RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 AMHR2Q16671 573 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 PLA2G2CQ5R387 149 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 DAB2IPQ5VWQ8 1189 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 LILRA6Q6PI73 481 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 B3GNT9Q6UX72 402 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 SPATA31D4Q6ZUB0 917 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 GRASPQ7Z6J2 395 aaPredicted RBP9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 GPR65Q8IYL9 337 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 SPEM1Q8N4L4 309 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 HAS1Q92839 578 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 SLC5A5Q92911 643 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 SNX21Q969T3 373 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 FAM193BQ96PV7 902 aaPredicted RBP9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 MAP7D2Q96T17 732 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 GBP3Q9H0R5 595 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 TBC1D22BQ9NU19 505 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 UNC79Q9P2D8 2635 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 KANSL3Q9P2N6 904 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 DAXXQ9UER7 740 aaPredicted RBP9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 NDRG2Q9UN36 371 aaKnown RBP9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 MSRB2Q9Y3D2 182 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 GPSM3Q9Y4H4 160 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 LAMA5O15230 3695 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 F5P12259 2224 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 IGSF10Q6WRI0 2623 aa9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 ZBTB42B2RXF5 422 aa9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 NRP1O14786 923 aa9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 GIPC1O14908 333 aa9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 CCNT1O60563 726 aaKnown RBP9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 EPN2O95208 641 aa9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 HNRNPA1P09651 372 aaKnown RBP eCLIP9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 DARSP14868 501 aaKnown RBP9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 NCLP19338 710 aaKnown RBP9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 ATP4AP20648 1035 aa9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 CSRP1P21291 193 aaKnown RBP9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 U2AF2P26368 475 aaKnown RBP eCLIP9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 RAP1GAPP47736 663 aa9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 GLUD2P49448 558 aa9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 DSG1Q02413 1049 aa9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 SWSAP1Q6NVH7 229 aa9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 PALB2Q86YC2 1186 aa9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 ZNF280BQ86YH2 543 aa9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 GLIS3Q8NEA6 775 aa9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 ETNPPLQ8TBG4 499 aa9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 URGCPQ8TCY9 931 aa9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 RIT2Q99578 217 aa9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 KXD1Q9BQD3 176 aa9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 FOXP1Q9H334 677 aaPredicted RBP9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 SLC24A3Q9HC58 644 aa9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 BRMS1Q9HCU9 246 aa9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 KCNMB3Q9NPA1 279 aa9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 VPS45Q9NRW7 570 aa9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 FNIP2Q9P278 1114 aa9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 DDX25Q9UHL0 483 aaKnown RBP9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 CEP131Q9UPN4 1083 aa9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 SMC3Q9UQE7 1217 aa9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 AKT3Q9Y243 479 aa9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 INPP5FQ9Y2H2 1132 aa9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 COL4A3Q01955 1670 aa9.85□□□□□ -0.83
TRAPPC1-202ENST00000540486 MYH15Q9Y2K3 1946 aa9.84□□□□□ -0.83
TRAPPC1-202ENST00000540486 K7ELQ4 463 aaPredicted RBP9.84□□□□□ -0.83
TRAPPC1-202ENST00000540486 BACH1O14867 736 aa9.84□□□□□ -0.83
TRAPPC1-202ENST00000540486 TRIM66O15016 1216 aa9.84□□□□□ -0.83
TRAPPC1-202ENST00000540486 DDHD2O94830 711 aa9.84□□□□□ -0.83
TRAPPC1-202ENST00000540486 EFEMP2O95967 443 aa9.84□□□□□ -0.83
TRAPPC1-202ENST00000540486 TOP3BO95985 862 aaKnown RBP9.84□□□□□ -0.83
TRAPPC1-202ENST00000540486 TOB1P50616 345 aaPredicted RBP9.84□□□□□ -0.83
TRAPPC1-202ENST00000540486 RAB27AP51159 221 aa9.84□□□□□ -0.83
TRAPPC1-202ENST00000540486 CDC42EP1Q00587 391 aa9.84□□□□□ -0.83
TRAPPC1-202ENST00000540486 SAFBQ15424 915 aaKnown RBP eCLIP9.84□□□□□ -0.83
TRAPPC1-202ENST00000540486 SH3PXD2AQ5TCZ1 1133 aa9.84□□□□□ -0.83
TRAPPC1-202ENST00000540486 ZNF746Q6NUN9 644 aaPredicted RBP9.84□□□□□ -0.83
TRAPPC1-202ENST00000540486 PDXDC2PQ6P474 469 aa9.84□□□□□ -0.83
TRAPPC1-202ENST00000540486 TAS1R1Q7RTX1 841 aa9.84□□□□□ -0.83
TRAPPC1-202ENST00000540486 CACNA2D4Q7Z3S7 1137 aa9.84□□□□□ -0.83
TRAPPC1-202ENST00000540486 WDR5BQ86VZ2 330 aa9.84□□□□□ -0.83
TRAPPC1-202ENST00000540486 PROSER1Q86XN7 944 aa9.84□□□□□ -0.83
TRAPPC1-202ENST00000540486 CCDC60Q8IWA6 550 aaPredicted RBP9.84□□□□□ -0.83
TRAPPC1-202ENST00000540486 RNF168Q8IYW5 571 aaPredicted RBP9.84□□□□□ -0.83
TRAPPC1-202ENST00000540486 ADAM32Q8TC27 787 aa9.84□□□□□ -0.83
TRAPPC1-202ENST00000540486 FAM3CQ92520 227 aa9.84□□□□□ -0.83
TRAPPC1-202ENST00000540486 LPPQ93052 612 aa9.84□□□□□ -0.83
TRAPPC1-202ENST00000540486 PGBD4Q96DM1 585 aa9.84□□□□□ -0.83
TRAPPC1-202ENST00000540486 TMUB1Q9BVT8 246 aa9.84□□□□□ -0.83
TRAPPC1-202ENST00000540486 UNC45AQ9H3U1 944 aa9.84□□□□□ -0.83
TRAPPC1-202ENST00000540486 ZNF302Q9NR11 478 aa9.84□□□□□ -0.83
TRAPPC1-202ENST00000540486 CHST7Q9NS84 486 aa9.84□□□□□ -0.83
TRAPPC1-202ENST00000540486 CACNA2D2Q9NY47 1150 aa9.84□□□□□ -0.83
TRAPPC1-202ENST00000540486 TSR3Q9UJK0 312 aaKnown RBP9.84□□□□□ -0.83
TRAPPC1-202ENST00000540486 KCNH3Q9ULD8 1083 aa9.84□□□□□ -0.83
TRAPPC1-202ENST00000540486 MAFBQ9Y5Q3 323 aaPredicted RBP9.84□□□□□ -0.83
TRAPPC1-202ENST00000540486 K7ESF4 209 aa9.83□□□□□ -0.84
TRAPPC1-202ENST00000540486 EML1O00423 815 aa9.83□□□□□ -0.84
TRAPPC1-202ENST00000540486 CHRNB1P11230 501 aa9.83□□□□□ -0.84
TRAPPC1-202ENST00000540486 GCFC2P16383 781 aaKnown RBP9.83□□□□□ -0.84
TRAPPC1-202ENST00000540486 ATP2B1P20020 1258 aa9.83□□□□□ -0.84
TRAPPC1-202ENST00000540486 HOXA9P31269 272 aa9.83□□□□□ -0.84
TRAPPC1-202ENST00000540486 GPC3P51654 580 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms