RNA–Protein interactions for RNA: ENST00000539416.5

NEK6-212, Transcript of NIMA related kinase 6, humanhuman

TSL 2 BASIC

Gene NEK6, Length 2,582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-212ENST00000539416 NEK3P51956 506 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 COASYQ13057 564 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 PPP2R5EQ16537 467 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 ABCB5Q2M3G0 1257 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 WDR72Q3MJ13 1102 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 LCA5Q86VQ0 697 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 ART4Q93070 314 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 MKL1Q969V6 931 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 GRAMD1AQ96CP6 724 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 VCX3BQ9H321 246 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 VCX3AQ9NNX9 186 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 NYAP2Q9P242 653 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 PDP2Q9P2J9 529 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 BIN2Q9UBW5 565 aaPredicted RBP12.69□□□□□ -0.38
NEK6-212ENST00000539416 INTUQ9ULD6 942 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 BZW2Q9Y6E2 419 aaKnown RBP12.69□□□□□ -0.38
NEK6-212ENST00000539416 NUMBLQ9Y6R0 609 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 NPHP3-ACAD11A0A0J9YXS1 232 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 TTLL1O95922 423 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 LMNAP02545 664 aaKnown RBP12.69□□□□□ -0.38
NEK6-212ENST00000539416 LYNP07948 512 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 PRKCIP41743 596 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 MARCKSL1P49006 195 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 RTP1P59025 263 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 BPIFB4P59827 614 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 MTA1Q13330 715 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 MOGSQ13724 837 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 CTTNQ14247 550 aaKnown RBP12.69□□□□□ -0.38
NEK6-212ENST00000539416 KPNB1Q14974 876 aaKnown RBP12.69□□□□□ -0.38
NEK6-212ENST00000539416 CDAN1Q8IWY9 1227 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 SRRM1Q8IYB3 904 aaKnown RBP12.69□□□□□ -0.38
NEK6-212ENST00000539416 PNMA1Q8ND90 353 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 OLIG1Q8TAK6 271 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 ZC3H15Q8WU90 426 aaKnown RBP12.69□□□□□ -0.38
NEK6-212ENST00000539416 RAD54LQ92698 747 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 ARHGEF26Q96DR7 871 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 CEP63Q96MT8 703 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 CADM1Q9BY67 442 aaKnown RBP12.69□□□□□ -0.38
NEK6-212ENST00000539416 GINM1Q9NU53 330 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 ETNK2Q9NVF9 386 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 RHBDL2Q9NX52 303 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 GGA3Q9NZ52 723 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 LNPEPQ9UIQ6 1025 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 PHTF1Q9UMS5 762 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 ZNF510Q9Y2H8 683 aa12.69□□□□□ -0.38
NEK6-212ENST00000539416 hCG_2014768A0A024R1R8 64 aa12.68□□□□□ -0.38
NEK6-212ENST00000539416 TCRBV7S2A1N4TA0A589 114 aa12.68□□□□□ -0.38
NEK6-212ENST00000539416 CYTH3O43739 400 aa12.68□□□□□ -0.38
NEK6-212ENST00000539416 FAM200BP0CF97 657 aa12.68□□□□□ -0.38
NEK6-212ENST00000539416 PON1P27169 355 aa12.68□□□□□ -0.38
NEK6-212ENST00000539416 PTPN4P29074 926 aa12.68□□□□□ -0.38
NEK6-212ENST00000539416 EPHX2P34913 555 aa12.68□□□□□ -0.38
NEK6-212ENST00000539416 CHKAP35790 457 aa12.68□□□□□ -0.38
NEK6-212ENST00000539416 LSAMPQ13449 338 aa12.68□□□□□ -0.38
NEK6-212ENST00000539416 GRM4Q14833 912 aa12.68□□□□□ -0.38
NEK6-212ENST00000539416 TAF1BQ53T94 588 aaPredicted RBP12.68□□□□□ -0.38
NEK6-212ENST00000539416 CCDC137Q6PK04 289 aaKnown RBP12.68□□□□□ -0.38
NEK6-212ENST00000539416 KRT35Q92764 455 aa12.68□□□□□ -0.38
NEK6-212ENST00000539416 CDK5RAP3Q96JB5 506 aa12.68□□□□□ -0.38
NEK6-212ENST00000539416 TUBGCP5Q96RT8 1024 aa12.68□□□□□ -0.38
NEK6-212ENST00000539416 TLE6Q9H808 572 aa12.68□□□□□ -0.38
NEK6-212ENST00000539416 KRT82Q9NSB4 513 aa12.68□□□□□ -0.38
NEK6-212ENST00000539416 IQCA1LA6NCM1 817 aa12.68□□□□□ -0.38
NEK6-212ENST00000539416 POTEMA6NI47 508 aa12.68□□□□□ -0.38
NEK6-212ENST00000539416 ALAS1P13196 640 aa12.68□□□□□ -0.38
NEK6-212ENST00000539416 MARSP56192 900 aaKnown RBP12.68□□□□□ -0.38
NEK6-212ENST00000539416 DAGLBQ8NCG7 672 aa12.68□□□□□ -0.38
NEK6-212ENST00000539416 DNAJC19Q96DA6 116 aa12.68□□□□□ -0.38
NEK6-212ENST00000539416 RUNDC3BQ96NL0 473 aa12.68□□□□□ -0.38
NEK6-212ENST00000539416 NKIRAS1Q9NYS0 192 aa12.68□□□□□ -0.38
NEK6-212ENST00000539416 STK17AQ9UEE5 414 aa12.68□□□□□ -0.38
NEK6-212ENST00000539416 PARP2Q9UGN5 583 aa12.68□□□□□ -0.38
NEK6-212ENST00000539416 TMCO1Q9UM00 188 aa12.68□□□□□ -0.38
NEK6-212ENST00000539416 SYNPO2Q9UMS6 1093 aa12.68□□□□□ -0.38
NEK6-212ENST00000539416 STX8Q9UNK0 236 aa12.68□□□□□ -0.38
NEK6-212ENST00000539416 POTECB2RU33 542 aa12.67□□□□□ -0.38
NEK6-212ENST00000539416 TRAFD1O14545 582 aaPredicted RBP12.67□□□□□ -0.38
NEK6-212ENST00000539416 TP73O15350 636 aa12.67□□□□□ -0.38
NEK6-212ENST00000539416 GFPT2O94808 682 aa12.67□□□□□ -0.38
NEK6-212ENST00000539416 CHRNA3P32297 505 aa12.67□□□□□ -0.38
NEK6-212ENST00000539416 JAG1P78504 1218 aa12.67□□□□□ -0.38
NEK6-212ENST00000539416 CACNB1Q02641 598 aaPredicted RBP12.67□□□□□ -0.38
NEK6-212ENST00000539416 SLC34A1Q06495 639 aa12.67□□□□□ -0.38
NEK6-212ENST00000539416 STRN3Q13033 797 aa12.67□□□□□ -0.38
NEK6-212ENST00000539416 ECM1Q16610 540 aa12.67□□□□□ -0.38
NEK6-212ENST00000539416 FAM26FQ5R3K3 315 aa12.67□□□□□ -0.38
NEK6-212ENST00000539416 DCAF15Q66K64 600 aa12.67□□□□□ -0.38
NEK6-212ENST00000539416 ARHGEF18Q6ZSZ5 1173 aa12.67□□□□□ -0.38
NEK6-212ENST00000539416 PRUNE1Q86TP1 453 aa12.67□□□□□ -0.38
NEK6-212ENST00000539416 GLYCTKQ8IVS8 523 aa12.67□□□□□ -0.38
NEK6-212ENST00000539416 CPVLQ9H3G5 476 aa12.67□□□□□ -0.38
NEK6-212ENST00000539416 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.67□□□□□ -0.387e-7■■■■■ 33.1
NEK6-212ENST00000539416 PCYOX1Q9UHG3 505 aa12.67□□□□□ -0.38
NEK6-212ENST00000539416 DIS3Q9Y2L1 958 aaKnown RBP12.67□□□□□ -0.38
NEK6-212ENST00000539416 STARD13Q9Y3M8 1113 aa12.67□□□□□ -0.38
NEK6-212ENST00000539416 WASF2Q9Y6W5 498 aa12.67□□□□□ -0.38
NEK6-212ENST00000539416 ATAD5Q96QE3 1844 aa12.67□□□□□ -0.38
NEK6-212ENST00000539416 PODXLO00592 558 aa12.67□□□□□ -0.38
NEK6-212ENST00000539416 HNRNPRO43390 633 aaKnown RBP12.67□□□□□ -0.38
NEK6-212ENST00000539416 ABCD1P33897 745 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms