RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 HCFC2Q9Y5Z7 792 aa18.43■□□□□ 0.54
CD9-209ENST00000540891 A0A1W2PQ27 194 aa18.42■□□□□ 0.54
CD9-209ENST00000540891 A0A1W2PQ64 194 aa18.42■□□□□ 0.54
CD9-209ENST00000540891 A0A1W2PQD8 194 aa18.42■□□□□ 0.54
CD9-209ENST00000540891 GRXCR2A6NFK2 248 aa18.42■□□□□ 0.54
CD9-209ENST00000540891 TMEM189-UBE2V1I3L0A0 370 aa18.42■□□□□ 0.54
CD9-209ENST00000540891 TADA2AO75478 443 aa18.42■□□□□ 0.54
CD9-209ENST00000540891 PRPF6O94906 941 aaKnown RBP18.42■□□□□ 0.54
CD9-209ENST00000540891 ADRB2P07550 413 aa18.42■□□□□ 0.54
CD9-209ENST00000540891 NDUFA8P51970 172 aa18.42■□□□□ 0.54
CD9-209ENST00000540891 DSG1Q02413 1049 aa18.42■□□□□ 0.54
CD9-209ENST00000540891 ALCAMQ13740 583 aa18.42■□□□□ 0.54
CD9-209ENST00000540891 BMS1Q14692 1282 aaKnown RBP18.42■□□□□ 0.54
CD9-209ENST00000540891 ENOX2Q16206 610 aaKnown RBP18.42■□□□□ 0.54
CD9-209ENST00000540891 UPP1Q16831 310 aa18.42■□□□□ 0.54
CD9-209ENST00000540891 PTCRAQ6ISU1 281 aaPredicted RBP18.42■□□□□ 0.54
CD9-209ENST00000540891 LLGL2Q6P1M3 1020 aa18.42■□□□□ 0.54
CD9-209ENST00000540891 UNC13DQ70J99 1090 aa18.42■□□□□ 0.54
CD9-209ENST00000540891 TMEM130Q8N3G9 435 aa18.42■□□□□ 0.54
CD9-209ENST00000540891 C3orf58Q8NDZ4 430 aa18.42■□□□□ 0.54
CD9-209ENST00000540891 C18orf25Q96B23 403 aaPredicted RBP18.42■□□□□ 0.54
CD9-209ENST00000540891 PAGE5Q96GU1 130 aa18.42■□□□□ 0.54
CD9-209ENST00000540891 NECAB3Q96P71 396 aaPredicted RBP18.42■□□□□ 0.54
CD9-209ENST00000540891 KLHL5Q96PQ7 755 aa18.42■□□□□ 0.54
CD9-209ENST00000540891 ACCSQ96QU6 501 aa18.42■□□□□ 0.54
CD9-209ENST00000540891 GOLPH3LQ9H4A5 285 aa18.42■□□□□ 0.54
CD9-209ENST00000540891 PLEKHA5Q9HAU0 1116 aa18.42■□□□□ 0.54
CD9-209ENST00000540891 PCDHB13Q9Y5F0 798 aa18.42■□□□□ 0.54
CD9-209ENST00000540891 CITO14578 2027 aa18.42■□□□□ 0.54
CD9-209ENST00000540891 TCF20Q9UGU0 1960 aaKnown RBP18.41■□□□□ 0.54
CD9-209ENST00000540891 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.41■□□□□ 0.54
CD9-209ENST00000540891 FSD2A1L4K1 749 aa18.41■□□□□ 0.54
CD9-209ENST00000540891 C2CD2LO14523 706 aa18.41■□□□□ 0.54
CD9-209ENST00000540891 MBTPS2O43462 519 aa18.41■□□□□ 0.54
CD9-209ENST00000540891 URODP06132 367 aa18.41■□□□□ 0.54
CD9-209ENST00000540891 CNPP09543 421 aaKnown RBP18.41■□□□□ 0.54
CD9-209ENST00000540891 HOXD13P35453 343 aa18.41■□□□□ 0.54
CD9-209ENST00000540891 GLUD2P49448 558 aa18.41■□□□□ 0.54
CD9-209ENST00000540891 SPAG1Q07617 926 aa18.41■□□□□ 0.54
CD9-209ENST00000540891 ZBTB6Q15916 424 aa18.41■□□□□ 0.54
CD9-209ENST00000540891 KYAT1Q16773 422 aa18.41■□□□□ 0.54
CD9-209ENST00000540891 SLFN12LQ6IEE8 588 aa18.41■□□□□ 0.54
CD9-209ENST00000540891 CEP57L1Q8IYX8 460 aa18.41■□□□□ 0.54
CD9-209ENST00000540891 SLC22A17Q8WUG5 538 aa18.41■□□□□ 0.54
CD9-209ENST00000540891 UROC1Q96N76 676 aa18.41■□□□□ 0.54
CD9-209ENST00000540891 MRPL17Q9NRX2 175 aaKnown RBP18.41■□□□□ 0.54
CD9-209ENST00000540891 SLC38A7Q9NVC3 462 aa18.41■□□□□ 0.54
CD9-209ENST00000540891 CD207Q9UJ71 328 aa18.41■□□□□ 0.54
CD9-209ENST00000540891 SF3B1O75533 1304 aaKnown RBP eCLIP18.41■□□□□ 0.54
CD9-209ENST00000540891 PDCD11Q14690 1871 aaKnown RBP18.41■□□□□ 0.54
CD9-209ENST00000540891 LACTBL1A8MY62 500 aa18.4■□□□□ 0.54
CD9-209ENST00000540891 DLL1O00548 723 aa18.4■□□□□ 0.54
CD9-209ENST00000540891 KLRC4O43908 158 aa18.4■□□□□ 0.54
CD9-209ENST00000540891 B3GAT3O94766 335 aa18.4■□□□□ 0.54
CD9-209ENST00000540891 SYKP43405 635 aa18.4■□□□□ 0.54
CD9-209ENST00000540891 ACOT2P49753 483 aa18.4■□□□□ 0.54
CD9-209ENST00000540891 USP41Q3LFD5 358 aa18.4■□□□□ 0.54
CD9-209ENST00000540891 TPRNQ4KMQ1 711 aa18.4■□□□□ 0.54
CD9-209ENST00000540891 RTP2Q5QGT7 225 aa18.4■□□□□ 0.54
CD9-209ENST00000540891 FAM26FQ5R3K3 315 aa18.4■□□□□ 0.54
CD9-209ENST00000540891 ANKRD54Q6NXT1 300 aa18.4■□□□□ 0.54
CD9-209ENST00000540891 SYCE2Q6PIF2 218 aa18.4■□□□□ 0.54
CD9-209ENST00000540891 DCLRE1AQ6PJP8 1040 aa18.4■□□□□ 0.54
CD9-209ENST00000540891 CRELD2Q6UXH1 353 aaPredicted RBP18.4■□□□□ 0.54
CD9-209ENST00000540891 EPM2AIP1Q7L775 607 aaPredicted RBP18.4■□□□□ 0.54
CD9-209ENST00000540891 FSIP1Q8NA03 581 aa18.4■□□□□ 0.54
CD9-209ENST00000540891 SMRP1Q8NCR6 262 aa18.4■□□□□ 0.54
CD9-209ENST00000540891 ZSWIM2Q8NEG5 633 aa18.4■□□□□ 0.54
CD9-209ENST00000540891 RPF1Q9H9Y2 349 aaKnown RBP18.4■□□□□ 0.54
CD9-209ENST00000540891 RXFP1Q9HBX9 757 aa18.4■□□□□ 0.54
CD9-209ENST00000540891 TUBGCP4Q9UGJ1 667 aa18.4■□□□□ 0.54
CD9-209ENST00000540891 AGO2Q9UKV8 859 aaKnown RBP18.4■□□□□ 0.54
CD9-209ENST00000540891 EXOC7Q9UPT5 735 aa18.4■□□□□ 0.54
CD9-209ENST00000540891 PVALEFA0A1B0GWK0 134 aa18.39■□□□□ 0.53
CD9-209ENST00000540891 EPCAMP16422 314 aa18.39■□□□□ 0.53
CD9-209ENST00000540891 PPP2R3AQ06190 1150 aa18.39■□□□□ 0.53
CD9-209ENST00000540891 SMAD4Q13485 552 aaKnown RBP18.39■□□□□ 0.53
CD9-209ENST00000540891 PUS10Q3MIT2 529 aaKnown RBP18.39■□□□□ 0.53
CD9-209ENST00000540891 FAM171A1Q5VUB5 890 aa18.39■□□□□ 0.53
CD9-209ENST00000540891 GPR65Q8IYL9 337 aa18.39■□□□□ 0.53
CD9-209ENST00000540891 POMGNT1Q8WZA1 660 aa18.39■□□□□ 0.53
CD9-209ENST00000540891 CASP10Q92851 521 aa18.39■□□□□ 0.53
CD9-209ENST00000540891 DDX27Q96GQ7 796 aaKnown RBP18.39■□□□□ 0.53
CD9-209ENST00000540891 UHRF1Q96T88 793 aaPredicted RBP18.39■□□□□ 0.53
CD9-209ENST00000540891 EMILIN2Q9BXX0 1053 aa18.39■□□□□ 0.53
CD9-209ENST00000540891 TMEM206Q9H813 350 aa18.39■□□□□ 0.53
CD9-209ENST00000540891 USP25Q9UHP3 1055 aa18.39■□□□□ 0.53
CD9-209ENST00000540891 SSX2IPQ9Y2D8 614 aa18.39■□□□□ 0.53
CD9-209ENST00000540891 PODXLO00592 558 aa18.38■□□□□ 0.53
CD9-209ENST00000540891 TEX28O15482 410 aa18.38■□□□□ 0.53
CD9-209ENST00000540891 BRCC3P46736 316 aa18.38■□□□□ 0.53
CD9-209ENST00000540891 CLCN4P51793 760 aa18.38■□□□□ 0.53
CD9-209ENST00000540891 POSTNQ15063 836 aa18.38■□□□□ 0.53
CD9-209ENST00000540891 KIAA1841Q6NSI8 718 aa18.38■□□□□ 0.53
CD9-209ENST00000540891 SYCP3Q8IZU3 236 aa18.38■□□□□ 0.53
CD9-209ENST00000540891 ZNF507Q8TCN5 953 aa18.38■□□□□ 0.53
CD9-209ENST00000540891 SCFD1Q8WVM8 642 aa18.38■□□□□ 0.53
CD9-209ENST00000540891 RIN2Q8WYP3 895 aaPredicted RBP18.38■□□□□ 0.53
CD9-209ENST00000540891 KIF12Q96FN5 646 aa18.38■□□□□ 0.53
CD9-209ENST00000540891 CBWD1Q9BRT8 395 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms