RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 HIC1Q14526 733 aa18.55■□□□□ 0.56
TMEM50B-210ENST00000542230 GRIK4Q16099 956 aa18.55■□□□□ 0.56
TMEM50B-210ENST00000542230 C2CD6Q53TS8 623 aa18.55■□□□□ 0.56
TMEM50B-210ENST00000542230 RGMBQ6NW40 437 aa18.55■□□□□ 0.56
TMEM50B-210ENST00000542230 MTERF4Q7Z6M4 381 aaKnown RBP18.55■□□□□ 0.56
TMEM50B-210ENST00000542230 DAAM2Q86T65 1068 aa18.55■□□□□ 0.56
TMEM50B-210ENST00000542230 CPNE8Q86YQ8 564 aa18.55■□□□□ 0.56
TMEM50B-210ENST00000542230 EFCAB13Q8IY85 973 aa18.55■□□□□ 0.56
TMEM50B-210ENST00000542230 SPATA4Q8NEY3 305 aa18.55■□□□□ 0.56
TMEM50B-210ENST00000542230 CTNNBL1Q8WYA6 563 aaPredicted RBP18.55■□□□□ 0.56
TMEM50B-210ENST00000542230 MAP7D2Q96T17 732 aa18.55■□□□□ 0.56
TMEM50B-210ENST00000542230 PLEKHA4Q9H4M7 779 aa18.55■□□□□ 0.56
TMEM50B-210ENST00000542230 DAAM1Q9Y4D1 1078 aa18.55■□□□□ 0.56
TMEM50B-210ENST00000542230 KIAA0391O15091 583 aaKnown RBP18.55■□□□□ 0.56
TMEM50B-210ENST00000542230 ACO1P21399 889 aaKnown RBP18.55■□□□□ 0.56
TMEM50B-210ENST00000542230 NCOA4Q13772 614 aa18.55■□□□□ 0.56
TMEM50B-210ENST00000542230 CC2D1AQ6P1N0 951 aaPredicted RBP18.55■□□□□ 0.56
TMEM50B-210ENST00000542230 MPZL3Q6UWV2 235 aa18.55■□□□□ 0.56
TMEM50B-210ENST00000542230 C17orf99Q6UX52 265 aa18.55■□□□□ 0.56
TMEM50B-210ENST00000542230 IFNL1Q8IU54 200 aa18.55■□□□□ 0.56
TMEM50B-210ENST00000542230 JPH2Q9BR39 696 aaPredicted RBP18.55■□□□□ 0.56
TMEM50B-210ENST00000542230 ISCUQ9H1K1 167 aa18.55■□□□□ 0.56
TMEM50B-210ENST00000542230 C2orf40Q9H1Z8 148 aa18.55■□□□□ 0.56
TMEM50B-210ENST00000542230 CDT1Q9H211 546 aa18.55■□□□□ 0.56
TMEM50B-210ENST00000542230 RBM12Q9NTZ6 932 aaKnown RBP18.55■□□□□ 0.56
TMEM50B-210ENST00000542230 INTUQ9ULD6 942 aa18.55■□□□□ 0.56
TMEM50B-210ENST00000542230 ANKRD62A6NC57 917 aa18.54■□□□□ 0.56
TMEM50B-210ENST00000542230 KCNK3O14649 394 aa18.54■□□□□ 0.56
TMEM50B-210ENST00000542230 PHACTR2O75167 634 aa18.54■□□□□ 0.56
TMEM50B-210ENST00000542230 CXCL8P10145 99 aa18.54■□□□□ 0.56
TMEM50B-210ENST00000542230 SCP2P22307 547 aa18.54■□□□□ 0.56
TMEM50B-210ENST00000542230 TFDP1Q14186 410 aa18.54■□□□□ 0.56
TMEM50B-210ENST00000542230 WDR44Q5JSH3 913 aa18.54■□□□□ 0.56
TMEM50B-210ENST00000542230 PHLDB2Q86SQ0 1253 aa18.54■□□□□ 0.56
TMEM50B-210ENST00000542230 RFFLQ8WZ73 363 aa18.54■□□□□ 0.56
TMEM50B-210ENST00000542230 GINS2Q9Y248 185 aa18.54■□□□□ 0.56
TMEM50B-210ENST00000542230 NCANO14594 1321 aa18.54■□□□□ 0.56
TMEM50B-210ENST00000542230 KAT6AQ92794 2004 aa18.54■□□□□ 0.56
TMEM50B-210ENST00000542230 SASH3O75995 380 aa18.54■□□□□ 0.56
TMEM50B-210ENST00000542230 ZRANB2O95218 330 aaKnown RBP eCLIP18.54■□□□□ 0.56
TMEM50B-210ENST00000542230 KIF4AO95239 1232 aa18.54■□□□□ 0.56
TMEM50B-210ENST00000542230 HOXC6P09630 235 aa18.54■□□□□ 0.56
TMEM50B-210ENST00000542230 ZNF865P0CJ78 1059 aaPredicted RBP18.54■□□□□ 0.56
TMEM50B-210ENST00000542230 MYL6P60660 151 aa18.54■□□□□ 0.56
TMEM50B-210ENST00000542230 NOP14P78316 857 aaKnown RBP18.54■□□□□ 0.56
TMEM50B-210ENST00000542230 TFAMQ00059 246 aaKnown RBP18.54■□□□□ 0.56
TMEM50B-210ENST00000542230 CKAP4Q07065 602 aaKnown RBP18.54■□□□□ 0.56
TMEM50B-210ENST00000542230 IQSEC1Q6DN90 963 aa18.54■□□□□ 0.56
TMEM50B-210ENST00000542230 LLGL2Q6P1M3 1020 aa18.54■□□□□ 0.56
TMEM50B-210ENST00000542230 SLFN11Q7Z7L1 901 aa18.54■□□□□ 0.56
TMEM50B-210ENST00000542230 EXOC8Q8IYI6 725 aa18.54■□□□□ 0.56
TMEM50B-210ENST00000542230 KIAA0319LQ8IZA0 1049 aa18.54■□□□□ 0.56
TMEM50B-210ENST00000542230 BTBD6Q96KE9 485 aa18.54■□□□□ 0.56
TMEM50B-210ENST00000542230 TRPM7Q96QT4 1865 aa18.53■□□□□ 0.56
TMEM50B-210ENST00000542230 A0A0A6YYK5 440 aaPredicted RBP18.53■□□□□ 0.56
TMEM50B-210ENST00000542230 BEX3Q00994 111 aa18.53■□□□□ 0.56
TMEM50B-210ENST00000542230 CDR2Q01850 454 aa18.53■□□□□ 0.56
TMEM50B-210ENST00000542230 ENPEPQ07075 957 aa18.53■□□□□ 0.56
TMEM50B-210ENST00000542230 CUL2Q13617 745 aa18.53■□□□□ 0.56
TMEM50B-210ENST00000542230 RPS6KA1Q15418 735 aa18.53■□□□□ 0.56
TMEM50B-210ENST00000542230 DGKDQ16760 1214 aa18.53■□□□□ 0.56
TMEM50B-210ENST00000542230 NT5DC3Q86UY8 548 aa18.53■□□□□ 0.56
TMEM50B-210ENST00000542230 KAT2BQ92831 832 aa18.53■□□□□ 0.56
TMEM50B-210ENST00000542230 LRRC1Q9BTT6 524 aa18.53■□□□□ 0.56
TMEM50B-210ENST00000542230 CCDC94Q9BW85 323 aaPredicted RBP18.53■□□□□ 0.56
TMEM50B-210ENST00000542230 FAM49AQ9H0Q0 323 aaPredicted RBP18.53■□□□□ 0.56
TMEM50B-210ENST00000542230 CDHR5Q9HBB8 845 aa18.53■□□□□ 0.56
TMEM50B-210ENST00000542230 GNEQ9Y223 722 aaKnown RBP18.53■□□□□ 0.56
TMEM50B-210ENST00000542230 STXBP5LQ9Y2K9 1186 aa18.53■□□□□ 0.56
TMEM50B-210ENST00000542230 MANSC4A6NHS7 340 aaPredicted RBP18.53■□□□□ 0.56
TMEM50B-210ENST00000542230 HOXD8P13378 290 aaPredicted RBP18.53■□□□□ 0.56
TMEM50B-210ENST00000542230 PDE6CP51160 858 aa18.53■□□□□ 0.56
TMEM50B-210ENST00000542230 SLC7A5Q01650 507 aa18.53■□□□□ 0.56
TMEM50B-210ENST00000542230 CRHR2Q13324 411 aa18.53■□□□□ 0.56
TMEM50B-210ENST00000542230 KIZQ2M2Z5 673 aa18.53■□□□□ 0.56
TMEM50B-210ENST00000542230 CCDC181Q5TID7 509 aa18.53■□□□□ 0.56
TMEM50B-210ENST00000542230 TMEM270Q6UE05 265 aa18.53■□□□□ 0.56
TMEM50B-210ENST00000542230 TMCO3Q6UWJ1 677 aa18.53■□□□□ 0.56
TMEM50B-210ENST00000542230 PEX26Q7Z412 305 aa18.53■□□□□ 0.56
TMEM50B-210ENST00000542230 LMBR1Q8WVP7 490 aa18.53■□□□□ 0.56
TMEM50B-210ENST00000542230 NLRP7Q8WX94 980 aa18.53■□□□□ 0.56
TMEM50B-210ENST00000542230 RAB21Q9UL25 225 aa18.53■□□□□ 0.56
TMEM50B-210ENST00000542230 FAM155AB1AL88 458 aaPredicted RBP18.52■□□□□ 0.56
TMEM50B-210ENST00000542230 ARF4P18085 180 aaPredicted RBP18.52■□□□□ 0.56
TMEM50B-210ENST00000542230 FMNL3Q8IVF7 1028 aa18.52■□□□□ 0.56
TMEM50B-210ENST00000542230 USP6NLQ92738 828 aa18.52■□□□□ 0.56
TMEM50B-210ENST00000542230 CXCL16Q9H2A7 254 aa18.52■□□□□ 0.56
TMEM50B-210ENST00000542230 ABCB6Q9NP58 842 aa18.52■□□□□ 0.56
TMEM50B-210ENST00000542230 GJD2Q9UKL4 321 aa18.52■□□□□ 0.56
TMEM50B-210ENST00000542230 ASAP2O43150 1006 aa18.52■□□□□ 0.55
TMEM50B-210ENST00000542230 ZC3H11AO75152 810 aaKnown RBP eCLIP18.52■□□□□ 0.55
TMEM50B-210ENST00000542230 RTN2O75298 545 aa18.52■□□□□ 0.55
TMEM50B-210ENST00000542230 CLTAP09496 248 aa18.52■□□□□ 0.55
TMEM50B-210ENST00000542230 PHKA2P46019 1235 aa18.52■□□□□ 0.55
TMEM50B-210ENST00000542230 CBX1P83916 185 aa18.52■□□□□ 0.55
TMEM50B-210ENST00000542230 PASD1Q8IV76 773 aa18.52■□□□□ 0.55
TMEM50B-210ENST00000542230 GSPT2Q8IYD1 628 aaKnown RBP18.52■□□□□ 0.55
TMEM50B-210ENST00000542230 CPA5Q8WXQ8 436 aa18.52■□□□□ 0.55
TMEM50B-210ENST00000542230 VTI1AQ96AJ9 217 aa18.52■□□□□ 0.55
TMEM50B-210ENST00000542230 ARHGAP39Q9C0H5 1083 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms