RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 SLC38A6Q8IZM9 456 aa10.03□□□□□ -0.8
CLIP1-214ENST00000540539 ANKRD42Q8N9B4 389 aa10.03□□□□□ -0.8
CLIP1-214ENST00000540539 SEC14L1Q92503 715 aa10.03□□□□□ -0.8
CLIP1-214ENST00000540539 ERLEC1Q96DZ1 483 aa10.03□□□□□ -0.8
CLIP1-214ENST00000540539 PAGE5Q96GU1 130 aa10.03□□□□□ -0.8
CLIP1-214ENST00000540539 AP1M1Q9BXS5 423 aa10.03□□□□□ -0.8
CLIP1-214ENST00000540539 NT5C3AQ9H0P0 336 aa10.03□□□□□ -0.8
CLIP1-214ENST00000540539 AMACRQ9UHK6 382 aa10.03□□□□□ -0.8
CLIP1-214ENST00000540539 STXBP5LQ9Y2K9 1186 aa10.03□□□□□ -0.8
CLIP1-214ENST00000540539 NUP98P52948 1817 aa10.03□□□□□ -0.8
CLIP1-214ENST00000540539 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.03□□□□□ -0.8
CLIP1-214ENST00000540539 GOLGA8BA8MQT2 603 aa10.03□□□□□ -0.8
CLIP1-214ENST00000540539 EXOC3O60645 756 aa10.03□□□□□ -0.8
CLIP1-214ENST00000540539 ENO2P09104 434 aaPredicted RBP10.03□□□□□ -0.8
CLIP1-214ENST00000540539 SRGNP10124 158 aa10.03□□□□□ -0.8
CLIP1-214ENST00000540539 RPS3AP61247 264 aaKnown RBP10.03□□□□□ -0.8
CLIP1-214ENST00000540539 EHHADHQ08426 723 aa10.03□□□□□ -0.8
CLIP1-214ENST00000540539 SF3B4Q15427 424 aaKnown RBP eCLIP10.03□□□□□ -0.8
CLIP1-214ENST00000540539 KCNJ8Q15842 424 aa10.03□□□□□ -0.8
CLIP1-214ENST00000540539 HSP90AA5PQ58FG0 334 aa10.03□□□□□ -0.8
CLIP1-214ENST00000540539 ZFYVE27Q5T4F4 411 aa10.03□□□□□ -0.8
CLIP1-214ENST00000540539 RRAGBQ5VZM2 374 aa10.03□□□□□ -0.8
CLIP1-214ENST00000540539 PCNX4Q63HM2 1172 aa10.03□□□□□ -0.8
CLIP1-214ENST00000540539 VSTM1Q6UX27 236 aa10.03□□□□□ -0.8
CLIP1-214ENST00000540539 SH3RF1Q7Z6J0 888 aa10.03□□□□□ -0.8
CLIP1-214ENST00000540539 SUN5Q8TC36 379 aa10.03□□□□□ -0.8
CLIP1-214ENST00000540539 ACTRT2Q8TDY3 377 aa10.03□□□□□ -0.8
CLIP1-214ENST00000540539 GIPC2Q8TF65 315 aa10.03□□□□□ -0.8
CLIP1-214ENST00000540539 TCF12Q99081 682 aa10.03□□□□□ -0.8
CLIP1-214ENST00000540539 CTRCQ99895 268 aa10.03□□□□□ -0.8
CLIP1-214ENST00000540539 METTL22Q9BUU2 404 aaPredicted RBP10.03□□□□□ -0.8
CLIP1-214ENST00000540539 RTFDC1Q9BY42 306 aaPredicted RBP10.03□□□□□ -0.8
CLIP1-214ENST00000540539 SENP6Q9GZR1 1112 aaPredicted RBP10.03□□□□□ -0.8
CLIP1-214ENST00000540539 CCDC8Q9H0W5 538 aaPredicted RBP10.03□□□□□ -0.8
CLIP1-214ENST00000540539 ZNF304Q9HCX3 659 aa10.03□□□□□ -0.8
CLIP1-214ENST00000540539 SLC38A7Q9NVC3 462 aa10.03□□□□□ -0.8
CLIP1-214ENST00000540539 WDR70Q9NW82 654 aa10.03□□□□□ -0.8
CLIP1-214ENST00000540539 KLHL3Q9UH77 587 aa10.03□□□□□ -0.8
CLIP1-214ENST00000540539 DBR1Q9UK59 544 aaKnown RBP10.03□□□□□ -0.8
CLIP1-214ENST00000540539 GTF3C4Q9UKN8 822 aa10.03□□□□□ -0.8
CLIP1-214ENST00000540539 MYH11P35749 1972 aa10.02□□□□□ -0.8
CLIP1-214ENST00000540539 A0A087WZG4 1122 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 E7EWF7 191 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 K7EPI3 171 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 MAPK13O15264 365 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 B4GALT4O60513 344 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 TMCC2O75069 709 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 GUCY1B2O75343 617 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 PARNO95453 639 aaKnown RBP10.02□□□□□ -0.81
CLIP1-214ENST00000540539 CLPTM1O96005 669 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 ANPEPP15144 967 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 S100A5P33763 92 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 PCYT1AP49585 367 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 PLCB3Q01970 1234 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 THOC5Q13769 683 aaKnown RBP10.02□□□□□ -0.81
CLIP1-214ENST00000540539 AUHQ13825 339 aaKnown RBP10.02□□□□□ -0.81
CLIP1-214ENST00000540539 PDE1CQ14123 709 aaPredicted RBP10.02□□□□□ -0.81
CLIP1-214ENST00000540539 SLC29A2Q14542 456 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 MEI1Q5TIA1 1274 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 GPIHBP1Q8IV16 184 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 ESR2Q92731 530 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 EAF2Q96CJ1 260 aaPredicted RBP10.02□□□□□ -0.81
CLIP1-214ENST00000540539 GRAMD1AQ96CP6 724 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 MYD88Q99836 296 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 ALG1Q9BT22 464 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 GRIP2Q9C0E4 1043 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 STMN4Q9H169 189 aaPredicted RBP10.02□□□□□ -0.81
CLIP1-214ENST00000540539 NLRC4Q9NPP4 1024 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 GIN1Q9NXP7 522 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.02□□□□□ -0.81
CLIP1-214ENST00000540539 VPS51Q9UID3 782 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 PA2G4Q9UQ80 394 aaKnown RBP10.02□□□□□ -0.81
CLIP1-214ENST00000540539 TRAF3IP3Q9Y228 551 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 PCDHGA3Q9Y5H0 932 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 PNPLA7Q6ZV29 1317 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 STK36Q9NRP7 1315 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 ARHGAP10A1A4S6 786 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 ERVV-1B6SEH8 477 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 FOXD2O60548 495 aaPredicted RBP10.02□□□□□ -0.81
CLIP1-214ENST00000540539 DNAJC6O75061 913 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 HAUS5O94927 633 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 EEF2P13639 858 aaKnown RBP10.02□□□□□ -0.81
CLIP1-214ENST00000540539 AMPD1P23109 780 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 UBA7P41226 1012 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 SLC1A4P43007 532 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 PHKA2P46019 1235 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 CHN2P52757 468 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 VCPP55072 806 aaKnown RBP10.02□□□□□ -0.81
CLIP1-214ENST00000540539 ACAP1Q15027 740 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 TWF2Q6IBS0 349 aaKnown RBP10.02□□□□□ -0.81
CLIP1-214ENST00000540539 DHRS4L2Q6PKH6 230 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 UGT2A3Q6UWM9 527 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 USP43Q70EL4 1123 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 C2CD5Q86YS7 1000 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 RHOT2Q8IXI1 618 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 OR6Y1Q8NGX8 325 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 EME1Q96AY2 570 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 EFHD2Q96C19 240 aaPredicted RBP10.02□□□□□ -0.81
CLIP1-214ENST00000540539 MED30Q96HR3 178 aa10.02□□□□□ -0.81
CLIP1-214ENST00000540539 EPSTI1Q96J88 318 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms