RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 PTPN21Q16825 1174 aa14.35□□□□□ -0.11
TNFRSF1A-215ENST00000543359 SEZ6Q53EL9 994 aa14.35□□□□□ -0.11
TNFRSF1A-215ENST00000543359 RSPO2Q6UXX9 243 aaPredicted RBP14.35□□□□□ -0.11
TNFRSF1A-215ENST00000543359 BMP8AQ7Z5Y6 402 aa14.35□□□□□ -0.11
TNFRSF1A-215ENST00000543359 ZDHHC14Q8IZN3 488 aa14.35□□□□□ -0.11
TNFRSF1A-215ENST00000543359 LARP4BQ92615 738 aaKnown RBP14.35□□□□□ -0.11
TNFRSF1A-215ENST00000543359 ACAP3Q96P50 834 aa14.35□□□□□ -0.11
TNFRSF1A-215ENST00000543359 TCHPQ9BT92 498 aa14.35□□□□□ -0.11
TNFRSF1A-215ENST00000543359 CCDC94Q9BW85 323 aaPredicted RBP14.35□□□□□ -0.11
TNFRSF1A-215ENST00000543359 PARVGQ9HBI0 331 aa14.35□□□□□ -0.11
TNFRSF1A-215ENST00000543359 TOPORSQ9NS56 1045 aaPredicted RBP14.35□□□□□ -0.11
TNFRSF1A-215ENST00000543359 TBX20Q9UMR3 447 aa14.35□□□□□ -0.11
TNFRSF1A-215ENST00000543359 DOCK8Q8NF50 2099 aa14.34□□□□□ -0.11
TNFRSF1A-215ENST00000543359 CCDC195A0A1B0GUA6 201 aa14.34□□□□□ -0.11
TNFRSF1A-215ENST00000543359 N4BP1O75113 896 aaKnown RBP14.34□□□□□ -0.11
TNFRSF1A-215ENST00000543359 B3GAT3O94766 335 aa14.34□□□□□ -0.11
TNFRSF1A-215ENST00000543359 PIGRP01833 764 aa14.34□□□□□ -0.11
TNFRSF1A-215ENST00000543359 MYBP10242 640 aa14.34□□□□□ -0.11
TNFRSF1A-215ENST00000543359 NASPP49321 788 aaPredicted RBP14.34□□□□□ -0.11
TNFRSF1A-215ENST00000543359 YARSP54577 528 aaKnown RBP14.34□□□□□ -0.11
TNFRSF1A-215ENST00000543359 GTF2BQ00403 316 aa14.34□□□□□ -0.11
TNFRSF1A-215ENST00000543359 CEBPZQ03701 1054 aaKnown RBP14.34□□□□□ -0.11
TNFRSF1A-215ENST00000543359 ELAVL2Q12926 359 aaKnown RBP14.34□□□□□ -0.11
TNFRSF1A-215ENST00000543359 STRN3Q13033 797 aa14.34□□□□□ -0.11
TNFRSF1A-215ENST00000543359 NOLC1Q14978 699 aaKnown RBP eCLIP14.34□□□□□ -0.11
TNFRSF1A-215ENST00000543359 SLC39A4Q6P5W5 647 aa14.34□□□□□ -0.11
TNFRSF1A-215ENST00000543359 CYP26C1Q6V0L0 522 aa14.34□□□□□ -0.11
TNFRSF1A-215ENST00000543359 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.34□□□□□ -0.11
TNFRSF1A-215ENST00000543359 MYCT1Q8N699 235 aa14.34□□□□□ -0.11
TNFRSF1A-215ENST00000543359 C18orf25Q96B23 403 aaPredicted RBP14.34□□□□□ -0.11
TNFRSF1A-215ENST00000543359 ASIC4Q96FT7 647 aa14.34□□□□□ -0.11
TNFRSF1A-215ENST00000543359 UROC1Q96N76 676 aa14.34□□□□□ -0.11
TNFRSF1A-215ENST00000543359 PLEKHA4Q9H4M7 779 aa14.34□□□□□ -0.11
TNFRSF1A-215ENST00000543359 TSHZ2Q9NRE2 1034 aa14.34□□□□□ -0.11
TNFRSF1A-215ENST00000543359 CACNA1HO95180 2353 aa14.34□□□□□ -0.11
TNFRSF1A-215ENST00000543359 USP34Q70CQ2 3546 aa14.34□□□□□ -0.11
TNFRSF1A-215ENST00000543359 TMEM221A6NGB7 291 aa14.33□□□□□ -0.12
TNFRSF1A-215ENST00000543359 H0YCG3 227 aa14.33□□□□□ -0.12
TNFRSF1A-215ENST00000543359 M0R296 226 aa14.33□□□□□ -0.12
TNFRSF1A-215ENST00000543359 CLDN3O15551 220 aa14.33□□□□□ -0.12
TNFRSF1A-215ENST00000543359 TRAK2O60296 914 aa14.33□□□□□ -0.12
TNFRSF1A-215ENST00000543359 ADRB2P07550 413 aa14.33□□□□□ -0.12
TNFRSF1A-215ENST00000543359 HARSP12081 509 aaKnown RBP14.33□□□□□ -0.12
TNFRSF1A-215ENST00000543359 SCP2P22307 547 aa14.33□□□□□ -0.12
TNFRSF1A-215ENST00000543359 BRCC3P46736 316 aa14.33□□□□□ -0.12
TNFRSF1A-215ENST00000543359 CREMQ03060 361 aa14.33□□□□□ -0.12
TNFRSF1A-215ENST00000543359 ZBTB6Q15916 424 aa14.33□□□□□ -0.12
TNFRSF1A-215ENST00000543359 PSMD5Q16401 504 aa14.33□□□□□ -0.12
TNFRSF1A-215ENST00000543359 GLYCTKQ8IVS8 523 aa14.33□□□□□ -0.12
TNFRSF1A-215ENST00000543359 TMEM130Q8N3G9 435 aa14.33□□□□□ -0.12
TNFRSF1A-215ENST00000543359 KREMEN2Q8NCW0 462 aa14.33□□□□□ -0.12
TNFRSF1A-215ENST00000543359 DDX27Q96GQ7 796 aaKnown RBP14.33□□□□□ -0.12
TNFRSF1A-215ENST00000543359 STRA6Q9BX79 667 aa14.33□□□□□ -0.12
TNFRSF1A-215ENST00000543359 ST6GALNAC4Q9H4F1 302 aa14.33□□□□□ -0.12
TNFRSF1A-215ENST00000543359 ZSCAN16Q9H4T2 348 aaPredicted RBP14.33□□□□□ -0.12
TNFRSF1A-215ENST00000543359 WDR6Q9NNW5 1121 aaKnown RBP14.33□□□□□ -0.12
TNFRSF1A-215ENST00000543359 SLC38A7Q9NVC3 462 aa14.33□□□□□ -0.12
TNFRSF1A-215ENST00000543359 ANKFY1Q9P2R3 1169 aa14.33□□□□□ -0.12
TNFRSF1A-215ENST00000543359 MTRRQ9UBK8 725 aa14.33□□□□□ -0.12
TNFRSF1A-215ENST00000543359 LIMD1Q9UGP4 676 aa14.33□□□□□ -0.12
TNFRSF1A-215ENST00000543359 DPP7Q9UHL4 492 aa14.33□□□□□ -0.12
TNFRSF1A-215ENST00000543359 FBXW11Q9UKB1 542 aa14.33□□□□□ -0.12
TNFRSF1A-215ENST00000543359 A0A087X0B3 334 aa14.32□□□□□ -0.12
TNFRSF1A-215ENST00000543359 A0A0B4J269 797 aa14.32□□□□□ -0.12
TNFRSF1A-215ENST00000543359 TTC26A0AVF1 554 aa14.32□□□□□ -0.12
TNFRSF1A-215ENST00000543359 MYMKA6NI61 221 aa14.32□□□□□ -0.12
TNFRSF1A-215ENST00000543359 I3L4J1 428 aa14.32□□□□□ -0.12
TNFRSF1A-215ENST00000543359 TBC1D4O60343 1298 aa14.32□□□□□ -0.12
TNFRSF1A-215ENST00000543359 FAM13AO94988 1023 aa14.32□□□□□ -0.12
TNFRSF1A-215ENST00000543359 ASGR2P07307 311 aa14.32□□□□□ -0.12
TNFRSF1A-215ENST00000543359 TKTP29401 623 aaKnown RBP14.32□□□□□ -0.12
TNFRSF1A-215ENST00000543359 NMT1P30419 496 aaKnown RBP14.32□□□□□ -0.12
TNFRSF1A-215ENST00000543359 RPL9P32969 192 aaKnown RBP14.32□□□□□ -0.12
TNFRSF1A-215ENST00000543359 SIGLEC14Q08ET2 396 aa14.32□□□□□ -0.12
TNFRSF1A-215ENST00000543359 RAB33AQ14088 237 aa14.32□□□□□ -0.12
TNFRSF1A-215ENST00000543359 ZBTB41Q5SVQ8 909 aa14.32□□□□□ -0.12
TNFRSF1A-215ENST00000543359 CEP57Q86XR8 500 aa14.32□□□□□ -0.12
TNFRSF1A-215ENST00000543359 TDRD5Q8NAT2 981 aaKnown RBP14.32□□□□□ -0.12
TNFRSF1A-215ENST00000543359 DNAJC19Q96DA6 116 aa14.32□□□□□ -0.12
TNFRSF1A-215ENST00000543359 PRKD2Q9BZL6 878 aa14.32□□□□□ -0.12
TNFRSF1A-215ENST00000543359 SMOC2Q9H3U7 446 aa14.32□□□□□ -0.12
TNFRSF1A-215ENST00000543359 ZDHHC7Q9NXF8 308 aa14.32□□□□□ -0.12
TNFRSF1A-215ENST00000543359 STK17AQ9UEE5 414 aa14.32□□□□□ -0.12
TNFRSF1A-215ENST00000543359 BACE2Q9Y5Z0 518 aa14.32□□□□□ -0.12
TNFRSF1A-215ENST00000543359 MYH15Q9Y2K3 1946 aa14.31□□□□□ -0.12
TNFRSF1A-215ENST00000543359 VPS13AQ96RL7 3174 aa14.31□□□□□ -0.12
TNFRSF1A-215ENST00000543359 NOTCH4Q99466 2003 aa14.31□□□□□ -0.12
TNFRSF1A-215ENST00000543359 PODXLO00592 558 aa14.31□□□□□ -0.12
TNFRSF1A-215ENST00000543359 ZMYND10O75800 440 aa14.31□□□□□ -0.12
TNFRSF1A-215ENST00000543359 PPP1R37O75864 691 aa14.31□□□□□ -0.12
TNFRSF1A-215ENST00000543359 CLTAP09496 248 aa14.31□□□□□ -0.12
TNFRSF1A-215ENST00000543359 CXCL8P10145 99 aa14.31□□□□□ -0.12
TNFRSF1A-215ENST00000543359 TNFSF9P41273 254 aa14.31□□□□□ -0.12
TNFRSF1A-215ENST00000543359 MRPL58Q14197 206 aaKnown RBP14.31□□□□□ -0.12
TNFRSF1A-215ENST00000543359 RRAGBQ5VZM2 374 aa14.31□□□□□ -0.12
TNFRSF1A-215ENST00000543359 CCDC149Q6ZUS6 474 aa14.31□□□□□ -0.12
TNFRSF1A-215ENST00000543359 OTOP3Q7RTS5 596 aa14.31□□□□□ -0.12
TNFRSF1A-215ENST00000543359 ZNF720Q7Z2F6 126 aa14.31□□□□□ -0.12
TNFRSF1A-215ENST00000543359 MAP4K3Q8IVH8 894 aa14.31□□□□□ -0.12
TNFRSF1A-215ENST00000543359 PLCD3Q8N3E9 789 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms