RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 NOTCH4Q99466 2003 aa3.71□□□□□ -1.81
CHD4-209ENST00000542717 ANO9A1A5B4 782 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 A1L4Q6 167 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 TRIM6-TRIM34B2RNG4 842 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 M0R2C6 588 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 ARNTLO00327 626 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 NRG2O14511 850 aaPredicted RBP3.71□□□□□ -1.82
CHD4-209ENST00000542717 PRRG1O14668 218 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 AP5Z1O43299 807 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 HBP1O60381 514 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 CBFA2T3O75081 653 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 GPR32O75388 356 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 TADA2AO75478 443 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 CSDE1O75534 798 aaKnown RBP3.71□□□□□ -1.82
CHD4-209ENST00000542717 BCAR3O75815 825 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 ALDH1A2O94788 518 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 AGFG2O95081 481 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 EGFP01133 1207 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 POU2F2P09086 479 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 IFIT2P09913 472 aaKnown RBP3.71□□□□□ -1.82
CHD4-209ENST00000542717 MYL4P12829 197 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 GNSP15586 552 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 GJA1P17302 382 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 GNAT2P19087 354 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 TMOD1P28289 359 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 ELF1P32519 619 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 RAB27AP51159 221 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 CLDN6P56747 220 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 PCBP4P57723 403 aaKnown RBP3.71□□□□□ -1.82
CHD4-209ENST00000542717 AMPD2Q01433 879 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 RPL6Q02878 288 aaKnown RBP3.71□□□□□ -1.82
CHD4-209ENST00000542717 PPARAQ07869 468 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 TARDBPQ13148 414 aaKnown RBP eCLIP3.71□□□□□ -1.82
CHD4-209ENST00000542717 BYSLQ13895 437 aaKnown RBP3.71□□□□□ -1.82
CHD4-209ENST00000542717 POLA2Q14181 598 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 NAA30Q147X3 362 aaPredicted RBP3.71□□□□□ -1.82
CHD4-209ENST00000542717 SART3Q15020 963 aaKnown RBP3.71□□□□□ -1.82
CHD4-209ENST00000542717 IGFBP7Q16270 282 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 PSMD5Q16401 504 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 ITPRIPL2Q3MIP1 535 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 ARHGAP29Q52LW3 1261 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 TMEM196Q5HYL7 178 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 IQCEQ6IPM2 695 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 FSTL4Q6MZW2 842 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.71□□□□□ -1.82
CHD4-209ENST00000542717 TMC8Q8IU68 726 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 CKAP2LQ8IYA6 745 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 ADGRF4Q8IZF3 695 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 ELMOD1Q8N336 334 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 KCNE4Q8WWG9 221 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 NLRP7Q8WX94 980 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 EXOC4Q96A65 974 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 HIC2Q96JB3 615 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 CDHR1Q96JP9 859 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 CNOT6LQ96LI5 555 aaKnown RBP3.71□□□□□ -1.82
CHD4-209ENST00000542717 ZSWIM3Q96MP5 696 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 PCYT2Q99447 389 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 GPR62Q9BZJ7 368 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 NRSN2Q9GZP1 204 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 BOLA2Q9H3K6 86 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 RSAD1Q9HA92 442 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 CHST7Q9NS84 486 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 TOR4AQ9NXH8 423 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 SNTG2Q9NY99 539 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.71□□□□□ -1.82
CHD4-209ENST00000542717 PIN4Q9Y237 131 aaKnown RBP3.71□□□□□ -1.82
CHD4-209ENST00000542717 NID2Q14112 1375 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 SETD2Q9BYW2 2564 aaPredicted RBP3.71□□□□□ -1.82
CHD4-209ENST00000542717 EVPLQ92817 2033 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 SVILO95425 2214 aa3.71□□□□□ -1.82
CHD4-209ENST00000542717 KIF26AQ9ULI4 1882 aaPredicted RBP3.71□□□□□ -1.82
CHD4-209ENST00000542717 USP9YO00507 2555 aaPredicted RBP3.7□□□□□ -1.82
CHD4-209ENST00000542717 COL4A2P08572 1712 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 CLEC18AA5D8T8 446 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 VPS37CA5D8V6 355 aaPredicted RBP3.7□□□□□ -1.82
CHD4-209ENST00000542717 F8W810 466 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 FLRT2O43155 660 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 TNFSF14O43557 240 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 GJB3O75712 270 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 SFTPCP11686 197 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 DRD1P21728 446 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 SFPQP23246 707 aaKnown RBP eCLIP3.7□□□□□ -1.82
CHD4-209ENST00000542717 U2AF2P26368 475 aaKnown RBP eCLIP3.7□□□□□ -1.823e-8■■□□□ 11.5
CHD4-209ENST00000542717 COL8A1P27658 744 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 OR1D2P34982 312 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 CLCN3P51790 818 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 AFF1P51825 1210 aaKnown RBP3.7□□□□□ -1.82
CHD4-209ENST00000542717 FOSBP53539 338 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 CTDSPL2Q05D32 466 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 ZNF33AQ06730 810 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 TNK2Q07912 1038 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 MYO1EQ12965 1108 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 RTP5Q14D33 572 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 NCAPHQ15003 741 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 SUZ12Q15022 739 aaKnown RBP3.7□□□□□ -1.82
CHD4-209ENST00000542717 TEAD2Q15562 447 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 TBC1D25Q3MII6 688 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 FBXO43Q4G163 708 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 ZNF484Q5JVG2 852 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 PRSS36Q5K4E3 855 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms