RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 GSTTP1A0A1W2PQM5 241 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 VSTM5A8MXK1 200 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 WDR64B1ANS9 1081 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 LAD1O00515 517 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 OIP5O43482 229 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 NBNO60934 754 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 GJB6O95452 261 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 BMP15O95972 392 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 CCNE2O96020 404 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 F13A1P00488 732 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 LGALS2P05162 132 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 ZNF286BP0CG31 522 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 AMPD1P23109 780 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 SFNP31947 248 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 PSMC6P62333 389 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 ITGA7Q13683 1181 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 TMEM266Q2M3C6 531 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 FAM160B1Q5W0V3 765 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 ZNF385CQ66K41 422 aaPredicted RBP5.67□□□□□ -1.5
CLIP1-217ENST00000543205 NXNQ6DKJ4 435 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 CCDC70Q6NSX1 233 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 SLC39A5Q6ZMH5 540 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 MIER3Q7Z3K6 550 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 GALNT12Q8IXK2 581 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 SVOPQ8N4V2 548 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 WHAMMQ8TF30 809 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 ZNF396Q96N95 335 aaPredicted RBP5.67□□□□□ -1.5
CLIP1-217ENST00000543205 TMEM74Q96NL1 305 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 MTMR9Q96QG7 549 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 YIPF4Q9BSR8 244 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 HTATIP2Q9BUP3 242 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 NT5C1AQ9BXI3 368 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 TRIM8Q9BZR9 551 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 UNC45AQ9H3U1 944 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 SMARCAD1Q9H4L7 1026 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 TTC12Q9H892 705 aaPredicted RBP5.67□□□□□ -1.5
CLIP1-217ENST00000543205 ZNF302Q9NR11 478 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 DISC1Q9NRI5 854 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 NAGPAQ9UK23 515 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 ZNF215Q9UL58 517 aaPredicted RBP5.67□□□□□ -1.5
CLIP1-217ENST00000543205 TELO2Q9Y4R8 837 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 MYH7BA7E2Y1 1941 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 B2RBV5 119 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 EYA4O95677 639 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 SUPT20HL2P0C7V6 817 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 ACPPP15309 386 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 TECP42680 631 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 STAT5BP51692 787 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 GEMIN4P57678 1058 aaKnown RBP5.67□□□□□ -1.5
CLIP1-217ENST00000543205 NUCB2P80303 420 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 PPP2R5CQ13362 524 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 PKP1Q13835 747 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 KIAA0753Q2KHM9 967 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 PERM1Q5SV97 790 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 NCAPH2Q6IBW4 605 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 SWSAP1Q6NVH7 229 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 ELMSAN1Q6PJG2 1045 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 ABHD15Q6UXT9 468 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 UBE2Q1Q7Z7E8 422 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 C7orf31Q8N865 590 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 RDM1Q8NG50 284 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 TNPO1Q92973 898 aaKnown RBP5.67□□□□□ -1.5
CLIP1-217ENST00000543205 MDFIQ99750 246 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 C16orf70Q9BSU1 422 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 NOC4LQ9BVI4 516 aaKnown RBP5.67□□□□□ -1.5
CLIP1-217ENST00000543205 SEZ6LQ9BYH1 1024 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 RAB34Q9BZG1 259 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 TMEM60Q9H2L4 133 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 LATS2Q9NRM7 1088 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 AASDHPPTQ9NRN7 309 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 ERAP1Q9NZ08 941 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 ACTR10Q9NZ32 417 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 ZMYM5Q9UJ78 669 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 VAV3Q9UKW4 847 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 TLR6Q9Y2C9 796 aa5.67□□□□□ -1.5
CLIP1-217ENST00000543205 HTTP42858 3142 aa5.66□□□□□ -1.5
CLIP1-217ENST00000543205 SHISA8B8ZZ34 492 aa5.66□□□□□ -1.5
CLIP1-217ENST00000543205 ARVCFO00192 962 aa5.66□□□□□ -1.5
CLIP1-217ENST00000543205 GADD45BO75293 160 aaPredicted RBP5.66□□□□□ -1.5
CLIP1-217ENST00000543205 GARTP22102 1010 aa5.66□□□□□ -1.5
CLIP1-217ENST00000543205 MARK3P27448 753 aa5.66□□□□□ -1.5
CLIP1-217ENST00000543205 SOX5P35711 763 aa5.66□□□□□ -1.5
CLIP1-217ENST00000543205 PRPHP41219 470 aa5.66□□□□□ -1.5
CLIP1-217ENST00000543205 ATP2C1P98194 919 aaPredicted RBP5.66□□□□□ -1.5
CLIP1-217ENST00000543205 CEBPZQ03701 1054 aaKnown RBP5.66□□□□□ -1.5
CLIP1-217ENST00000543205 FAM47CQ5HY64 1035 aa5.66□□□□□ -1.5
CLIP1-217ENST00000543205 PSAPL1Q6NUJ1 521 aa5.66□□□□□ -1.5
CLIP1-217ENST00000543205 FAM173BQ6P4H8 233 aa5.66□□□□□ -1.5
CLIP1-217ENST00000543205 NFRKBQ6P4R8 1299 aa5.66□□□□□ -1.5
CLIP1-217ENST00000543205 DTHD1Q6ZMT9 781 aa5.66□□□□□ -1.5
CLIP1-217ENST00000543205 PLPPR4Q7Z2D5 763 aa5.66□□□□□ -1.5
CLIP1-217ENST00000543205 MICALL1Q8N3F8 863 aa5.66□□□□□ -1.5
CLIP1-217ENST00000543205 C4orf32Q8N8J7 132 aa5.66□□□□□ -1.5
CLIP1-217ENST00000543205 CCDC89Q8N998 374 aa5.66□□□□□ -1.5
CLIP1-217ENST00000543205 ERMNQ8TAM6 284 aa5.66□□□□□ -1.5
CLIP1-217ENST00000543205 DPF3Q92784 378 aa5.66□□□□□ -1.5
CLIP1-217ENST00000543205 KAT2BQ92831 832 aa5.66□□□□□ -1.5
CLIP1-217ENST00000543205 ATP6V0A1Q93050 837 aa5.66□□□□□ -1.5
CLIP1-217ENST00000543205 RHOVQ96L33 236 aa5.66□□□□□ -1.5
CLIP1-217ENST00000543205 PCYT2Q99447 389 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms