RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 DENND3A2RUS2 1198 aa15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 APOL1O14791 398 aa15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 P4HA2O15460 535 aa15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 TARSP26639 723 aaKnown RBP15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 IFNA8P32881 189 aa15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 WLSQ5T9L3 541 aa15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 PRPF39Q86UA1 669 aaKnown RBP15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 ARHGEF26Q96DR7 871 aa15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 ZNF512BQ96KM6 892 aaPredicted RBP15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 FAM167AQ96KS9 214 aa15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 KCND2Q9NZV8 630 aa15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 WDR35Q9P2L0 1181 aa15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 AURKCQ9UQB9 309 aa15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 ERCC6L2Q5T890 1561 aa15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 SETBP1Q9Y6X0 1596 aa15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 ANGPT2O15123 496 aa15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 CYP26A1O43174 497 aa15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 TTC39BQ5VTQ0 682 aaPredicted RBP15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 C4orf50Q6ZRC1 276 aa15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 E2F7Q96AV8 911 aa15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 SENP7Q9BQF6 1050 aa15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 PCSK1NQ9UHG2 260 aa15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 PPEF1O14829 653 aaPredicted RBP15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 RPS6KA5O75582 802 aa15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 QARSP47897 775 aaKnown RBP15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 PTPAQ15257 358 aa15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 C4orf22Q6V702 233 aa15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 NLRP9Q7RTR0 991 aa15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 PCYOX1LQ8NBM8 494 aa15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 FSD1LQ9BXM9 530 aa15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 CLEC11AQ9Y240 323 aa15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 ALG6Q9Y672 507 aa15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 CRB1P82279 1406 aa15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 RSPH10B2B2RC85 870 aa15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 RSPH10BP0C881 870 aa15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 SERPINB1P30740 379 aa15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 S100A5P33763 92 aa15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 GEMIN4P57678 1058 aaKnown RBP15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 MDH1BQ5I0G3 518 aa15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 EIF2AK1Q9BQI3 630 aaKnown RBP15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 ZC3H7BQ9UGR2 993 aaKnown RBP15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 STAP1Q9ULZ2 295 aa15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 C15orf41Q9Y2V0 281 aa15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 NMT2O60551 498 aa15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 COMTP21964 271 aa15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 COPAP53621 1224 aa15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 HSPA2P54652 639 aa15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 TRIM65Q6PJ69 517 aa15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 NEDD1Q8NHV4 660 aa15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 TEX12Q9BXU0 123 aa15.75■□□□□ 0.11
SMARCA4-207ENST00000541122 TMEM247A6NEH6 219 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 MAP2K7O14733 419 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 TBX3O15119 743 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 AKAP10O43572 662 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 FKBP6O75344 327 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 SRP72O76094 671 aaKnown RBP15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 FOXO4P98177 505 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 EPHA7Q15375 998 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 KLHDC7AQ5VTJ3 777 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 MFN1Q8IWA4 741 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 HPS3Q969F9 1004 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 DDX20Q9UHI6 824 aaKnown RBP15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 GGA2Q9UJY4 613 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 GRID1Q9ULK0 1009 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 ATP11BQ9Y2G3 1177 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 ABL1P00519 1130 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 CALB2P22676 271 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 ANTXR2P58335 489 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 ACTR2P61160 394 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 DAB2P98082 770 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 PAGR1Q9BTK6 254 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 WHRNQ9P202 907 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 MYMKA6NI61 221 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 USP17L15C9J2P7 530 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 USP17L13C9JLJ4 530 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 USP17L11C9JVI0 530 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 USP17L18D6R9N7 530 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 USP17L22D6RA61 530 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 USP17L17D6RBQ6 530 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 USP17L19D6RCP7 530 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 USP17L20D6RJB6 530 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 TMCC1O94876 653 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 CDH6P55285 790 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 USP17L24Q0WX57 530 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 DNAJC3Q13217 504 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 MTMR1Q13613 665 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 PIGHQ14442 188 aaPredicted RBP15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 USP17L6PQ6QN14 398 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 FRA10AC1Q70Z53 315 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 PLD3Q8IV08 490 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 OLFML3Q9NRN5 406 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 QRICH2Q9H0J4 1663 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 SPDYE2BA6NHP3 402 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 TBC1D4O60343 1298 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 SPDYE6P0CI01 402 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 SRGAP2CP0DJJ0 459 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 PDHBP11177 359 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 ENO3P13929 434 aaPredicted RBP15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 POU5F1BQ06416 359 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 UGP2Q16851 508 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms