RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 C9orf50Q5SZB4 431 aa25.03■■□□□ 1.6
HOMER3-205ENST00000542541 GSTCDQ8NEC7 633 aa25.03■■□□□ 1.6
HOMER3-205ENST00000542541 KIF12Q96FN5 646 aa25.03■■□□□ 1.6
HOMER3-205ENST00000542541 ZBED2Q9BTP6 218 aa25.03■■□□□ 1.6
HOMER3-205ENST00000542541 MRPL9Q9BYD2 267 aaKnown RBP25.03■■□□□ 1.6
HOMER3-205ENST00000542541 RNF19AQ9NV58 838 aa25.03■■□□□ 1.6
HOMER3-205ENST00000542541 SCNN1GP51170 649 aa25.02■■□□□ 1.6
HOMER3-205ENST00000542541 GRIK3Q13003 919 aa25.02■■□□□ 1.6
HOMER3-205ENST00000542541 DUOXA2Q1HG44 320 aa25.02■■□□□ 1.6
HOMER3-205ENST00000542541 DCAF17Q5H9S7 520 aaPredicted RBP25.02■■□□□ 1.6
HOMER3-205ENST00000542541 JADE1Q6IE81 842 aa25.02■■□□□ 1.6
HOMER3-205ENST00000542541 UBQLN1Q9UMX0 589 aaKnown RBP25.02■■□□□ 1.6
HOMER3-205ENST00000542541 LRRIQ3A6PVS8 624 aaPredicted RBP25.01■■□□□ 1.59
HOMER3-205ENST00000542541 PTGESO14684 152 aa25.01■■□□□ 1.59
HOMER3-205ENST00000542541 GJB5O95377 273 aa25.01■■□□□ 1.59
HOMER3-205ENST00000542541 GTF2H1P32780 548 aa25.01■■□□□ 1.59
HOMER3-205ENST00000542541 WNT7BP56706 349 aa25.01■■□□□ 1.59
HOMER3-205ENST00000542541 TFAMQ00059 246 aaKnown RBP25.01■■□□□ 1.59
HOMER3-205ENST00000542541 GLRA4Q5JXX5 417 aa25.01■■□□□ 1.59
HOMER3-205ENST00000542541 FAM117BQ6P1L5 589 aa25.01■■□□□ 1.59
HOMER3-205ENST00000542541 HERC6Q8IVU3 1022 aa25.01■■□□□ 1.59
HOMER3-205ENST00000542541 PLEKHO2Q8TD55 490 aa25.01■■□□□ 1.59
HOMER3-205ENST00000542541 SLC35C1Q96A29 364 aa25.01■■□□□ 1.59
HOMER3-205ENST00000542541 ZMAT2Q96NC0 199 aaKnown RBP25.01■■□□□ 1.59
HOMER3-205ENST00000542541 CASD1Q96PB1 797 aa25.01■■□□□ 1.59
HOMER3-205ENST00000542541 POP1Q99575 1024 aaKnown RBP25.01■■□□□ 1.59
HOMER3-205ENST00000542541 TUBGCP2Q9BSJ2 902 aa25.01■■□□□ 1.59
HOMER3-205ENST00000542541 RBSNQ9H1K0 784 aa25.01■■□□□ 1.59
HOMER3-205ENST00000542541 INTS13Q9NVM9 706 aa25.01■■□□□ 1.59
HOMER3-205ENST00000542541 RANBP2P49792 3224 aaKnown RBP25.01■■□□□ 1.59
HOMER3-205ENST00000542541 TBKBP1A7MCY6 615 aa25.01■■□□□ 1.59
HOMER3-205ENST00000542541 POMCP01189 267 aa25.01■■□□□ 1.59
HOMER3-205ENST00000542541 NFICP08651 508 aa25.01■■□□□ 1.59
HOMER3-205ENST00000542541 TMEM191BP0C7N4 346 aa25.01■■□□□ 1.59
HOMER3-205ENST00000542541 DLG4P78352 724 aa25.01■■□□□ 1.59
HOMER3-205ENST00000542541 RNASELQ05823 741 aaKnown RBP25.01■■□□□ 1.59
HOMER3-205ENST00000542541 ZBTB6Q15916 424 aa25.01■■□□□ 1.59
HOMER3-205ENST00000542541 MAN2A1Q16706 1144 aa25.01■■□□□ 1.59
HOMER3-205ENST00000542541 BEST2Q8NFU1 509 aa25.01■■□□□ 1.59
HOMER3-205ENST00000542541 ANKRD36BP1Q96IX9 119 aa25.01■■□□□ 1.59
HOMER3-205ENST00000542541 YME1L1Q96TA2 773 aa25.01■■□□□ 1.59
HOMER3-205ENST00000542541 MIOSQ9NXC5 875 aa25.01■■□□□ 1.59
HOMER3-205ENST00000542541 LIMA1Q9UHB6 759 aaKnown RBP25.01■■□□□ 1.59
HOMER3-205ENST00000542541 LRRC10BA6NIK2 292 aa25■■□□□ 1.59
HOMER3-205ENST00000542541 TNNC2P02585 160 aa25■■□□□ 1.59
HOMER3-205ENST00000542541 TRIM49P0CI25 452 aa25■■□□□ 1.59
HOMER3-205ENST00000542541 TRIM49CP0CI26 452 aa25■■□□□ 1.59
HOMER3-205ENST00000542541 PRKCSHP14314 528 aaPredicted RBP25■■□□□ 1.59
HOMER3-205ENST00000542541 CYP3A5P20815 502 aa25■■□□□ 1.59
HOMER3-205ENST00000542541 ZNF689Q96CS4 500 aaPredicted RBP25■■□□□ 1.59
HOMER3-205ENST00000542541 FAM193BQ96PV7 902 aaPredicted RBP25■■□□□ 1.59
HOMER3-205ENST00000542541 PPP1R10Q96QC0 940 aaKnown RBP25■■□□□ 1.59
HOMER3-205ENST00000542541 CXCL16Q9H2A7 254 aa25■■□□□ 1.59
HOMER3-205ENST00000542541 INSL6Q9Y581 213 aa25■■□□□ 1.59
HOMER3-205ENST00000542541 AFF1P51825 1210 aaKnown RBP24.99■■□□□ 1.59
HOMER3-205ENST00000542541 KRT31Q15323 416 aa24.99■■□□□ 1.59
HOMER3-205ENST00000542541 TMCO2Q7Z6W1 182 aaPredicted RBP24.99■■□□□ 1.59
HOMER3-205ENST00000542541 EFCAB13Q8IY85 973 aa24.99■■□□□ 1.59
HOMER3-205ENST00000542541 LRRC43Q8N309 656 aa24.99■■□□□ 1.59
HOMER3-205ENST00000542541 RAD9AQ99638 391 aa24.99■■□□□ 1.59
HOMER3-205ENST00000542541 TBC1D13Q9NVG8 400 aa24.99■■□□□ 1.59
HOMER3-205ENST00000542541 N4BP1O75113 896 aaKnown RBP24.98■■□□□ 1.59
HOMER3-205ENST00000542541 ATP1A3P13637 1013 aa24.98■■□□□ 1.59
HOMER3-205ENST00000542541 GATMP50440 423 aa24.98■■□□□ 1.59
HOMER3-205ENST00000542541 KCNH2Q12809 1159 aa24.98■■□□□ 1.59
HOMER3-205ENST00000542541 C1orf220Q5T0J3 134 aa24.98■■□□□ 1.59
HOMER3-205ENST00000542541 CMTR2Q8IYT2 770 aaKnown RBP24.98■■□□□ 1.59
HOMER3-205ENST00000542541 PLAGL2Q9UPG8 496 aa24.98■■□□□ 1.59
HOMER3-205ENST00000542541 AFPP02771 609 aaKnown RBP24.97■■□□□ 1.59
HOMER3-205ENST00000542541 HTRA4P83105 476 aaPredicted RBP24.97■■□□□ 1.59
HOMER3-205ENST00000542541 BTG3Q14201 252 aaPredicted RBP24.97■■□□□ 1.59
HOMER3-205ENST00000542541 LMBRD2Q68DH5 695 aaPredicted RBP24.97■■□□□ 1.59
HOMER3-205ENST00000542541 ZNF516Q92618 1163 aa24.97■■□□□ 1.59
HOMER3-205ENST00000542541 TMEM8AQ9HCN3 771 aa24.97■■□□□ 1.59
HOMER3-205ENST00000542541 DPP3Q9NY33 737 aa24.97■■□□□ 1.59
HOMER3-205ENST00000542541 R3HCC1Q9Y3T6 440 aaKnown RBP24.97■■□□□ 1.59
HOMER3-205ENST00000542541 CITO14578 2027 aa24.97■■□□□ 1.59
HOMER3-205ENST00000542541 SERPINC1P01008 464 aa24.97■■□□□ 1.59
HOMER3-205ENST00000542541 GCLMP48507 274 aa24.97■■□□□ 1.59
HOMER3-205ENST00000542541 PPP3CAQ08209 521 aa24.97■■□□□ 1.59
HOMER3-205ENST00000542541 CETN1Q12798 172 aa24.97■■□□□ 1.59
HOMER3-205ENST00000542541 TUSC3Q13454 348 aa24.97■■□□□ 1.59
HOMER3-205ENST00000542541 VWA3BQ502W6 1294 aa24.97■■□□□ 1.59
HOMER3-205ENST00000542541 KRT39Q6A163 491 aa24.97■■□□□ 1.59
HOMER3-205ENST00000542541 OR5B17Q8NGF7 314 aa24.97■■□□□ 1.59
HOMER3-205ENST00000542541 MTMR12Q9C0I1 747 aa24.97■■□□□ 1.59
HOMER3-205ENST00000542541 NDST4Q9H3R1 872 aa24.97■■□□□ 1.59
HOMER3-205ENST00000542541 MMRN2Q9H8L6 949 aa24.97■■□□□ 1.59
HOMER3-205ENST00000542541 RC3H2Q9HBD1 1191 aaKnown RBP24.97■■□□□ 1.59
HOMER3-205ENST00000542541 TAB2Q9NYJ8 693 aa24.97■■□□□ 1.59
HOMER3-205ENST00000542541 PTPRJQ12913 1337 aa24.96■■□□□ 1.59
HOMER3-205ENST00000542541 TLL1O43897 1013 aa24.96■■□□□ 1.59
HOMER3-205ENST00000542541 PHACTR2O75167 634 aa24.96■■□□□ 1.59
HOMER3-205ENST00000542541 MXI1P50539 228 aa24.96■■□□□ 1.59
HOMER3-205ENST00000542541 BIRC3Q13489 604 aa24.96■■□□□ 1.59
HOMER3-205ENST00000542541 NAB2Q15742 525 aa24.96■■□□□ 1.59
HOMER3-205ENST00000542541 FILIP1LQ4L180 1135 aa24.96■■□□□ 1.59
HOMER3-205ENST00000542541 PAN2Q504Q3 1202 aaKnown RBP24.96■■□□□ 1.59
HOMER3-205ENST00000542541 SV2AQ7L0J3 742 aa24.96■■□□□ 1.59
HOMER3-205ENST00000542541 TRAPPC11Q7Z392 1133 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms