□ -0.61
NPIPB4-217ENST00000543449 CEP57Q86XR8 500 aa11.21□□□□□ -0.61
NPIPB4-217ENST00000543449 RNF135Q8IUD6 432 aa11.21□□□□□ -0.61
NPIPB4-217ENST00000543449 ACSF2Q96CM8 615 aaPredicted RBP11.21□□□□□ -0.61
NPIPB4-217ENST00000543449 ACCSQ96QU6 501 aa11.21□□□□□ -0.61
NPIPB4-217ENST00000543449 MSTO1Q9BUK6 570 aa11.21□□□□□ -0.61
NPIPB4-217ENST00000543449 OXCT2Q9BYC2 517 aaPredicted RBP11.21□□□□□ -0.61
NPIPB4-217ENST00000543449 TMEM206Q9H813 350 aa11.21□□□□□ -0.61
NPIPB4-217ENST00000543449 MRPL44Q9H9J2 332 aaKnown RBP11.21□□□□□ -0.61
NPIPB4-217ENST00000543449 RPF1Q9H9Y2 349 aaKnown RBP11.21□□□□□ -0.61
NPIPB4-217ENST00000543449 MAN1C1Q9NR34 630 aa11.21□□□□□ -0.61
NPIPB4-217ENST00000543449 UBQLN1Q9UMX0 589 aaKnown RBP11.21□□□□□ -0.61
NPIPB4-217ENST00000543449 DERAQ9Y315 318 aa11.21□□□□□ -0.61
NPIPB4-217ENST00000543449 NUB1Q9Y5A7 615 aa11.21□□□□□ -0.61
NPIPB4-217ENST00000543449 BACE2Q9Y5Z0 518 aa11.21□□□□□ -0.61
NPIPB4-217ENST00000543449 A0A0B4J269 797 aa11.2□□□□□ -0.62
NPIPB4-217ENST00000543449 PODXLO00592 558 aa11.2□□□□□ -0.62
NPIPB4-217ENST00000543449 KIAA0391O15091 583 aaKnown RBP11.2□□□□□ -0.62
NPIPB4-217ENST00000543449 PAPLNO95428 1278 aa11.2□□□□□ -0.62
NPIPB4-217ENST00000543449 LDHAP00338 332 aaKnown RBP11.2□□□□□ -0.62
NPIPB4-217ENST00000543449 HNRNPA1P09651 372 aaKnown RBP eCLIP11.2□□□□□ -0.62
NPIPB4-217ENST00000543449 IDEP14735 1019 aa11.2□□□□□ -0.62
NPIPB4-217ENST00000543449 CLCNKBP51801 687 aa11.2□□□□□ -0.62
NPIPB4-217ENST00000543449 UVSSAQ2YD98 709 aa11.2□□□□□ -0.62
NPIPB4-217ENST00000543449 GLRA4Q5JXX5 417 aa11.2□□□□□ -0.62
NPIPB4-217ENST00000543449 LIN9Q5TKA1 542 aa11.2□□□□□ -0.62
NPIPB4-217ENST00000543449 USP49Q70CQ1 688 aa11.2□□□□□ -0.62
NPIPB4-217ENST00000543449 OTOP3Q7RTS5 596 aa11.2□□□□□ -0.62
NPIPB4-217ENST00000543449 TAS1R1Q7RTX1 841 aa11.2□□□□□ -0.62
NPIPB4-217ENST00000543449 SFR1Q86XK3 245 aa11.2□□□□□ -0.62
NPIPB4-217ENST00000543449 NT5DC4Q86YG4 428 aa11.2□□□□□ -0.62
NPIPB4-217ENST00000543449 CEP120Q8N960 986 aa11.2□□□□□ -0.62
NPIPB4-217ENST00000543449 TDRD5Q8NAT2 981 aaKnown RBP11.2□□□□□ -0.62
NPIPB4-217ENST00000543449 APPL2Q8NEU8 664 aa11.2□□□□□ -0.62
NPIPB4-217ENST00000543449 ZBTB45Q96K62 511 aaPredicted RBP11.2□□□□□ -0.62
NPIPB4-217ENST00000543449 RPGRIP1Q96KN7 1286 aa11.2□□□□□ -0.62
NPIPB4-217ENST00000543449 ASB7Q9H672 318 aa11.2□□□□□ -0.62
NPIPB4-217ENST00000543449 CD320Q9NPF0 282 aa11.2□□□□□ -0.62
NPIPB4-217ENST00000543449 TFIP11Q9UBB9 837 aaKnown RBP11.2□□□□□ -0.62
NPIPB4-217ENST00000543449 MAFFQ9ULX9 164 aa11.2□□□□□ -0.62
NPIPB4-217ENST00000543449 STYXL1Q9Y6J8 313 aa11.2□□□□□ -0.62
NPIPB4-217ENST00000543449 MYH11P35749 1972 aa11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 NCOR1O75376 2440 aa11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 TTC26A0AVF1 554 aa11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 FRMD3A2A2Y4 597 aa11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 MYMKA6NI61 221 aa11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 PRR33A8MZF0 331 aa11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 ADRB2P07550 413 aa11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 POU2F2P09086 479 aa11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 NMT1P30419 496 aaKnown RBP11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 LRPAP1P30533 357 aa11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 HOXA9P31269 272 aa11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 ME1P48163 572 aa11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 KRT85P78386 507 aa11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 SLC10A6Q3KNW5 377 aa11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 RTP2Q5QGT7 225 aa11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 L1TD1Q5T7N2 865 aaKnown RBP11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 ADALQ6DHV7 355 aa11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 CNNM4Q6P4Q7 775 aa11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 ZDHHC14Q8IZN3 488 aa11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 KREMEN2Q8NCW0 462 aa11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 BEST2Q8NFU1 509 aa11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 LNX1Q8TBB1 728 aaPredicted RBP11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 LRRC15Q8TF66 581 aa11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 HASPINQ8TF76 798 aa11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 DNAJC19Q96DA6 116 aa11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 KIF12Q96FN5 646 aa11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 FIZ1Q96SL8 496 aa11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 PAAF1Q9BRP4 392 aa11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 APOL5Q9BWW9 433 aa11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 EPHX3Q9H6B9 360 aa11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 PIDD1Q9HB75 910 aa11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 PANK4Q9NVE7 773 aa11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 MTRRQ9UBK8 725 aa11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 USP25Q9UHP3 1055 aa11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 AGO2Q9UKV8 859 aaKnown RBP11.19□□□□□ -0.62
NPIPB4-217ENST00000543449 CCDC195A0A1B0GUA6 201 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms