RNA–Protein interactions for RNA: ENST00000540925.5

USP28-209, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 4

Gene USP28, Length 561 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-209ENST00000540925 HVCN1Q96D96 273 aa15.51■□□□□ 0.07
USP28-209ENST00000540925 TNMDQ9H2S6 317 aa15.51■□□□□ 0.07
USP28-209ENST00000540925 CUEDC2Q9H467 287 aa15.51■□□□□ 0.07
USP28-209ENST00000540925 GOLGA2P5Q9HBQ8 144 aa15.51■□□□□ 0.07
USP28-209ENST00000540925 DZANK1Q9NVP4 752 aa15.51■□□□□ 0.07
USP28-209ENST00000540925 PLXNA3P51805 1871 aa15.5■□□□□ 0.07
USP28-209ENST00000540925 LOC730098B7Z3J9 87 aa15.5■□□□□ 0.07
USP28-209ENST00000540925 ANKRD63C9JTQ0 380 aa15.5■□□□□ 0.07
USP28-209ENST00000540925 C2CD2LO14523 706 aa15.5■□□□□ 0.07
USP28-209ENST00000540925 OGTO15294 1046 aa15.5■□□□□ 0.07
USP28-209ENST00000540925 TADA2AO75478 443 aa15.5■□□□□ 0.07
USP28-209ENST00000540925 CLTAP09496 248 aa15.5■□□□□ 0.07
USP28-209ENST00000540925 CXCL8P10145 99 aa15.5■□□□□ 0.07
USP28-209ENST00000540925 HARSP12081 509 aaKnown RBP15.5■□□□□ 0.07
USP28-209ENST00000540925 TNFSF9P41273 254 aa15.5■□□□□ 0.07
USP28-209ENST00000540925 LIG4P49917 911 aa15.5■□□□□ 0.07
USP28-209ENST00000540925 CASP5P51878 434 aa15.5■□□□□ 0.07
USP28-209ENST00000540925 ITIH3Q06033 890 aa15.5■□□□□ 0.07
USP28-209ENST00000540925 CBX2Q14781 532 aaPredicted RBP15.5■□□□□ 0.07
USP28-209ENST00000540925 ZBTB6Q15916 424 aa15.5■□□□□ 0.07
USP28-209ENST00000540925 ENOX2Q16206 610 aaKnown RBP15.5■□□□□ 0.07
USP28-209ENST00000540925 TPRNQ4KMQ1 711 aa15.5■□□□□ 0.07
USP28-209ENST00000540925 DCLRE1AQ6PJP8 1040 aa15.5■□□□□ 0.07
USP28-209ENST00000540925 FEZF2Q8TBJ5 459 aa15.5■□□□□ 0.07
USP28-209ENST00000540925 HASPINQ8TF76 798 aa15.5■□□□□ 0.07
USP28-209ENST00000540925 PIK3R5Q8WYR1 880 aa15.5■□□□□ 0.07
USP28-209ENST00000540925 FBXL18Q96ME1 805 aa15.5■□□□□ 0.07
USP28-209ENST00000540925 ADAM7Q9H2U9 754 aa15.5■□□□□ 0.07
USP28-209ENST00000540925 ZHX3Q9H4I2 956 aa15.5■□□□□ 0.07
USP28-209ENST00000540925 PLEKHA5Q9HAU0 1116 aa15.5■□□□□ 0.07
USP28-209ENST00000540925 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.5■□□□□ 0.07
USP28-209ENST00000540925 SLC38A7Q9NVC3 462 aa15.5■□□□□ 0.07
USP28-209ENST00000540925 CFAP45Q9UL16 551 aa15.5■□□□□ 0.07
USP28-209ENST00000540925 TISP43B9A030 160 aa15.49■□□□□ 0.07
USP28-209ENST00000540925 ADH1AP07327 375 aa15.49■□□□□ 0.07
USP28-209ENST00000540925 FGFR3P22607 806 aa15.49■□□□□ 0.07
USP28-209ENST00000540925 KLRC2P26717 231 aa15.49■□□□□ 0.07
USP28-209ENST00000540925 ADSSP30520 456 aa15.49■□□□□ 0.07
USP28-209ENST00000540925 CA8P35219 290 aa15.49■□□□□ 0.07
USP28-209ENST00000540925 KCNA1Q09470 495 aa15.49■□□□□ 0.07
USP28-209ENST00000540925 ELAVL2Q12926 359 aaKnown RBP15.49■□□□□ 0.07
USP28-209ENST00000540925 KYAT1Q16773 422 aa15.49■□□□□ 0.07
USP28-209ENST00000540925 LILRA6Q6PI73 481 aa15.49■□□□□ 0.07
USP28-209ENST00000540925 LNX1Q8TBB1 728 aaPredicted RBP15.49■□□□□ 0.07
USP28-209ENST00000540925 C18orf25Q96B23 403 aaPredicted RBP15.49■□□□□ 0.07
USP28-209ENST00000540925 BICD1Q96G01 975 aa15.49■□□□□ 0.07
USP28-209ENST00000540925 DDX27Q96GQ7 796 aaKnown RBP15.49■□□□□ 0.07
USP28-209ENST00000540925 CHAMP1Q96JM3 812 aa15.49■□□□□ 0.07
USP28-209ENST00000540925 TTPALQ9BTX7 342 aa15.49■□□□□ 0.07
USP28-209ENST00000540925 PHF7Q9BWX1 381 aaPredicted RBP15.49■□□□□ 0.07
USP28-209ENST00000540925 FGFBP2Q9BYJ0 223 aa15.49■□□□□ 0.07
USP28-209ENST00000540925 TRIM9Q9C026 710 aa15.49■□□□□ 0.07
USP28-209ENST00000540925 IKZF4Q9H2S9 585 aa15.49■□□□□ 0.07
USP28-209ENST00000540925 CDH22Q9UJ99 828 aa15.49■□□□□ 0.07
USP28-209ENST00000540925 CPSF3Q9UKF6 684 aaKnown RBP15.49■□□□□ 0.07
USP28-209ENST00000540925 PI4K2BG5E9Z4 385 aa15.48■□□□□ 0.07
USP28-209ENST00000540925 B3GAT3O94766 335 aa15.48■□□□□ 0.07
USP28-209ENST00000540925 RPL9P32969 192 aaKnown RBP15.48■□□□□ 0.07
USP28-209ENST00000540925 EHHADHQ08426 723 aa15.48■□□□□ 0.07
USP28-209ENST00000540925 L1TD1Q5T7N2 865 aaKnown RBP15.48■□□□□ 0.07
USP28-209ENST00000540925 FAM171A1Q5VUB5 890 aa15.48■□□□□ 0.07
USP28-209ENST00000540925 KANK3Q6NY19 840 aa15.48■□□□□ 0.07
USP28-209ENST00000540925 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.48■□□□□ 0.07
USP28-209ENST00000540925 C12orf76Q8N812 135 aaPredicted RBP15.48■□□□□ 0.07
USP28-209ENST00000540925 IQUBQ8NA54 791 aa15.48■□□□□ 0.07
USP28-209ENST00000540925 CMASQ8NFW8 434 aaPredicted RBP15.48■□□□□ 0.07
USP28-209ENST00000540925 RIN2Q8WYP3 895 aaPredicted RBP15.48■□□□□ 0.07
USP28-209ENST00000540925 STAMQ92783 540 aa15.48■□□□□ 0.07
USP28-209ENST00000540925 POP1Q99575 1024 aaKnown RBP15.48■□□□□ 0.07
USP28-209ENST00000540925 CLSTN3Q9BQT9 956 aa15.48■□□□□ 0.07
USP28-209ENST00000540925 MSTO1Q9BUK6 570 aa15.48■□□□□ 0.07
USP28-209ENST00000540925 RHOBTB2Q9BYZ6 727 aa15.48■□□□□ 0.07
USP28-209ENST00000540925 MRPL44Q9H9J2 332 aaKnown RBP15.48■□□□□ 0.07
USP28-209ENST00000540925 PANK4Q9NVE7 773 aa15.48■□□□□ 0.07
USP28-209ENST00000540925 DENND4AQ7Z401 1863 aa15.48■□□□□ 0.07
USP28-209ENST00000540925 PODXLO00592 558 aa15.47■□□□□ 0.07
USP28-209ENST00000540925 MYBP10242 640 aa15.47■□□□□ 0.07
USP28-209ENST00000540925 RPL17P18621 184 aaKnown RBP15.47■□□□□ 0.07
USP28-209ENST00000540925 ME1P48163 572 aa15.47■□□□□ 0.07
USP28-209ENST00000540925 POU5F1Q01860 360 aaKnown RBP15.47■□□□□ 0.07
USP28-209ENST00000540925 CREMQ03060 361 aa15.47■□□□□ 0.07
USP28-209ENST00000540925 HERC4Q5GLZ8 1057 aaPredicted RBP15.47■□□□□ 0.07
USP28-209ENST00000540925 KIAA1841Q6NSI8 718 aa15.47■□□□□ 0.07
USP28-209ENST00000540925 PRSS55Q6UWB4 352 aaPredicted RBP15.47■□□□□ 0.07
USP28-209ENST00000540925 CRELD2Q6UXH1 353 aaPredicted RBP15.47■□□□□ 0.07
USP28-209ENST00000540925 TMEM130Q8N3G9 435 aa15.47■□□□□ 0.07
USP28-209ENST00000540925 HDAC7Q8WUI4 952 aa15.47■□□□□ 0.07
USP28-209ENST00000540925 LEO1Q8WVC0 666 aaPredicted RBP15.47■□□□□ 0.07
USP28-209ENST00000540925 DHX58Q96C10 678 aa15.47■□□□□ 0.07
USP28-209ENST00000540925 TSPAN18Q96SJ8 248 aa15.47■□□□□ 0.07
USP28-209ENST00000540925 C7orf25Q9BPX7 421 aa15.47■□□□□ 0.07
USP28-209ENST00000540925 APOL5Q9BWW9 433 aa15.47■□□□□ 0.07
USP28-209ENST00000540925 EPHX3Q9H6B9 360 aa15.47■□□□□ 0.07
USP28-209ENST00000540925 SFXN1Q9H9B4 322 aa15.47■□□□□ 0.07
USP28-209ENST00000540925 MAGEF1Q9HAY2 307 aa15.47■□□□□ 0.07
USP28-209ENST00000540925 TUBGCP4Q9UGJ1 667 aa15.47■□□□□ 0.07
USP28-209ENST00000540925 ANK1P16157 1881 aa15.46■□□□□ 0.07
USP28-209ENST00000540925 FAM237AA0A1B0GTK4 181 aa15.46■□□□□ 0.07
USP28-209ENST00000540925 LACTBL1A8MY62 500 aa15.46■□□□□ 0.07
USP28-209ENST00000540925 POLR2DO15514 142 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms