RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 SCN10AQ9Y5Y9 1956 aa10.05□□□□□ -0.8
GNE-206ENST00000543356 B4GALT4O60513 344 aa10.05□□□□□ -0.8
GNE-206ENST00000543356 ERLIN2O94905 339 aa10.05□□□□□ -0.8
GNE-206ENST00000543356 GNRH1P01148 92 aa10.05□□□□□ -0.8
GNE-206ENST00000543356 BIRC3Q13489 604 aa10.05□□□□□ -0.8
GNE-206ENST00000543356 NAB2Q15742 525 aa10.05□□□□□ -0.8
GNE-206ENST00000543356 ENOX2Q16206 610 aaKnown RBP10.05□□□□□ -0.8
GNE-206ENST00000543356 LMBRD2Q68DH5 695 aaPredicted RBP10.05□□□□□ -0.8
GNE-206ENST00000543356 SLC30A5Q8TAD4 765 aa10.05□□□□□ -0.8
GNE-206ENST00000543356 FAM49AQ9H0Q0 323 aaPredicted RBP10.05□□□□□ -0.8
GNE-206ENST00000543356 NAGPAQ9UK23 515 aa10.05□□□□□ -0.8
GNE-206ENST00000543356 TFR2Q9UP52 801 aa10.05□□□□□ -0.8
GNE-206ENST00000543356 BTNL10A8MVZ5 291 aa10.05□□□□□ -0.8
GNE-206ENST00000543356 GPR25O00155 361 aa10.05□□□□□ -0.8
GNE-206ENST00000543356 ADAMTS4O75173 837 aa10.05□□□□□ -0.8
GNE-206ENST00000543356 CLTAP09496 248 aa10.05□□□□□ -0.8
GNE-206ENST00000543356 CHMP4BP1P59074 171 aa10.05□□□□□ -0.8
GNE-206ENST00000543356 TRIM32Q13049 653 aa10.05□□□□□ -0.8
GNE-206ENST00000543356 KIZQ2M2Z5 673 aa10.05□□□□□ -0.8
GNE-206ENST00000543356 DCAF4L1Q3SXM0 396 aa10.05□□□□□ -0.8
GNE-206ENST00000543356 WDR44Q5JSH3 913 aa10.05□□□□□ -0.8
GNE-206ENST00000543356 APBB1IPQ7Z5R6 666 aaPredicted RBP10.05□□□□□ -0.8
GNE-206ENST00000543356 NME8Q8N427 588 aa10.05□□□□□ -0.8
GNE-206ENST00000543356 C7orf31Q8N865 590 aa10.05□□□□□ -0.8
GNE-206ENST00000543356 OR5B17Q8NGF7 314 aa10.05□□□□□ -0.8
GNE-206ENST00000543356 KAT5Q92993 513 aa10.05□□□□□ -0.8
GNE-206ENST00000543356 HDAC6Q9UBN7 1215 aa10.05□□□□□ -0.8
GNE-206ENST00000543356 A0A1B0GUA9 196 aa10.04□□□□□ -0.8
GNE-206ENST00000543356 CTAGE9A4FU28 777 aa10.04□□□□□ -0.8
GNE-206ENST00000543356 DDX3XO00571 662 aaKnown RBP eCLIP10.04□□□□□ -0.84e-20■■■■■ 36.3
GNE-206ENST00000543356 TREHO43280 583 aa10.04□□□□□ -0.8
GNE-206ENST00000543356 HMGCRP04035 888 aa10.04□□□□□ -0.8
GNE-206ENST00000543356 PRKAR2AP13861 404 aaKnown RBP10.04□□□□□ -0.8
GNE-206ENST00000543356 DARSP14868 501 aaKnown RBP10.04□□□□□ -0.8
GNE-206ENST00000543356 CST5P28325 142 aaPredicted RBP10.04□□□□□ -0.8
GNE-206ENST00000543356 DUOXA2Q1HG44 320 aa10.04□□□□□ -0.8
GNE-206ENST00000543356 GNASQ5JWF2 1037 aa10.04□□□□□ -0.8
GNE-206ENST00000543356 MAP3K21Q5TCX8 1036 aa10.04□□□□□ -0.8
GNE-206ENST00000543356 THNSL1Q8IYQ7 743 aa10.04□□□□□ -0.8
GNE-206ENST00000543356 RNF10Q8N5U6 811 aaKnown RBP10.04□□□□□ -0.8
GNE-206ENST00000543356 LNX1Q8TBB1 728 aaPredicted RBP10.04□□□□□ -0.8
GNE-206ENST00000543356 CD99L2Q8TCZ2 262 aa10.04□□□□□ -0.8
GNE-206ENST00000543356 CPB2Q96IY4 423 aa10.04□□□□□ -0.8
GNE-206ENST00000543356 NAPGQ99747 312 aaPredicted RBP10.04□□□□□ -0.8
GNE-206ENST00000543356 RPF1Q9H9Y2 349 aaKnown RBP10.04□□□□□ -0.8
GNE-206ENST00000543356 INTUQ9ULD6 942 aa10.04□□□□□ -0.8
GNE-206ENST00000543356 CSDE1O75534 798 aaKnown RBP10.04□□□□□ -0.8
GNE-206ENST00000543356 TRPA1O75762 1119 aa10.04□□□□□ -0.8
GNE-206ENST00000543356 STAG3L1P0CL83 205 aa10.04□□□□□ -0.8
GNE-206ENST00000543356 CCND3P30281 292 aaPredicted RBP10.04□□□□□ -0.8
GNE-206ENST00000543356 VEGFBP49765 207 aa10.04□□□□□ -0.8
GNE-206ENST00000543356 NCOA4Q13772 614 aa10.04□□□□□ -0.8
GNE-206ENST00000543356 TUBB2AQ13885 445 aa10.04□□□□□ -0.8
GNE-206ENST00000543356 TAF2Q6P1X5 1199 aa10.04□□□□□ -0.8
GNE-206ENST00000543356 ALKBH5Q6P6C2 394 aaKnown RBP10.04□□□□□ -0.8
GNE-206ENST00000543356 CDR2LQ86X02 465 aaPredicted RBP10.04□□□□□ -0.8
GNE-206ENST00000543356 CEP120Q8N960 986 aa10.04□□□□□ -0.8
GNE-206ENST00000543356 ZNF784Q8NCA9 323 aaPredicted RBP10.04□□□□□ -0.8
GNE-206ENST00000543356 KLHDC9Q8NEP7 349 aa10.04□□□□□ -0.8
GNE-206ENST00000543356 DNAJB3Q8WWF6 145 aa10.04□□□□□ -0.8
GNE-206ENST00000543356 TATDN2Q93075 761 aa10.04□□□□□ -0.8
GNE-206ENST00000543356 FAM84AQ96KN4 292 aa10.04□□□□□ -0.8
GNE-206ENST00000543356 AGPAT1Q99943 283 aa10.04□□□□□ -0.8
GNE-206ENST00000543356 ADPGKQ9BRR6 497 aa10.04□□□□□ -0.8
GNE-206ENST00000543356 PI4K2AQ9BTU6 479 aa10.04□□□□□ -0.8
GNE-206ENST00000543356 TUBB2BQ9BVA1 445 aa10.04□□□□□ -0.8
GNE-206ENST00000543356 XPNPEP3Q9NQH7 507 aa10.04□□□□□ -0.8
GNE-206ENST00000543356 PHACTR2O75167 634 aa10.03□□□□□ -0.8
GNE-206ENST00000543356 URI1O94763 535 aaPredicted RBP10.03□□□□□ -0.8
GNE-206ENST00000543356 PGK1P00558 417 aa10.03□□□□□ -0.8
GNE-206ENST00000543356 ELNP15502 786 aa10.03□□□□□ -0.8
GNE-206ENST00000543356 TBXAS1P24557 533 aaPredicted RBP10.03□□□□□ -0.8
GNE-206ENST00000543356 AXLP30530 894 aa10.03□□□□□ -0.8
GNE-206ENST00000543356 GABPB1Q06547 395 aaPredicted RBP10.03□□□□□ -0.8
GNE-206ENST00000543356 NCBP1Q09161 790 aaKnown RBP10.03□□□□□ -0.8
GNE-206ENST00000543356 TRAPPC11Q7Z392 1133 aa10.03□□□□□ -0.8
GNE-206ENST00000543356 SESTD1Q86VW0 696 aa10.03□□□□□ -0.8
GNE-206ENST00000543356 EFCAB13Q8IY85 973 aa10.03□□□□□ -0.8
GNE-206ENST00000543356 TRIM58Q8NG06 486 aa10.03□□□□□ -0.8
GNE-206ENST00000543356 PXYLP1Q8TE99 480 aa10.03□□□□□ -0.8
GNE-206ENST00000543356 DHX38Q92620 1227 aaKnown RBP10.03□□□□□ -0.8
GNE-206ENST00000543356 MTMR12Q9C0I1 747 aa10.03□□□□□ -0.8
GNE-206ENST00000543356 GTF2IRD1Q9UHL9 959 aa10.03□□□□□ -0.8
GNE-206ENST00000543356 NOCTQ9UK39 431 aaKnown RBP10.03□□□□□ -0.8
GNE-206ENST00000543356 DUSP10Q9Y6W6 482 aa10.03□□□□□ -0.8
GNE-206ENST00000543356 ANO9A1A5B4 782 aa10.03□□□□□ -0.8
GNE-206ENST00000543356 MACROD2A1Z1Q3 448 aa10.03□□□□□ -0.8
GNE-206ENST00000543356 TACC1O75410 805 aa10.03□□□□□ -0.8
GNE-206ENST00000543356 ASS1P00966 412 aaKnown RBP10.03□□□□□ -0.8
GNE-206ENST00000543356 TNNC2P02585 160 aa10.03□□□□□ -0.8
GNE-206ENST00000543356 RPLP2P05387 115 aaKnown RBP10.03□□□□□ -0.8
GNE-206ENST00000543356 TMEM191BP0C7N4 346 aa10.03□□□□□ -0.8
GNE-206ENST00000543356 CXCL8P10145 99 aa10.03□□□□□ -0.8
GNE-206ENST00000543356 GRM5P41594 1212 aa10.03□□□□□ -0.8
GNE-206ENST00000543356 CRYBB1P53674 252 aaPredicted RBP10.03□□□□□ -0.8
GNE-206ENST00000543356 TMEM62Q0P6H9 643 aa10.03□□□□□ -0.8
GNE-206ENST00000543356 CUL2Q13617 745 aa10.03□□□□□ -0.8
GNE-206ENST00000543356 CATSPER4Q7RTX7 472 aa10.03□□□□□ -0.8
GNE-206ENST00000543356 EPS8L1Q8TE68 723 aa10.03□□□□□ -0.8
GNE-206ENST00000543356 PPP1R13LQ8WUF5 828 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms