RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 TMEM132AQ24JP5 1023 aa13.23□□□□□ -0.29
AP003559.1-201ENST00000540906 RPUSD2Q8IZ73 545 aaKnown RBP13.23□□□□□ -0.29
AP003559.1-201ENST00000540906 EPS8L1Q8TE68 723 aa13.23□□□□□ -0.29
AP003559.1-201ENST00000540906 TMEM40Q8WWA1 233 aa13.23□□□□□ -0.29
AP003559.1-201ENST00000540906 DNAJB3Q8WWF6 145 aa13.23□□□□□ -0.29
AP003559.1-201ENST00000540906 MAP7D2Q96T17 732 aa13.23□□□□□ -0.29
AP003559.1-201ENST00000540906 OSMRQ99650 979 aa13.23□□□□□ -0.29
AP003559.1-201ENST00000540906 AGPAT1Q99943 283 aa13.23□□□□□ -0.29
AP003559.1-201ENST00000540906 Q9Y3F1 56 aa13.23□□□□□ -0.29
AP003559.1-201ENST00000540906 DAAM1Q9Y4D1 1078 aa13.23□□□□□ -0.29
AP003559.1-201ENST00000540906 CENPFP49454 3210 aa13.22□□□□□ -0.29
AP003559.1-201ENST00000540906 ZEB2O60315 1214 aa13.22□□□□□ -0.29
AP003559.1-201ENST00000540906 NFICP08651 508 aa13.22□□□□□ -0.29
AP003559.1-201ENST00000540906 C6orf222P0C671 652 aaPredicted RBP13.22□□□□□ -0.29
AP003559.1-201ENST00000540906 STAG3L1P0CL83 205 aa13.22□□□□□ -0.29
AP003559.1-201ENST00000540906 ACO1P21399 889 aaKnown RBP13.22□□□□□ -0.29
AP003559.1-201ENST00000540906 CPT1AP50416 773 aa13.22□□□□□ -0.29
AP003559.1-201ENST00000540906 MFAP3P55082 362 aa13.22□□□□□ -0.29
AP003559.1-201ENST00000540906 TRAPPC11Q7Z392 1133 aa13.22□□□□□ -0.29
AP003559.1-201ENST00000540906 USP37Q86T82 979 aa13.22□□□□□ -0.29
AP003559.1-201ENST00000540906 ARHGEF26Q96DR7 871 aa13.22□□□□□ -0.29
AP003559.1-201ENST00000540906 SCLT1Q96NL6 688 aa13.22□□□□□ -0.29
AP003559.1-201ENST00000540906 GOLPH3Q9H4A6 298 aa13.22□□□□□ -0.29
AP003559.1-201ENST00000540906 TSKSQ9UJT2 592 aa13.22□□□□□ -0.29
AP003559.1-201ENST00000540906 NRCAMQ92823 1304 aa13.22□□□□□ -0.29
AP003559.1-201ENST00000540906 LACTBL1A8MY62 500 aa13.21□□□□□ -0.29
AP003559.1-201ENST00000540906 DYNC1I1O14576 645 aa13.21□□□□□ -0.29
AP003559.1-201ENST00000540906 DUSP11O75319 330 aaKnown RBP13.21□□□□□ -0.29
AP003559.1-201ENST00000540906 TADA3O75528 432 aa13.21□□□□□ -0.29
AP003559.1-201ENST00000540906 TRPA1O75762 1119 aa13.21□□□□□ -0.29
AP003559.1-201ENST00000540906 ALDH1A1P00352 501 aa13.21□□□□□ -0.29
AP003559.1-201ENST00000540906 MMEP08473 750 aa13.21□□□□□ -0.29
AP003559.1-201ENST00000540906 GALCP54803 685 aa13.21□□□□□ -0.29
AP003559.1-201ENST00000540906 MYL6P60660 151 aa13.21□□□□□ -0.29
AP003559.1-201ENST00000540906 FMO1Q01740 532 aa13.21□□□□□ -0.29
AP003559.1-201ENST00000540906 NCOA4Q13772 614 aa13.21□□□□□ -0.29
AP003559.1-201ENST00000540906 WDR49Q8IV35 697 aa13.21□□□□□ -0.29
AP003559.1-201ENST00000540906 CD99L2Q8TCZ2 262 aa13.21□□□□□ -0.29
AP003559.1-201ENST00000540906 DDX1Q92499 740 aaKnown RBP13.21□□□□□ -0.29
AP003559.1-201ENST00000540906 ERO1AQ96HE7 468 aa13.21□□□□□ -0.29
AP003559.1-201ENST00000540906 EPC1Q9H2F5 836 aa13.21□□□□□ -0.29
AP003559.1-201ENST00000540906 CDC23Q9UJX2 597 aa13.21□□□□□ -0.29
AP003559.1-201ENST00000540906 CASP8AP2Q9UKL3 1982 aa13.21□□□□□ -0.3
AP003559.1-201ENST00000540906 SCN10AQ9Y5Y9 1956 aa13.21□□□□□ -0.3
AP003559.1-201ENST00000540906 SMIM35A0A1B0GVV1 85 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 GRID2IPA4D2P6 1211 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 ZNF185O15231 689 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 PALMO75781 387 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 CLTAP09496 248 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 MCF2P10911 925 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 TNFAIP3P21580 790 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 ANXA13P27216 316 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 HOXA11P31270 313 aaPredicted RBP13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 HOXC8P31273 242 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 GUCY2FP51841 1108 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 GJA9P57773 515 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 NOP14P78316 857 aaKnown RBP13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 TFAMQ00059 246 aaKnown RBP13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 SP3Q02447 781 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 SLC10A6Q3KNW5 377 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 MFSD14CQ5VZR4 134 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 PAPD7Q5XG87 772 aaKnown RBP13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 CXCL17Q6UXB2 119 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 ZNF410Q86VK4 478 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 WNT8BQ93098 351 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 C1orf112Q9NSG2 853 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 SEPT11Q9NVA2 429 aaKnown RBP13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 THSD7BQ9C0I4 1608 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 ZC3H11AO75152 810 aaKnown RBP eCLIP13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 TACC1O75410 805 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 CFHP08603 1231 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 H2AFZP0C0S5 128 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 CYP11B1P15538 503 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 GCNT1Q02742 428 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 CUL2Q13617 745 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 ELF2Q15723 593 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 PTPROQ16827 1216 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 ERCC6LQ2NKX8 1250 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 GNASQ5JWF2 1037 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 H2AFVQ71UI9 128 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 SRGAP1Q7Z6B7 1085 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 UBR7Q8N806 425 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 EIF2AQ9BY44 585 aaKnown RBP13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 UPF3AQ9H1J1 476 aaKnown RBP13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 PUF60Q9UHX1 559 aaKnown RBP13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 SIX4Q9UIU6 781 aa13.2□□□□□ -0.3
AP003559.1-201ENST00000540906 TRIP11Q15643 1979 aa13.19□□□□□ -0.3
AP003559.1-201ENST00000540906 A0A1B0GUA9 196 aa13.19□□□□□ -0.3
AP003559.1-201ENST00000540906 PDE2AO00408 941 aaPredicted RBP13.19□□□□□ -0.3
AP003559.1-201ENST00000540906 B4GALT4O60513 344 aa13.19□□□□□ -0.3
AP003559.1-201ENST00000540906 PHACTR2O75167 634 aa13.19□□□□□ -0.3
AP003559.1-201ENST00000540906 ADAMTS4O75173 837 aa13.19□□□□□ -0.3
AP003559.1-201ENST00000540906 FTCDO95954 541 aa13.19□□□□□ -0.3
AP003559.1-201ENST00000540906 ASS1P00966 412 aaKnown RBP13.19□□□□□ -0.3
AP003559.1-201ENST00000540906 KRT5P13647 590 aa13.19□□□□□ -0.3
AP003559.1-201ENST00000540906 DARSP14868 501 aaKnown RBP13.19□□□□□ -0.3
AP003559.1-201ENST00000540906 ABCB4P21439 1286 aa13.19□□□□□ -0.3
AP003559.1-201ENST00000540906 SSTR3P32745 418 aaPredicted RBP13.19□□□□□ -0.3
AP003559.1-201ENST00000540906 RBM10P98175 930 aaKnown RBP13.19□□□□□ -0.3
AP003559.1-201ENST00000540906 JADE1Q6IE81 842 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms