RNA–Protein interactions for RNA: ENST00000543093.1

CSF1R-209, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF1R, Length 921 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-209ENST00000543093 B3GAT3O94766 335 aa17.03■□□□□ 0.32
CSF1R-209ENST00000543093 LMNAP02545 664 aaKnown RBP17.03■□□□□ 0.32
CSF1R-209ENST00000543093 CCT6AP40227 531 aaKnown RBP17.03■□□□□ 0.32
CSF1R-209ENST00000543093 CLCNKBP51801 687 aa17.03■□□□□ 0.32
CSF1R-209ENST00000543093 EFNA5P52803 228 aa17.03■□□□□ 0.32
CSF1R-209ENST00000543093 PTGDRQ13258 359 aa17.03■□□□□ 0.32
CSF1R-209ENST00000543093 ECM1Q16610 540 aa17.03■□□□□ 0.32
CSF1R-209ENST00000543093 RILPL1Q5EBL4 403 aa17.03■□□□□ 0.32
CSF1R-209ENST00000543093 NT5DC1Q5TFE4 455 aa17.03■□□□□ 0.32
CSF1R-209ENST00000543093 ATF7IP2Q5U623 682 aa17.03■□□□□ 0.32
CSF1R-209ENST00000543093 MTSS1LQ765P7 747 aa17.03■□□□□ 0.32
CSF1R-209ENST00000543093 SHDQ96IW2 340 aa17.03■□□□□ 0.32
CSF1R-209ENST00000543093 PPP1R10Q96QC0 940 aaKnown RBP17.03■□□□□ 0.32
CSF1R-209ENST00000543093 BHMT2Q9H2M3 363 aa17.03■□□□□ 0.32
CSF1R-209ENST00000543093 SEMA4AQ9H3S1 761 aa17.03■□□□□ 0.32
CSF1R-209ENST00000543093 HCFC1R1Q9NWW0 138 aa17.03■□□□□ 0.32
CSF1R-209ENST00000543093 MTRRQ9UBK8 725 aa17.03■□□□□ 0.32
CSF1R-209ENST00000543093 STK24Q9Y6E0 443 aa17.03■□□□□ 0.32
CSF1R-209ENST00000543093 CDY1Q9Y6F8 540 aa17.03■□□□□ 0.32
CSF1R-209ENST00000543093 FANCMQ8IYD8 2048 aa17.03■□□□□ 0.32
CSF1R-209ENST00000543093 GVINP1Q7Z2Y8 2422 aa17.02■□□□□ 0.32
CSF1R-209ENST00000543093 I3L4J1 428 aa17.02■□□□□ 0.32
CSF1R-209ENST00000543093 LRRN2O75325 713 aa17.02■□□□□ 0.32
CSF1R-209ENST00000543093 SP9P0CG40 484 aa17.02■□□□□ 0.32
CSF1R-209ENST00000543093 GLULP15104 373 aa17.02■□□□□ 0.32
CSF1R-209ENST00000543093 MUTP22033 750 aa17.02■□□□□ 0.32
CSF1R-209ENST00000543093 ID4P47928 161 aa17.02■□□□□ 0.32
CSF1R-209ENST00000543093 STARD6P59095 220 aa17.02■□□□□ 0.32
CSF1R-209ENST00000543093 SNW1Q13573 536 aaKnown RBP17.02■□□□□ 0.32
CSF1R-209ENST00000543093 PABPC1LQ4VXU2 614 aaKnown RBP17.02■□□□□ 0.32
CSF1R-209ENST00000543093 RSPO2Q6UXX9 243 aaPredicted RBP17.02■□□□□ 0.32
CSF1R-209ENST00000543093 C1orf210Q8IVY1 113 aa17.02■□□□□ 0.32
CSF1R-209ENST00000543093 C4orf32Q8N8J7 132 aa17.02■□□□□ 0.32
CSF1R-209ENST00000543093 KIFAP3Q92845 792 aa17.02■□□□□ 0.32
CSF1R-209ENST00000543093 UROC1Q96N76 676 aa17.02■□□□□ 0.32
CSF1R-209ENST00000543093 KXD1Q9BQD3 176 aa17.02■□□□□ 0.32
CSF1R-209ENST00000543093 GOLGA2P5Q9HBQ8 144 aa17.02■□□□□ 0.32
CSF1R-209ENST00000543093 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.02■□□□□ 0.32
CSF1R-209ENST00000543093 LRWD1Q9UFC0 647 aa17.02■□□□□ 0.32
CSF1R-209ENST00000543093 PATJQ8NI35 1801 aa17.01■□□□□ 0.31
CSF1R-209ENST00000543093 K7ERI5 159 aa17.01■□□□□ 0.31
CSF1R-209ENST00000543093 POU2F2P09086 479 aa17.01■□□□□ 0.31
CSF1R-209ENST00000543093 TKTP29401 623 aaKnown RBP17.01■□□□□ 0.31
CSF1R-209ENST00000543093 PRPHP41219 470 aa17.01■□□□□ 0.31
CSF1R-209ENST00000543093 UPP1Q16831 310 aa17.01■□□□□ 0.31
CSF1R-209ENST00000543093 UVSSAQ2YD98 709 aa17.01■□□□□ 0.31
CSF1R-209ENST00000543093 LARP1BQ659C4 914 aaKnown RBP17.01■□□□□ 0.31
CSF1R-209ENST00000543093 CD300LGQ6UXG3 332 aa17.01■□□□□ 0.31
CSF1R-209ENST00000543093 APBB1IPQ7Z5R6 666 aaPredicted RBP17.01■□□□□ 0.31
CSF1R-209ENST00000543093 NPAS3Q8IXF0 933 aa17.01■□□□□ 0.31
CSF1R-209ENST00000543093 C3orf58Q8NDZ4 430 aa17.01■□□□□ 0.31
CSF1R-209ENST00000543093 SNX29Q8TEQ0 813 aa17.01■□□□□ 0.31
CSF1R-209ENST00000543093 ING5Q8WYH8 240 aa17.01■□□□□ 0.31
CSF1R-209ENST00000543093 DDX27Q96GQ7 796 aaKnown RBP17.01■□□□□ 0.31
CSF1R-209ENST00000543093 DNMT3BQ9UBC3 853 aaKnown RBP17.01■□□□□ 0.31
CSF1R-209ENST00000543093 KIAA1024Q9UPX6 916 aa17.01■□□□□ 0.31
CSF1R-209ENST00000543093 TNFSF13BQ9Y275 285 aa17.01■□□□□ 0.31
CSF1R-209ENST00000543093 BACE2Q9Y5Z0 518 aa17.01■□□□□ 0.31
CSF1R-209ENST00000543093 VPS13AQ96RL7 3174 aa17.01■□□□□ 0.31
CSF1R-209ENST00000543093 KANSL1LA0AUZ9 987 aa17■□□□□ 0.31
CSF1R-209ENST00000543093 TRAPPC3O43617 180 aa17■□□□□ 0.31
CSF1R-209ENST00000543093 BRCC3P46736 316 aa17■□□□□ 0.31
CSF1R-209ENST00000543093 CUL4AQ13619 759 aa17■□□□□ 0.31
CSF1R-209ENST00000543093 PDIA5Q14554 519 aa17■□□□□ 0.31
CSF1R-209ENST00000543093 MLF2Q15773 248 aaPredicted RBP17■□□□□ 0.31
CSF1R-209ENST00000543093 SLC44A4Q53GD3 710 aa17■□□□□ 0.31
CSF1R-209ENST00000543093 ZC3H14Q6PJT7 736 aaKnown RBP17■□□□□ 0.31
CSF1R-209ENST00000543093 ANKS3Q6ZW76 656 aa17■□□□□ 0.31
CSF1R-209ENST00000543093 CEP120Q8N960 986 aa17■□□□□ 0.31
CSF1R-209ENST00000543093 IGSF22Q8N9C0 903 aa17■□□□□ 0.31
CSF1R-209ENST00000543093 CCDC94Q9BW85 323 aaPredicted RBP17■□□□□ 0.31
CSF1R-209ENST00000543093 DDX19AQ9NUU7 478 aaKnown RBP17■□□□□ 0.31
CSF1R-209ENST00000543093 KCNH3Q9ULD8 1083 aa17■□□□□ 0.31
CSF1R-209ENST00000543093 CITO14578 2027 aa16.99■□□□□ 0.31
CSF1R-209ENST00000543093 PHLPP2Q6ZVD8 1323 aa16.99■□□□□ 0.31
CSF1R-209ENST00000543093 SMIM28A0A1B0GU29 152 aa16.99■□□□□ 0.31
CSF1R-209ENST00000543093 CCDC169A6NNP5 214 aa16.99■□□□□ 0.31
CSF1R-209ENST00000543093 GRM5P41594 1212 aa16.99■□□□□ 0.31
CSF1R-209ENST00000543093 YARSP54577 528 aaKnown RBP16.99■□□□□ 0.31
CSF1R-209ENST00000543093 PEX3P56589 373 aa16.99■□□□□ 0.31
CSF1R-209ENST00000543093 OSTNP61366 133 aa16.99■□□□□ 0.31
CSF1R-209ENST00000543093 SOX4Q06945 474 aaPredicted RBP16.99■□□□□ 0.31
CSF1R-209ENST00000543093 UBXN2BQ14CS0 331 aa16.99■□□□□ 0.31
CSF1R-209ENST00000543093 ZNF568Q3ZCX4 644 aa16.99■□□□□ 0.31
CSF1R-209ENST00000543093 DTHD1Q6ZMT9 781 aa16.99■□□□□ 0.31
CSF1R-209ENST00000543093 RTL10Q7L3V2 364 aa16.99■□□□□ 0.31
CSF1R-209ENST00000543093 ERMP1Q7Z2K6 904 aa16.99■□□□□ 0.31
CSF1R-209ENST00000543093 CDT1Q9H211 546 aa16.99■□□□□ 0.31
CSF1R-209ENST00000543093 DAXXQ9UER7 740 aaPredicted RBP16.99■□□□□ 0.31
CSF1R-209ENST00000543093 MRPS23Q9Y3D9 190 aaKnown RBP16.99■□□□□ 0.31
CSF1R-209ENST00000543093 CACNA1IQ9P0X4 2223 aa16.98■□□□□ 0.31
CSF1R-209ENST00000543093 NPTX2P47972 431 aa16.98■□□□□ 0.31
CSF1R-209ENST00000543093 ATP2C1P98194 919 aaPredicted RBP16.98■□□□□ 0.31
CSF1R-209ENST00000543093 PFKPQ01813 784 aa16.98■□□□□ 0.31
CSF1R-209ENST00000543093 PRKCQQ04759 706 aa16.98■□□□□ 0.31
CSF1R-209ENST00000543093 KRT79Q5XKE5 535 aa16.98■□□□□ 0.31
CSF1R-209ENST00000543093 MCRS1Q96EZ8 462 aa16.98■□□□□ 0.31
CSF1R-209ENST00000543093 ACO2Q99798 780 aaKnown RBP16.98■□□□□ 0.31
CSF1R-209ENST00000543093 HINFPQ9BQA5 517 aa16.98■□□□□ 0.31
CSF1R-209ENST00000543093 DDX23Q9BUQ8 820 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms