RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 EPB42P16452 691 aa11.29□□□□□ -0.6
GABRB3-204ENST00000541819 SLC1A1P43005 524 aa11.29□□□□□ -0.6
GABRB3-204ENST00000541819 RESTQ13127 1097 aa11.29□□□□□ -0.6
GABRB3-204ENST00000541819 NCAPHQ15003 741 aa11.29□□□□□ -0.6
GABRB3-204ENST00000541819 MFSD4BQ5TF39 518 aa11.29□□□□□ -0.6
GABRB3-204ENST00000541819 PTRHD1Q6GMV3 140 aaKnown RBP11.29□□□□□ -0.6
GABRB3-204ENST00000541819 SYNE4Q8N205 404 aa11.29□□□□□ -0.6
GABRB3-204ENST00000541819 KRT35Q92764 455 aa11.29□□□□□ -0.6
GABRB3-204ENST00000541819 SEPT5Q99719 369 aaPredicted RBP11.29□□□□□ -0.6
GABRB3-204ENST00000541819 TSEN34Q9BSV6 310 aaKnown RBP11.29□□□□□ -0.6
GABRB3-204ENST00000541819 MRPL1Q9BYD6 325 aaKnown RBP11.29□□□□□ -0.6
GABRB3-204ENST00000541819 GMNCA6NCL1 334 aa11.29□□□□□ -0.6
GABRB3-204ENST00000541819 POTECB2RU33 542 aa11.29□□□□□ -0.6
GABRB3-204ENST00000541819 LZTS3O60299 673 aaPredicted RBP11.29□□□□□ -0.6
GABRB3-204ENST00000541819 CLASP2O75122 1294 aaKnown RBP11.29□□□□□ -0.6
GABRB3-204ENST00000541819 SFSWAPQ12872 951 aaKnown RBP11.29□□□□□ -0.6
GABRB3-204ENST00000541819 FAM182BQ5T319 152 aa11.29□□□□□ -0.6
GABRB3-204ENST00000541819 C16orf89Q6UX73 402 aa11.29□□□□□ -0.6
GABRB3-204ENST00000541819 LUZP2Q86TE4 346 aa11.29□□□□□ -0.6
GABRB3-204ENST00000541819 UNC5CLQ8IV45 518 aa11.29□□□□□ -0.6
GABRB3-204ENST00000541819 SEPT12Q8IYM1 358 aa11.29□□□□□ -0.6
GABRB3-204ENST00000541819 ARMC2Q8NEN0 867 aa11.29□□□□□ -0.6
GABRB3-204ENST00000541819 PTPRN2Q92932 1015 aa11.29□□□□□ -0.6
GABRB3-204ENST00000541819 HPS4Q9NQG7 708 aa11.29□□□□□ -0.6
GABRB3-204ENST00000541819 PALLDQ8WX93 1383 aa11.29□□□□□ -0.6
GABRB3-204ENST00000541819 AKAP10O43572 662 aa11.29□□□□□ -0.6
GABRB3-204ENST00000541819 H2AFYO75367 372 aaKnown RBP11.29□□□□□ -0.6
GABRB3-204ENST00000541819 MRPS25P82663 173 aaKnown RBP11.29□□□□□ -0.6
GABRB3-204ENST00000541819 CYTH1Q15438 398 aa11.29□□□□□ -0.6
GABRB3-204ENST00000541819 TRIM71Q2Q1W2 868 aaKnown RBP11.29□□□□□ -0.6
GABRB3-204ENST00000541819 C16orf62Q7Z3J2 963 aa11.29□□□□□ -0.6
GABRB3-204ENST00000541819 PRUNE1Q86TP1 453 aa11.29□□□□□ -0.6
GABRB3-204ENST00000541819 C10orf53Q8N6V4 93 aa11.29□□□□□ -0.6
GABRB3-204ENST00000541819 ASCC2Q9H1I8 757 aaPredicted RBP11.29□□□□□ -0.6
GABRB3-204ENST00000541819 UTYO14607 1347 aa11.29□□□□□ -0.6
GABRB3-204ENST00000541819 SESN2P58004 480 aaPredicted RBP11.28□□□□□ -0.6
GABRB3-204ENST00000541819 DHX34Q14147 1143 aaKnown RBP11.28□□□□□ -0.6
GABRB3-204ENST00000541819 TRIP4Q15650 581 aaPredicted RBP11.28□□□□□ -0.6
GABRB3-204ENST00000541819 P3H1Q32P28 736 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 USP17L6PQ6QN14 398 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 PPP1R14AQ96A00 147 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 RSPH10B2B2RC85 870 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 EEF2KO00418 725 aaKnown RBP11.28□□□□□ -0.6
GABRB3-204ENST00000541819 RSPH10BP0C881 870 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 GUCA1AP43080 201 aaPredicted RBP11.28□□□□□ -0.6
GABRB3-204ENST00000541819 KRT17Q04695 432 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 ZNF746Q6NUN9 644 aaPredicted RBP11.28□□□□□ -0.6
GABRB3-204ENST00000541819 SYDE1Q6ZW31 735 aaPredicted RBP11.28□□□□□ -0.6
GABRB3-204ENST00000541819 CYFIP1Q7L576 1253 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 DCP1BQ8IZD4 617 aaKnown RBP11.28□□□□□ -0.6
GABRB3-204ENST00000541819 SHCBP1Q8NEM2 672 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 USP6NLQ92738 828 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 TMEM47Q9BQJ4 181 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 OSBPL1AQ9BXW6 950 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 YIPF3Q9GZM5 350 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 SPACA6W5XKT8 324 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 HEG1Q9ULI3 1381 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 TRIM49BA6NDI0 452 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 CFAP73A6NFT4 308 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 NBNO60934 754 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 RAD23BP54727 409 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 SUSD4Q5VX71 490 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 ERAP2Q6P179 960 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 PRPF18Q99633 342 aaKnown RBP11.28□□□□□ -0.6
GABRB3-204ENST00000541819 MRPS26Q9BYN8 205 aaKnown RBP11.28□□□□□ -0.6
GABRB3-204ENST00000541819 RAD18Q9NS91 495 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 STK36Q9NRP7 1315 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 A0A087WWV3 80 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 DARSP14868 501 aaKnown RBP11.28□□□□□ -0.6
GABRB3-204ENST00000541819 MZF1P28698 734 aaPredicted RBP11.28□□□□□ -0.6
GABRB3-204ENST00000541819 SPP2Q13103 211 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 MAPRE1Q15691 268 aaKnown RBP11.28□□□□□ -0.6
GABRB3-204ENST00000541819 HAUS6Q7Z4H7 955 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 C11orf96Q7Z7L8 435 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 RCOR2Q8IZ40 523 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 VPS37AQ8NEZ2 397 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 CALML6Q8TD86 181 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 USP33Q8TEY7 942 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 ZNF512Q96ME7 567 aaPredicted RBP11.28□□□□□ -0.6
GABRB3-204ENST00000541819 AGBL1Q96MI9 1066 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 TRIM8Q9BZR9 551 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 ETNK1Q9HBU6 452 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 DEFA1P59665 94 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 DEFA3P59666 94 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 RBP5P82980 135 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 STAT4Q14765 748 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 LVRNQ6Q4G3 990 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 ZNF579Q8NAF0 562 aaKnown RBP11.28□□□□□ -0.6
GABRB3-204ENST00000541819 TMA16Q96EY4 203 aaKnown RBP11.28□□□□□ -0.6
GABRB3-204ENST00000541819 TIPINQ9BVW5 301 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 RPAP3Q9H6T3 665 aaPredicted RBP11.28□□□□□ -0.6
GABRB3-204ENST00000541819 CATSPERBQ9H7T0 1116 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 SCN3BQ9NY72 215 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 CDYLQ9Y232 598 aa11.28□□□□□ -0.6
GABRB3-204ENST00000541819 FOXP2O15409 715 aa11.27□□□□□ -0.6
GABRB3-204ENST00000541819 SSTR3P32745 418 aaPredicted RBP11.27□□□□□ -0.6
GABRB3-204ENST00000541819 USP10Q14694 798 aaKnown RBP11.27□□□□□ -0.6
GABRB3-204ENST00000541819 CNGA3Q16281 694 aa11.27□□□□□ -0.6
GABRB3-204ENST00000541819 HS6ST3Q8IZP7 471 aa11.27□□□□□ -0.6
GABRB3-204ENST00000541819 RNF149Q8NC42 400 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms