RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 CNGA1P29973 690 aa17.72■□□□□ 0.43
KDM2B-216ENST00000543025 MRPS9P82933 396 aaKnown RBP17.72■□□□□ 0.43
KDM2B-216ENST00000543025 FAM102BQ5T8I3 360 aa17.72■□□□□ 0.43
KDM2B-216ENST00000543025 ANGEL2Q5VTE6 544 aaKnown RBP17.72■□□□□ 0.43
KDM2B-216ENST00000543025 EXOC3L1Q86VI1 746 aa17.72■□□□□ 0.43
KDM2B-216ENST00000543025 MCF2L2Q86YR7 1114 aa17.72■□□□□ 0.43
KDM2B-216ENST00000543025 MAP4K3Q8IVH8 894 aa17.72■□□□□ 0.43
KDM2B-216ENST00000543025 POP1Q99575 1024 aaKnown RBP17.72■□□□□ 0.43
KDM2B-216ENST00000543025 TMEM39BQ9GZU3 492 aa17.72■□□□□ 0.43
KDM2B-216ENST00000543025 ITIH2P19823 946 aa17.72■□□□□ 0.43
KDM2B-216ENST00000543025 IFNAR2P48551 515 aa17.72■□□□□ 0.43
KDM2B-216ENST00000543025 GSCP56915 257 aaPredicted RBP17.72■□□□□ 0.43
KDM2B-216ENST00000543025 UGCGQ16739 394 aa17.72■□□□□ 0.43
KDM2B-216ENST00000543025 USP37Q86T82 979 aa17.72■□□□□ 0.43
KDM2B-216ENST00000543025 C1orf54Q8WWF1 131 aa17.72■□□□□ 0.43
KDM2B-216ENST00000543025 SERPINB12Q96P63 405 aa17.72■□□□□ 0.43
KDM2B-216ENST00000543025 ELAC2Q9BQ52 826 aaKnown RBP17.72■□□□□ 0.43
KDM2B-216ENST00000543025 GLIS2Q9BZE0 524 aaPredicted RBP17.72■□□□□ 0.43
KDM2B-216ENST00000543025 GGA3Q9NZ52 723 aa17.72■□□□□ 0.43
KDM2B-216ENST00000543025 ASIC3Q9UHC3 531 aa17.72■□□□□ 0.43
KDM2B-216ENST00000543025 ANAPC7Q9UJX3 599 aa17.72■□□□□ 0.43
KDM2B-216ENST00000543025 TP73O15350 636 aa17.71■□□□□ 0.43
KDM2B-216ENST00000543025 ATP5DP30049 168 aa17.71■□□□□ 0.43
KDM2B-216ENST00000543025 MAPK4P31152 587 aa17.71■□□□□ 0.43
KDM2B-216ENST00000543025 MAN1A1P33908 653 aa17.71■□□□□ 0.43
KDM2B-216ENST00000543025 EPHX2P34913 555 aa17.71■□□□□ 0.43
KDM2B-216ENST00000543025 PSMC5P62195 406 aa17.71■□□□□ 0.43
KDM2B-216ENST00000543025 LONRF1Q17RB8 773 aa17.71■□□□□ 0.43
KDM2B-216ENST00000543025 CCDC38Q502W7 563 aa17.71■□□□□ 0.43
KDM2B-216ENST00000543025 TRMT1LQ7Z2T5 733 aaKnown RBP17.71■□□□□ 0.43
KDM2B-216ENST00000543025 CDAN1Q8IWY9 1227 aa17.71■□□□□ 0.43
KDM2B-216ENST00000543025 TMEM161BQ8NDZ6 487 aa17.71■□□□□ 0.43
KDM2B-216ENST00000543025 TAS1R2Q8TE23 839 aa17.71■□□□□ 0.43
KDM2B-216ENST00000543025 MAIP1Q8WWC4 291 aa17.71■□□□□ 0.43
KDM2B-216ENST00000543025 CLEC4DQ8WXI8 215 aa17.71■□□□□ 0.43
KDM2B-216ENST00000543025 AAASQ9NRG9 546 aa17.71■□□□□ 0.43
KDM2B-216ENST00000543025 SLC12A4Q9UP95 1085 aa17.71■□□□□ 0.43
KDM2B-216ENST00000543025 TBC1D12O60347 775 aa17.71■□□□□ 0.43
KDM2B-216ENST00000543025 ACSL3O95573 720 aa17.71■□□□□ 0.43
KDM2B-216ENST00000543025 DMP1Q13316 513 aaPredicted RBP17.71■□□□□ 0.43
KDM2B-216ENST00000543025 TNFAIP1Q13829 316 aa17.71■□□□□ 0.43
KDM2B-216ENST00000543025 CLEC16AQ2KHT3 1053 aa17.71■□□□□ 0.43
KDM2B-216ENST00000543025 XKR9Q5GH70 373 aa17.71■□□□□ 0.43
KDM2B-216ENST00000543025 RHBDF2Q6PJF5 856 aa17.71■□□□□ 0.43
KDM2B-216ENST00000543025 SYDE1Q6ZW31 735 aaPredicted RBP17.71■□□□□ 0.43
KDM2B-216ENST00000543025 TMC2Q8TDI7 906 aa17.71■□□□□ 0.43
KDM2B-216ENST00000543025 DDX23Q9BUQ8 820 aaKnown RBP17.71■□□□□ 0.43
KDM2B-216ENST00000543025 GTF2H1P32780 548 aa17.7■□□□□ 0.42
KDM2B-216ENST00000543025 GHRHRQ02643 423 aa17.7■□□□□ 0.42
KDM2B-216ENST00000543025 LLGL1Q15334 1064 aa17.7■□□□□ 0.42
KDM2B-216ENST00000543025 TRPM8Q7Z2W7 1104 aa17.7■□□□□ 0.42
KDM2B-216ENST00000543025 GRK7Q8WTQ7 553 aa17.7■□□□□ 0.42
KDM2B-216ENST00000543025 DYDC1Q8WWB3 177 aa17.7■□□□□ 0.42
KDM2B-216ENST00000543025 DHX38Q92620 1227 aaKnown RBP17.7■□□□□ 0.42
KDM2B-216ENST00000543025 ARHGEF2Q92974 986 aaKnown RBP17.7■□□□□ 0.42
KDM2B-216ENST00000543025 SNF8Q96H20 258 aa17.7■□□□□ 0.42
KDM2B-216ENST00000543025 FAM81BQ96LP2 452 aa17.7■□□□□ 0.42
KDM2B-216ENST00000543025 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.7■□□□□ 0.427e-9■■■■■ 32
KDM2B-216ENST00000543025 PGAP2Q9UHJ9 254 aa17.7■□□□□ 0.42
KDM2B-216ENST00000543025 TCEAL9Q9UHQ7 104 aa17.7■□□□□ 0.42
KDM2B-216ENST00000543025 ZNFX1Q9P2E3 1918 aaKnown RBP17.7■□□□□ 0.42
KDM2B-216ENST00000543025 MAP2K2P36507 400 aa17.7■□□□□ 0.42
KDM2B-216ENST00000543025 NPTX2P47972 431 aa17.7■□□□□ 0.42
KDM2B-216ENST00000543025 JAK3P52333 1124 aa17.7■□□□□ 0.42
KDM2B-216ENST00000543025 SNX1Q13596 522 aa17.7■□□□□ 0.42
KDM2B-216ENST00000543025 PLA2G4FQ68DD2 849 aa17.7■□□□□ 0.42
KDM2B-216ENST00000543025 APOBEC3FQ8IUX4 373 aaKnown RBP17.7■□□□□ 0.42
KDM2B-216ENST00000543025 MAGEC3Q8TD91 643 aa17.7■□□□□ 0.42
KDM2B-216ENST00000543025 CHST7Q9NS84 486 aa17.7■□□□□ 0.42
KDM2B-216ENST00000543025 ANKEF1Q9NU02 776 aa17.7■□□□□ 0.42
KDM2B-216ENST00000543025 GEMIN8Q9NWZ8 242 aaKnown RBP17.7■□□□□ 0.42
KDM2B-216ENST00000543025 DENND3A2RUS2 1198 aa17.69■□□□□ 0.42
KDM2B-216ENST00000543025 MGRN1O60291 552 aa17.69■□□□□ 0.42
KDM2B-216ENST00000543025 KRT5P13647 590 aa17.69■□□□□ 0.42
KDM2B-216ENST00000543025 PTK6Q13882 451 aa17.69■□□□□ 0.42
KDM2B-216ENST00000543025 ENOSF1Q7L5Y1 443 aa17.69■□□□□ 0.42
KDM2B-216ENST00000543025 MFSD14AQ96MC6 490 aa17.69■□□□□ 0.42
KDM2B-216ENST00000543025 FBXL18Q96ME1 805 aa17.69■□□□□ 0.42
KDM2B-216ENST00000543025 MYCBPQ99417 103 aaPredicted RBP17.69■□□□□ 0.42
KDM2B-216ENST00000543025 KIFC3Q9BVG8 833 aa17.69■□□□□ 0.42
KDM2B-216ENST00000543025 TOPORSQ9NS56 1045 aaPredicted RBP17.69■□□□□ 0.42
KDM2B-216ENST00000543025 TPX2Q9ULW0 747 aaKnown RBP17.69■□□□□ 0.42
KDM2B-216ENST00000543025 IQCA1LA6NCM1 817 aa17.69■□□□□ 0.42
KDM2B-216ENST00000543025 WDR64B1ANS9 1081 aa17.69■□□□□ 0.42
KDM2B-216ENST00000543025 SNX3O60493 162 aa17.69■□□□□ 0.42
KDM2B-216ENST00000543025 GAS8O95995 478 aa17.69■□□□□ 0.42
KDM2B-216ENST00000543025 SCP2P22307 547 aa17.69■□□□□ 0.42
KDM2B-216ENST00000543025 CHKAP35790 457 aa17.69■□□□□ 0.42
KDM2B-216ENST00000543025 SLC1A1P43005 524 aa17.69■□□□□ 0.42
KDM2B-216ENST00000543025 IRX3P78415 501 aaPredicted RBP17.69■□□□□ 0.42
KDM2B-216ENST00000543025 GCNT1Q02742 428 aa17.69■□□□□ 0.42
KDM2B-216ENST00000543025 CAV1Q03135 178 aa17.69■□□□□ 0.42
KDM2B-216ENST00000543025 MKRN4PQ13434 485 aaPredicted RBP17.69■□□□□ 0.42
KDM2B-216ENST00000543025 USP50Q70EL3 339 aaPredicted RBP17.69■□□□□ 0.42
KDM2B-216ENST00000543025 SV2AQ7L0J3 742 aa17.69■□□□□ 0.42
KDM2B-216ENST00000543025 SYTL5Q8TDW5 730 aaPredicted RBP17.69■□□□□ 0.42
KDM2B-216ENST00000543025 TACO1Q9BSH4 297 aaKnown RBP17.69■□□□□ 0.42
KDM2B-216ENST00000543025 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.69■□□□□ 0.42
KDM2B-216ENST00000543025 TTC4O95801 387 aa17.68■□□□□ 0.42
KDM2B-216ENST00000543025 ASNSP08243 561 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms