RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 TTC26A0AVF1 554 aa12.7□□□□□ -0.38
VTN-202ENST00000539746 GYPCP04921 128 aa12.7□□□□□ -0.38
VTN-202ENST00000539746 CCDC175P0C221 793 aa12.7□□□□□ -0.38
VTN-202ENST00000539746 TRIM49P0CI25 452 aa12.7□□□□□ -0.38
VTN-202ENST00000539746 TRIM49CP0CI26 452 aa12.7□□□□□ -0.38
VTN-202ENST00000539746 ACTN1P12814 892 aa12.7□□□□□ -0.38
VTN-202ENST00000539746 KCNE1P15382 129 aa12.7□□□□□ -0.38
VTN-202ENST00000539746 PTGS1P23219 599 aa12.7□□□□□ -0.38
VTN-202ENST00000539746 RPL9P32969 192 aaKnown RBP12.7□□□□□ -0.38
VTN-202ENST00000539746 SNX16P57768 344 aa12.7□□□□□ -0.38
VTN-202ENST00000539746 POLR2FP61218 127 aaKnown RBP12.7□□□□□ -0.38
VTN-202ENST00000539746 EPC2Q52LR7 807 aa12.7□□□□□ -0.38
VTN-202ENST00000539746 GLB1LQ6UWU2 654 aa12.7□□□□□ -0.38
VTN-202ENST00000539746 RRAGAQ7L523 313 aa12.7□□□□□ -0.38
VTN-202ENST00000539746 ZNF677Q86XU0 584 aa12.7□□□□□ -0.38
VTN-202ENST00000539746 ABI1Q8IZP0 508 aa12.7□□□□□ -0.38
VTN-202ENST00000539746 SPATA18Q8TC71 538 aa12.7□□□□□ -0.38
VTN-202ENST00000539746 MRPL9Q9BYD2 267 aaKnown RBP12.7□□□□□ -0.38
VTN-202ENST00000539746 TMEM117Q9H0C3 514 aa12.7□□□□□ -0.38
VTN-202ENST00000539746 HIPK3Q9H422 1215 aa12.7□□□□□ -0.38
VTN-202ENST00000539746 CYP3A43Q9HB55 503 aa12.7□□□□□ -0.38
VTN-202ENST00000539746 ERVK-5Q9HDB9 667 aa12.7□□□□□ -0.38
VTN-202ENST00000539746 TRMT13Q9NUP7 481 aaKnown RBP12.7□□□□□ -0.38
VTN-202ENST00000539746 FAM105AQ9NUU6 356 aa12.7□□□□□ -0.38
VTN-202ENST00000539746 AIPL1Q9NZN9 384 aa12.7□□□□□ -0.38
VTN-202ENST00000539746 CNTN3Q9P232 1028 aa12.7□□□□□ -0.38
VTN-202ENST00000539746 PADI3Q9ULW8 664 aa12.7□□□□□ -0.38
VTN-202ENST00000539746 CEP83Q9Y592 693 aa12.7□□□□□ -0.38
VTN-202ENST00000539746 UMODL1Q5DID0 1318 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 ABLIM1O14639 778 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 B4GALT5O43286 388 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 AP5Z1O43299 807 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 FAM189A1O60320 539 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 PQBP1O60828 265 aaKnown RBP12.69□□□□□ -0.38
VTN-202ENST00000539746 CHRNA1P02708 482 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 CTSHP09668 335 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 HOXA11P31270 313 aaPredicted RBP12.69□□□□□ -0.38
VTN-202ENST00000539746 TNNC1P63316 161 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 ZNF200P98182 395 aaPredicted RBP12.69□□□□□ -0.38
VTN-202ENST00000539746 CAP1Q01518 475 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 KLHL30Q0D2K2 578 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 RAPGEF1Q13905 1077 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 ENOX2Q16206 610 aaKnown RBP12.69□□□□□ -0.38
VTN-202ENST00000539746 MEA1Q16626 185 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 IFI16Q16666 785 aaKnown RBP12.69□□□□□ -0.38
VTN-202ENST00000539746 ZNF699Q32M78 642 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 SV2CQ496J9 727 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 ZNF667Q5HYK9 610 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 CRELD2Q6UXH1 353 aaPredicted RBP12.69□□□□□ -0.38
VTN-202ENST00000539746 TRAPPC11Q7Z392 1133 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 FAM228AQ86W67 206 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 PPM1KQ8N3J5 372 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 TMEM199Q8N511 208 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 MSANTD4Q8NCY6 345 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 CPLX3Q8WVH0 158 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 KIF12Q96FN5 646 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 CPB2Q96IY4 423 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 SNX27Q96L92 541 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 PPP1R16BQ96T49 567 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 HTATIP2Q9BUP3 242 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 NIF3L1Q9GZT8 377 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 MIS12Q9H081 205 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 MTIF3Q9H2K0 278 aaKnown RBP12.69□□□□□ -0.38
VTN-202ENST00000539746 VRTNQ9H8Y1 702 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 PDE11AQ9HCR9 933 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 PARP2Q9UGN5 583 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 LCMT1Q9UIC8 334 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 KIAA1257Q9ULG3 409 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 LRFN2Q9ULH4 789 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 NOC2LQ9Y3T9 749 aaKnown RBP12.69□□□□□ -0.38
VTN-202ENST00000539746 PCDHB2Q9Y5E7 798 aa12.69□□□□□ -0.38
VTN-202ENST00000539746 GRIN2DO15399 1336 aa12.68□□□□□ -0.38
VTN-202ENST00000539746 ATP8B3O60423 1300 aa12.68□□□□□ -0.38
VTN-202ENST00000539746 MED7O43513 233 aa12.68□□□□□ -0.38
VTN-202ENST00000539746 AKR1B10O60218 316 aa12.68□□□□□ -0.38
VTN-202ENST00000539746 CLTBP09497 229 aa12.68□□□□□ -0.38
VTN-202ENST00000539746 CXCL8P10145 99 aa12.68□□□□□ -0.38
VTN-202ENST00000539746 FECHP22830 423 aa12.68□□□□□ -0.38
VTN-202ENST00000539746 SOX5P35711 763 aa12.68□□□□□ -0.38
VTN-202ENST00000539746 PTK2Q05397 1052 aa12.68□□□□□ -0.38
VTN-202ENST00000539746 MTFR1Q15390 333 aa12.68□□□□□ -0.38
VTN-202ENST00000539746 STILQ15468 1287 aa12.68□□□□□ -0.38
VTN-202ENST00000539746 TRIM71Q2Q1W2 868 aaKnown RBP12.68□□□□□ -0.38
VTN-202ENST00000539746 TDRD12Q587J7 1177 aaKnown RBP12.68□□□□□ -0.38
VTN-202ENST00000539746 ZNF618Q5T7W0 954 aa12.68□□□□□ -0.38
VTN-202ENST00000539746 PDXDC1Q6P996 788 aa12.68□□□□□ -0.38
VTN-202ENST00000539746 C15orf39Q6ZRI6 1047 aa12.68□□□□□ -0.38
VTN-202ENST00000539746 MRPL10Q7Z7H8 261 aaKnown RBP12.68□□□□□ -0.38
VTN-202ENST00000539746 TC2NQ8N9U0 490 aa12.68□□□□□ -0.38
VTN-202ENST00000539746 TRIM11Q96F44 468 aa12.68□□□□□ -0.38
VTN-202ENST00000539746 ZBTB45Q96K62 511 aaPredicted RBP12.68□□□□□ -0.38
VTN-202ENST00000539746 CRACR2AQ9BSW2 395 aa12.68□□□□□ -0.38
VTN-202ENST00000539746 TTYH3Q9C0H2 523 aa12.68□□□□□ -0.38
VTN-202ENST00000539746 TRPV6Q9H1D0 765 aa12.68□□□□□ -0.38
VTN-202ENST00000539746 RGS18Q9NS28 235 aa12.68□□□□□ -0.38
VTN-202ENST00000539746 TMEM39AQ9NV64 488 aa12.68□□□□□ -0.38
VTN-202ENST00000539746 DNAJC12Q9UKB3 198 aa12.68□□□□□ -0.38
VTN-202ENST00000539746 DSEQ9UL01 958 aa12.68□□□□□ -0.38
VTN-202ENST00000539746 IPPQ9Y573 584 aa12.68□□□□□ -0.38
VTN-202ENST00000539746 TISP43B9A030 160 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms