RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 HELQQ8TDG4 1101 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 ATXN2LQ8WWM7 1075 aaKnown RBP5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 PSPC1Q8WXF1 523 aaKnown RBP5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 DDX1Q92499 740 aaKnown RBP5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 P3H4Q92791 437 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 KAT5Q92993 513 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 ART4Q93070 314 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 CNKSR1Q969H4 720 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 HVCN1Q96D96 273 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 SEC16BQ96JE7 1060 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 FBXL18Q96ME1 805 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 ZNF317Q96PQ6 595 aaPredicted RBP5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 XPO6Q96QU8 1125 aaKnown RBP5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 IWS1Q96ST2 819 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 SLC4A5Q9BY07 1137 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 OSBPL7Q9BZF2 842 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 TRIM31Q9BZY9 425 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 PCIF1Q9H4Z3 704 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 LRRC19Q9H756 370 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 ACTR5Q9H9F9 607 aaPredicted RBP5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 SEPT11Q9NVA2 429 aaKnown RBP5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 FBXO28Q9NVF7 368 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 MAP3K20Q9NYL2 800 aaKnown RBP5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 TMOD2Q9NZR1 351 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 CTTNBP2NLQ9P2B4 639 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 UVRAGQ9P2Y5 699 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 ZNF70Q9UC06 446 aaPredicted RBP5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 GTF3C4Q9UKN8 822 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 ASTN2O75129 1339 aaPredicted RBP5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 TCRBV7S2A1N4TA0A589 114 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 TCP10L2B9ZVM9 353 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 FSCN2O14926 492 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 TP73O15350 636 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 AGTP01019 485 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 RARAP10276 462 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 GHRP10912 638 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 RARGP13631 454 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 CYP11B1P15538 503 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 ADSSP30520 456 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 GTF2H1P32780 548 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 COILP38432 576 aaPredicted RBP5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 USP8P40818 1118 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 PLTPP55058 493 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 MFAP3P55082 362 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 MRPS9P82933 396 aaKnown RBP5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 CDR2Q01850 454 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 ADCY2Q08462 1091 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 IFFO1Q0D2I5 559 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 SLC29A2Q14542 456 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 MESDQ14696 234 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 SLMAPQ14BN4 828 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 ODF2Q5BJF6 829 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 C6orf118Q5T5N4 469 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 SEL1L2Q5TEA6 688 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 DENND2CQ68D51 928 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 MFSD5Q6N075 450 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 RHBDF2Q6PJF5 856 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 CCDC137Q6PK04 289 aaKnown RBP5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 ADAT2Q7Z6V5 191 aaKnown RBP5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 PIGWQ7Z7B1 504 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 MCF2L2Q86YR7 1114 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 MAP4K3Q8IVH8 894 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 CCDC13Q8IYE1 715 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 PARD3BQ8TEW8 1205 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 SEMA4DQ92854 862 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 CLP1Q92989 425 aaKnown RBP5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 CHMP6Q96FZ7 201 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 CABS1Q96KC9 395 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 MFSD14AQ96MC6 490 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 AGBL1Q96MI9 1066 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 NTPCRQ9BSD7 190 aaKnown RBP5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 SEMA4AQ9H3S1 761 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 A1CFQ9NQ94 594 aaKnown RBP5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 ANKEF1Q9NU02 776 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 TBC1D22BQ9NU19 505 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 KIAA1522Q9P206 1035 aaPredicted RBP5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 BCCIPQ9P287 314 aaKnown RBP eCLIP5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 PNMA2Q9UL42 364 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 ZNFX1Q9P2E3 1918 aaKnown RBP5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 CLRN2A0PK11 232 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 ANKRD63C9JTQ0 380 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 DDX39AO00148 427 aaKnown RBP5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 DNM1LO00429 736 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 NFIBO00712 420 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 BACH1O14867 736 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 ASAP2O43150 1006 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 CYP26A1O43174 497 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 RIPK2O43353 540 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 RGS20O76081 388 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 MMEP08473 750 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 YWHABP31946 246 aaKnown RBP5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 CDR1P51861 262 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 RWDD2BP57060 319 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 TGFB2P61812 414 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 TNIP1Q15025 636 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 SNRNP35Q16560 246 aaKnown RBP5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 UGCGQ16739 394 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 SPRED3Q2MJR0 410 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 Q3C1V9 767 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 ANKRD20A8PQ5CZ79 823 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms