RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 P4HBP07237 508 aaKnown RBP9.15□□□□□ -0.94
CHD4-208ENST00000540960 TDGF1P13385 188 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 PLA2G2AP14555 144 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 IDEP14735 1019 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 CD72P21854 359 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 PBX3P40426 434 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 PRCPP42785 496 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 DNM2P50570 870 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 LIMK1P53667 647 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 TERF1P54274 439 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 SNRPFP62306 86 aaKnown RBP9.15□□□□□ -0.94
CHD4-208ENST00000540960 RPS6P62753 249 aaKnown RBP9.15□□□□□ -0.94
CHD4-208ENST00000540960 FKBP3Q00688 224 aaKnown RBP9.15□□□□□ -0.94
CHD4-208ENST00000540960 MTMR1Q13613 665 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 KCNJ12Q14500 433 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 MCM6Q14566 821 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 NR1I3Q14994 352 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 AASDHQ4L235 1098 aaPredicted RBP9.15□□□□□ -0.94
CHD4-208ENST00000540960 TCP11X2Q5H9J9 407 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 FAM26FQ5R3K3 315 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 FAM102BQ5T8I3 360 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 STPG1Q5TH74 334 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 CENPPQ6IPU0 288 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 RUFY4Q6ZNE9 571 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 OTUD6AQ7L8S5 288 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 TMC7Q7Z402 723 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 TMC6Q7Z403 805 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 FILIP1Q7Z7B0 1213 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 GPBP1Q86WP2 473 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 LRRC8AQ8IWT6 810 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 SMAP1Q8IYB5 467 aaPredicted RBP9.15□□□□□ -0.94
CHD4-208ENST00000540960 MRPL43Q8N983 215 aaKnown RBP9.15□□□□□ -0.94
CHD4-208ENST00000540960 PPTC7Q8NI37 304 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 CEP63Q96MT8 703 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 CCDC43Q96MW1 224 aaKnown RBP9.15□□□□□ -0.94
CHD4-208ENST00000540960 MTRQ99707 1265 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 HSD17B14Q9BPX1 270 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 EIF2AK1Q9BQI3 630 aaKnown RBP9.15□□□□□ -0.94
CHD4-208ENST00000540960 BCO2Q9BYV7 579 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 CWH43Q9H720 699 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 KCND1Q9NSA2 647 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 CGNQ9P2M7 1197 aaKnown RBP9.15□□□□□ -0.94
CHD4-208ENST00000540960 VAV3Q9UKW4 847 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 RAB23Q9ULC3 237 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 ODF2LQ9ULJ1 636 aa9.15□□□□□ -0.94
CHD4-208ENST00000540960 SHROOM3Q8TF72 1996 aa9.15□□□□□ -0.95
CHD4-208ENST00000540960 CELSR3Q9NYQ7 3312 aa9.15□□□□□ -0.95
CHD4-208ENST00000540960 KAT6AQ92794 2004 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 ARHGEF35A5YM69 484 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 MYMKA6NI61 221 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 FAM170BA6NMN3 283 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 TBKBP1A7MCY6 615 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 WDR64B1ANS9 1081 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 H0YCG3 227 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 AP5Z1O43299 807 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 CALUO43852 315 aaPredicted RBP9.14□□□□□ -0.95
CHD4-208ENST00000540960 EDIL3O43854 480 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 CAPNS1P04632 268 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 MAPTP10636 758 aaKnown RBP9.14□□□□□ -0.95
CHD4-208ENST00000540960 SKILP12757 684 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 CD52P31358 61 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 SPIRE1Q08AE8 756 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 MGAT3Q09327 533 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 C19orf57Q0VDD7 668 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 SRSF5Q13243 272 aaKnown RBP9.14□□□□□ -0.95
CHD4-208ENST00000540960 NOLC1Q14978 699 aaKnown RBP eCLIP9.14□□□□□ -0.95
CHD4-208ENST00000540960 EDRF1Q3B7T1 1238 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 HSDL1Q3SXM5 330 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 FBXO47Q5MNV8 452 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 ZNF746Q6NUN9 644 aaPredicted RBP9.14□□□□□ -0.95
CHD4-208ENST00000540960 CCDC149Q6ZUS6 474 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 MIER3Q7Z3K6 550 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 GPR149Q86SP6 731 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 VSIG10LQ86VR7 867 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 CATSPER3Q86XQ3 398 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 FMNL3Q8IVF7 1028 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 EXOC8Q8IYI6 725 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 TXLNBQ8N3L3 684 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 CELF5Q8N6W0 485 aaKnown RBP9.14□□□□□ -0.95
CHD4-208ENST00000540960 ZNF397Q8NF99 534 aaPredicted RBP9.14□□□□□ -0.95
CHD4-208ENST00000540960 KIAA1524Q8TCG1 905 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 STAMQ92783 540 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 EMID1Q96A84 441 aaPredicted RBP9.14□□□□□ -0.95
CHD4-208ENST00000540960 PANX2Q96RD6 677 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 PLIN2Q99541 437 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 GPR20Q99678 358 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 SENP7Q9BQF6 1050 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 PDCD2LQ9BRP1 358 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 RPP25Q9BUL9 199 aaKnown RBP9.14□□□□□ -0.95
CHD4-208ENST00000540960 NGRNQ9NPE2 291 aaKnown RBP9.14□□□□□ -0.95
CHD4-208ENST00000540960 RTN4Q9NQC3 1192 aaKnown RBP9.14□□□□□ -0.95
CHD4-208ENST00000540960 PRMT8Q9NR22 394 aaPredicted RBP9.14□□□□□ -0.95
CHD4-208ENST00000540960 PXMP2Q9NR77 195 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 KCNH7Q9NS40 1196 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 ANKEF1Q9NU02 776 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 SPTLC3Q9NUV7 552 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 LZTS1Q9Y250 596 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 PPME1Q9Y570 386 aa9.14□□□□□ -0.95
CHD4-208ENST00000540960 BAZ2BQ9UIF8 2168 aaKnown RBP9.14□□□□□ -0.95
CHD4-208ENST00000540960 NFASCO94856 1347 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms