RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 STXBP2Q15833 593 aa20.32■□□□□ 0.84
HDAC4-215ENST00000543185 SLC18A3Q16572 532 aa20.32■□□□□ 0.84
HDAC4-215ENST00000543185 P3H2Q8IVL5 708 aa20.32■□□□□ 0.84
HDAC4-215ENST00000543185 RAD54LQ92698 747 aa20.32■□□□□ 0.84
HDAC4-215ENST00000543185 RAD21L1Q9H4I0 556 aa20.32■□□□□ 0.84
HDAC4-215ENST00000543185 PDZK1P1A8MUH7 402 aa20.32■□□□□ 0.84
HDAC4-215ENST00000543185 IGF2BP3O00425 579 aaKnown RBP eCLIP20.32■□□□□ 0.84
HDAC4-215ENST00000543185 ASNA1O43681 348 aa20.32■□□□□ 0.84
HDAC4-215ENST00000543185 KLHL12Q53G59 568 aa20.32■□□□□ 0.84
HDAC4-215ENST00000543185 FLCNQ8NFG4 579 aa20.32■□□□□ 0.84
HDAC4-215ENST00000543185 TTC7AQ9ULT0 858 aaPredicted RBP20.32■□□□□ 0.84
HDAC4-215ENST00000543185 PNMA8CA0A1B0GUJ8 204 aa20.32■□□□□ 0.84
HDAC4-215ENST00000543185 PEX5P50542 639 aa20.32■□□□□ 0.84
HDAC4-215ENST00000543185 CEP170Q5SW79 1584 aa20.32■□□□□ 0.84
HDAC4-215ENST00000543185 SERPINB12Q96P63 405 aa20.32■□□□□ 0.84
HDAC4-215ENST00000543185 PCIF1Q9H4Z3 704 aa20.32■□□□□ 0.84
HDAC4-215ENST00000543185 PAPOLBQ9NRJ5 636 aaKnown RBP20.32■□□□□ 0.84
HDAC4-215ENST00000543185 RWDD3Q9Y3V2 267 aa20.32■□□□□ 0.84
HDAC4-215ENST00000543185 TRMT5Q32P41 509 aaKnown RBP20.32■□□□□ 0.84
HDAC4-215ENST00000543185 RTL3Q8N8U3 475 aaKnown RBP20.32■□□□□ 0.84
HDAC4-215ENST00000543185 TBC1D22BQ9NU19 505 aa20.32■□□□□ 0.84
HDAC4-215ENST00000543185 HDAC6Q9UBN7 1215 aa20.32■□□□□ 0.84
HDAC4-215ENST00000543185 ZC3H7BQ9UGR2 993 aaKnown RBP20.32■□□□□ 0.84
HDAC4-215ENST00000543185 GSPT2Q8IYD1 628 aaKnown RBP20.32■□□□□ 0.84
HDAC4-215ENST00000543185 FMR1NBQ8N0W7 255 aaPredicted RBP20.32■□□□□ 0.84
HDAC4-215ENST00000543185 CCDC126Q96EE4 140 aa20.32■□□□□ 0.84
HDAC4-215ENST00000543185 FAM20AQ96MK3 541 aa20.32■□□□□ 0.84
HDAC4-215ENST00000543185 VCPKMTQ9H867 229 aa20.32■□□□□ 0.84
HDAC4-215ENST00000543185 FARP1Q9Y4F1 1045 aaPredicted RBP20.32■□□□□ 0.84
HDAC4-215ENST00000543185 FAM45BPQ6NSW5 357 aa20.32■□□□□ 0.84
HDAC4-215ENST00000543185 IYDQ6PHW0 289 aa20.32■□□□□ 0.84
HDAC4-215ENST00000543185 CLEC4MQ9H2X3 399 aaPredicted RBP20.32■□□□□ 0.84
HDAC4-215ENST00000543185 ESYT3A0FGR9 886 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 UBAP1LF5GYI3 381 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 ELMOD1Q8N336 334 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 XPO6Q96QU8 1125 aaKnown RBP20.31■□□□□ 0.84
HDAC4-215ENST00000543185 FAM153AQ9UHL3 310 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 LRFN2Q9ULH4 789 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 KPNA4O00629 521 aaPredicted RBP20.31■□□□□ 0.84
HDAC4-215ENST00000543185 BFSP2Q13515 415 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 RCN1Q15293 331 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 MIGA2Q7L4E1 593 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 DIS3LQ8TF46 1054 aaKnown RBP20.31■□□□□ 0.84
HDAC4-215ENST00000543185 SENP7Q9BQF6 1050 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 SLC40A1Q9NP59 571 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 RIC8BQ9NVN3 520 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 HUS1O60921 280 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 ARHGAP27Q6ZUM4 889 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 HPS5Q9UPZ3 1129 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 ANGPT1Q15389 498 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 CYB5D1Q6P9G0 228 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 FGD2Q7Z6J4 655 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 QKIQ96PU8 341 aaKnown RBP eCLIP20.31■□□□□ 0.842e-6■■■■□ 21.5
HDAC4-215ENST00000543185 MANSC1Q9H8J5 431 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 CASS4Q9NQ75 786 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 MTSS1O43312 755 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 FTLP02792 175 aaPredicted RBP20.31■□□□□ 0.84
HDAC4-215ENST00000543185 GNAT1P11488 350 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 HMOX2P30519 316 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 VAMP7P51809 220 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 PDXDC2PQ6P474 469 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 ZNF589Q86UQ0 364 aaPredicted RBP20.31■□□□□ 0.84
HDAC4-215ENST00000543185 JADE3Q92613 823 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 IQGAP3Q86VI3 1631 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 ATP5BP06576 529 aaKnown RBP20.31■□□□□ 0.84
HDAC4-215ENST00000543185 HPCAP84074 193 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 COASYQ13057 564 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 FNDC3AQ9Y2H6 1198 aaKnown RBP20.31■□□□□ 0.84
HDAC4-215ENST00000543185 KRT20P35900 424 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 PRCPP42785 496 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 PSMC6P62333 389 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 KDM7AQ6ZMT4 941 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 PAGR1Q9BTK6 254 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 MYO3BQ8WXR4 1341 aa20.31■□□□□ 0.84
HDAC4-215ENST00000543185 GTF2IP78347 998 aa20.3■□□□□ 0.84
HDAC4-215ENST00000543185 CHRNDQ07001 517 aa20.3■□□□□ 0.84
HDAC4-215ENST00000543185 DGKHQ86XP1 1220 aa20.3■□□□□ 0.84
HDAC4-215ENST00000543185 C2orf40Q9H1Z8 148 aa20.3■□□□□ 0.84
HDAC4-215ENST00000543185 CLPTM1O96005 669 aa20.3■□□□□ 0.84
HDAC4-215ENST00000543185 C1DQ13901 141 aaKnown RBP20.3■□□□□ 0.84
HDAC4-215ENST00000543185 NUP93Q8N1F7 819 aa20.3■□□□□ 0.84
HDAC4-215ENST00000543185 WDR35Q9P2L0 1181 aa20.3■□□□□ 0.84
HDAC4-215ENST00000543185 MYO9BQ13459 2157 aa20.3■□□□□ 0.84
HDAC4-215ENST00000543185 TLR2O60603 784 aa20.3■□□□□ 0.84
HDAC4-215ENST00000543185 FRMD8P1Q9BZ68 369 aaPredicted RBP20.3■□□□□ 0.84
HDAC4-215ENST00000543185 A0A1B0GTH6 734 aa20.3■□□□□ 0.84
HDAC4-215ENST00000543185 NNMTP40261 264 aa20.3■□□□□ 0.84
HDAC4-215ENST00000543185 PLOD1Q02809 727 aaPredicted RBP20.3■□□□□ 0.84
HDAC4-215ENST00000543185 WDR24Q96S15 920 aa20.3■□□□□ 0.84
HDAC4-215ENST00000543185 USP1O94782 785 aa20.3■□□□□ 0.84
HDAC4-215ENST00000543185 RC3H1Q5TC82 1133 aaKnown RBP20.3■□□□□ 0.84
HDAC4-215ENST00000543185 APOL4Q9BPW4 351 aa20.3■□□□□ 0.84
HDAC4-215ENST00000543185 CALB2P22676 271 aa20.3■□□□□ 0.84
HDAC4-215ENST00000543185 C6orf10Q5SRN2 563 aa20.3■□□□□ 0.84
HDAC4-215ENST00000543185 C19orf18Q8NEA5 215 aa20.3■□□□□ 0.84
HDAC4-215ENST00000543185 ATP1A1P05023 1023 aaKnown RBP20.29■□□□□ 0.84
HDAC4-215ENST00000543185 ILF2Q12905 390 aaKnown RBP20.29■□□□□ 0.84
HDAC4-215ENST00000543185 DRAP1Q14919 205 aaPredicted RBP20.29■□□□□ 0.84
HDAC4-215ENST00000543185 KCTD1Q719H9 257 aa20.29■□□□□ 0.84
HDAC4-215ENST00000543185 OR6P1Q8NGX9 317 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms