RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 TGM1P22735 817 aa5.26□□□□□ -1.57
SNHG1-214ENST00000540865 POLGP54098 1239 aaPredicted RBP5.26□□□□□ -1.57
SNHG1-214ENST00000540865 HAND2P61296 217 aa5.26□□□□□ -1.57
SNHG1-214ENST00000540865 DMWDQ09019 674 aa5.26□□□□□ -1.57
SNHG1-214ENST00000540865 LETM2Q2VYF4 491 aa5.26□□□□□ -1.57
SNHG1-214ENST00000540865 MCMDC2Q4G0Z9 681 aa5.26□□□□□ -1.57
SNHG1-214ENST00000540865 SPECC1Q5M775 1068 aa5.26□□□□□ -1.57
SNHG1-214ENST00000540865 PCNX4Q63HM2 1172 aa5.26□□□□□ -1.57
SNHG1-214ENST00000540865 TXNDC11Q6PKC3 985 aa5.26□□□□□ -1.57
SNHG1-214ENST00000540865 CYP26C1Q6V0L0 522 aa5.26□□□□□ -1.57
SNHG1-214ENST00000540865 C15orf39Q6ZRI6 1047 aa5.26□□□□□ -1.57
SNHG1-214ENST00000540865 DMRTC2Q8IXT2 367 aaPredicted RBP5.26□□□□□ -1.57
SNHG1-214ENST00000540865 MAML2Q8IZL2 1156 aaPredicted RBP5.26□□□□□ -1.57
SNHG1-214ENST00000540865 ABI1Q8IZP0 508 aa5.26□□□□□ -1.57
SNHG1-214ENST00000540865 SLC44A3Q8N4M1 653 aa5.26□□□□□ -1.57
SNHG1-214ENST00000540865 IL22RA1Q8N6P7 574 aa5.26□□□□□ -1.57
SNHG1-214ENST00000540865 ENAHQ8N8S7 591 aaPredicted RBP5.26□□□□□ -1.57
SNHG1-214ENST00000540865 ATRIPQ8WXE1 791 aa5.26□□□□□ -1.57
SNHG1-214ENST00000540865 ZBTB10Q96DT7 871 aa5.26□□□□□ -1.57
SNHG1-214ENST00000540865 RHOBTB2Q9BYZ6 727 aa5.26□□□□□ -1.57
SNHG1-214ENST00000540865 ZBP1Q9H171 429 aa5.26□□□□□ -1.57
SNHG1-214ENST00000540865 EPC1Q9H2F5 836 aa5.26□□□□□ -1.57
SNHG1-214ENST00000540865 AZI2Q9H6S1 392 aa5.26□□□□□ -1.57
SNHG1-214ENST00000540865 DCTPP1Q9H773 170 aa5.26□□□□□ -1.57
SNHG1-214ENST00000540865 NOP53Q9NZM5 478 aaKnown RBP5.26□□□□□ -1.57
SNHG1-214ENST00000540865 EPS15L1Q9UBC2 864 aa5.26□□□□□ -1.57
SNHG1-214ENST00000540865 CA14Q9ULX7 337 aa5.26□□□□□ -1.57
SNHG1-214ENST00000540865 SETXQ7Z333 2677 aaKnown RBP5.26□□□□□ -1.57
SNHG1-214ENST00000540865 NEDD4P46934 1319 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 MYO10Q9HD67 2058 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-214ENST00000540865 PIK3R2O00459 728 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 ZNF213O14771 459 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 SLC30A4O14863 429 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 MAFGO15525 162 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 LAMTOR5O43504 91 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 ATP9AO75110 1047 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 CTSAP10619 480 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 GLULP15104 373 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 CA8P35219 290 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 PBX3P40426 434 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 MAGEA9P43362 315 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 ALDH7A1P49419 539 aaKnown RBP5.25□□□□□ -1.57
SNHG1-214ENST00000540865 SLC26A2P50443 739 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 CRYBB1P53674 252 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-214ENST00000540865 STARD6P59095 220 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 PLCB4Q15147 1175 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.25□□□□□ -1.572e-12■■□□□ 11.6
SNHG1-214ENST00000540865 PPM1JQ5JR12 505 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 DCLRE1AQ6PJP8 1040 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 MTHFD1LQ6UB35 978 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 PLPPR4Q7Z2D5 763 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 KIAA0319LQ8IZA0 1049 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 ZBTB44Q8NCP5 570 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 CMASQ8NFW8 434 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-214ENST00000540865 PJA1Q8NG27 643 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 NETO1Q8TDF5 533 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 ASAP3Q8TDY4 903 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 TMEM40Q8WWA1 233 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 RSAD2Q8WXG1 361 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 RSPH1Q8WYR4 309 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 STAMQ92783 540 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 NELL1Q92832 810 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 EVI5LQ96CN4 794 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 TMEM169Q96HH4 297 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 SHDQ96IW2 340 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 TCF12Q99081 682 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 PCYT2Q99447 389 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 RIOX1Q9H6W3 641 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 LIN7BQ9HAP6 207 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 ARHGEF3Q9NR81 526 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 SLC2A4RGQ9NR83 387 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 ZSCAN32Q9NX65 697 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 STK39Q9UEW8 545 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 MAD2L2Q9UI95 211 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 RALYQ9UKM9 306 aaKnown RBP5.25□□□□□ -1.57
SNHG1-214ENST00000540865 ANGPTL2Q9UKU9 493 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 USP18Q9UMW8 372 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 SMG5Q9UPR3 1016 aaKnown RBP5.25□□□□□ -1.57
SNHG1-214ENST00000540865 LAMA5O15230 3695 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 MYH7P12883 1935 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 KIAA1217Q5T5P2 1943 aa5.25□□□□□ -1.57
SNHG1-214ENST00000540865 CNOT1A5YKK6 2376 aaKnown RBP5.24□□□□□ -1.57
SNHG1-214ENST00000540865 CCER2I3L3R5 266 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 LRP3O75074 770 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 N4BP1O75113 896 aaKnown RBP5.24□□□□□ -1.57
SNHG1-214ENST00000540865 ZSCAN20P17040 1043 aaPredicted RBP5.24□□□□□ -1.57
SNHG1-214ENST00000540865 ITGB5P18084 799 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 EPHA1P21709 976 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 KLRC1P26715 233 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 GBP2P32456 591 aaPredicted RBP5.24□□□□□ -1.57
SNHG1-214ENST00000540865 GRIA4P48058 902 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 STAT5BP51692 787 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 BCAR1P56945 870 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 SHC2P98077 582 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 CSTF1Q05048 431 aaKnown RBP5.24□□□□□ -1.57
SNHG1-214ENST00000540865 GRM2Q14416 872 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 PTPN14Q15678 1187 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 SLC35G1Q2M3R5 365 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 SPRED3Q2MJR0 410 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms