RNA–Protein interactions for RNA: ENST00000538297.1

AC087235.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC087235.1, Length 1,329 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087235.1-201ENST00000538297 EXOC3O60645 756 aa12□□□□□ -0.49
AC087235.1-201ENST00000538297 GNA14O95837 355 aa12□□□□□ -0.49
AC087235.1-201ENST00000538297 NR3C1P04150 777 aa12□□□□□ -0.49
AC087235.1-201ENST00000538297 RB1P06400 928 aa12□□□□□ -0.49
AC087235.1-201ENST00000538297 CCDC192P0DO97 292 aa12□□□□□ -0.49
AC087235.1-201ENST00000538297 BMP6P22004 513 aa12□□□□□ -0.49
AC087235.1-201ENST00000538297 PSMC2P35998 433 aaKnown RBP12□□□□□ -0.49
AC087235.1-201ENST00000538297 AP3M2P53677 418 aa12□□□□□ -0.49
AC087235.1-201ENST00000538297 RNASELQ05823 741 aaKnown RBP12□□□□□ -0.49
AC087235.1-201ENST00000538297 PPP2R3AQ06190 1150 aa12□□□□□ -0.49
AC087235.1-201ENST00000538297 PAK1Q13153 545 aa12□□□□□ -0.49
AC087235.1-201ENST00000538297 ADAM9Q13443 819 aa12□□□□□ -0.49
AC087235.1-201ENST00000538297 SLC10A6Q3KNW5 377 aa12□□□□□ -0.49
AC087235.1-201ENST00000538297 CLLU1OSQ5K130 101 aa12□□□□□ -0.49
AC087235.1-201ENST00000538297 FAM109BQ6ICB4 259 aaPredicted RBP12□□□□□ -0.49
AC087235.1-201ENST00000538297 CAVIN1Q6NZI2 390 aaKnown RBP12□□□□□ -0.49
AC087235.1-201ENST00000538297 CDR2LQ86X02 465 aaPredicted RBP12□□□□□ -0.49
AC087235.1-201ENST00000538297 CACTINQ8WUQ7 758 aaKnown RBP12□□□□□ -0.49
AC087235.1-201ENST00000538297 ERCC4Q92889 916 aaPredicted RBP12□□□□□ -0.49
AC087235.1-201ENST00000538297 CEP63Q96MT8 703 aa12□□□□□ -0.49
AC087235.1-201ENST00000538297 UROC1Q96N76 676 aa12□□□□□ -0.49
AC087235.1-201ENST00000538297 FAM193BQ96PV7 902 aaPredicted RBP12□□□□□ -0.49
AC087235.1-201ENST00000538297 TMEM175Q9BSA9 504 aa12□□□□□ -0.49
AC087235.1-201ENST00000538297 SLC28A3Q9HAS3 691 aa12□□□□□ -0.49
AC087235.1-201ENST00000538297 TMEM63CQ9P1W3 806 aa12□□□□□ -0.49
AC087235.1-201ENST00000538297 MAPK8IP1Q9UQF2 711 aa12□□□□□ -0.49
AC087235.1-201ENST00000538297 USP20Q9Y2K6 914 aa12□□□□□ -0.49
AC087235.1-201ENST00000538297 TBKBP1A7MCY6 615 aa11.99□□□□□ -0.49
AC087235.1-201ENST00000538297 BIN1O00499 593 aa11.99□□□□□ -0.49
AC087235.1-201ENST00000538297 DPYSL4O14531 572 aa11.99□□□□□ -0.49
AC087235.1-201ENST00000538297 IKBKBO14920 756 aa11.99□□□□□ -0.49
AC087235.1-201ENST00000538297 ALDH2P05091 517 aa11.99□□□□□ -0.49
AC087235.1-201ENST00000538297 LAG3P18627 525 aa11.99□□□□□ -0.49
AC087235.1-201ENST00000538297 NR2F2P24468 414 aa11.99□□□□□ -0.49
AC087235.1-201ENST00000538297 RPL9P32969 192 aaKnown RBP11.99□□□□□ -0.49
AC087235.1-201ENST00000538297 PPM1AP35813 382 aa11.99□□□□□ -0.49
AC087235.1-201ENST00000538297 ALDH7A1P49419 539 aaKnown RBP11.99□□□□□ -0.49
AC087235.1-201ENST00000538297 ENOX2Q16206 610 aaKnown RBP11.99□□□□□ -0.49
AC087235.1-201ENST00000538297 SNRNP35Q16560 246 aaKnown RBP11.99□□□□□ -0.49
AC087235.1-201ENST00000538297 STX1AQ16623 288 aa11.99□□□□□ -0.49
AC087235.1-201ENST00000538297 INTS8Q75QN2 995 aaKnown RBP11.99□□□□□ -0.49
AC087235.1-201ENST00000538297 PACS2Q86VP3 889 aa11.99□□□□□ -0.49
AC087235.1-201ENST00000538297 ZC3H3Q8IXZ2 948 aaKnown RBP11.99□□□□□ -0.49
AC087235.1-201ENST00000538297 HELQQ8TDG4 1101 aa11.99□□□□□ -0.49
AC087235.1-201ENST00000538297 SNX27Q96L92 541 aa11.99□□□□□ -0.49
AC087235.1-201ENST00000538297 MFSD14AQ96MC6 490 aa11.99□□□□□ -0.49
AC087235.1-201ENST00000538297 GAD1Q99259 594 aa11.99□□□□□ -0.49
AC087235.1-201ENST00000538297 CBWD1Q9BRT8 395 aa11.99□□□□□ -0.49
AC087235.1-201ENST00000538297 FAM213AQ9BRX8 229 aa11.99□□□□□ -0.49
AC087235.1-201ENST00000538297 HAPLN2Q9GZV7 340 aa11.99□□□□□ -0.49
AC087235.1-201ENST00000538297 SEMA6BQ9H3T3 888 aa11.99□□□□□ -0.49
AC087235.1-201ENST00000538297 METTL14Q9HCE5 456 aaKnown RBP11.99□□□□□ -0.49
AC087235.1-201ENST00000538297 RNF19AQ9NV58 838 aa11.99□□□□□ -0.49
AC087235.1-201ENST00000538297 HES2Q9Y543 173 aa11.99□□□□□ -0.49
AC087235.1-201ENST00000538297 PCDHB12Q9Y5F1 795 aa11.99□□□□□ -0.49
AC087235.1-201ENST00000538297 SMIM28A0A1B0GU29 152 aa11.98□□□□□ -0.49
AC087235.1-201ENST00000538297 SLC16A3O15427 465 aaKnown RBP11.98□□□□□ -0.49
AC087235.1-201ENST00000538297 FGFR1P11362 822 aa11.98□□□□□ -0.49
AC087235.1-201ENST00000538297 AKAP5P24588 427 aa11.98□□□□□ -0.49
AC087235.1-201ENST00000538297 MLH1P40692 756 aa11.98□□□□□ -0.49
AC087235.1-201ENST00000538297 ACOT2P49753 483 aa11.98□□□□□ -0.49
AC087235.1-201ENST00000538297 DSC1Q08554 894 aa11.98□□□□□ -0.49
AC087235.1-201ENST00000538297 ZBTB6Q15916 424 aa11.98□□□□□ -0.49
AC087235.1-201ENST00000538297 ISM2Q6H9L7 571 aa11.98□□□□□ -0.49
AC087235.1-201ENST00000538297 CRELD2Q6UXH1 353 aaPredicted RBP11.98□□□□□ -0.49
AC087235.1-201ENST00000538297 FILIP1Q7Z7B0 1213 aa11.98□□□□□ -0.49
AC087235.1-201ENST00000538297 BRSK2Q8IWQ3 736 aa11.98□□□□□ -0.49
AC087235.1-201ENST00000538297 SMYD4Q8IYR2 804 aaPredicted RBP11.98□□□□□ -0.49
AC087235.1-201ENST00000538297 GSTCDQ8NEC7 633 aa11.98□□□□□ -0.49
AC087235.1-201ENST00000538297 NOC3LQ8WTT2 800 aaKnown RBP11.98□□□□□ -0.49
AC087235.1-201ENST00000538297 NELFBQ8WX92 580 aa11.98□□□□□ -0.49
AC087235.1-201ENST00000538297 LPPQ93052 612 aa11.98□□□□□ -0.49
AC087235.1-201ENST00000538297 TGS1Q96RS0 853 aaKnown RBP11.98□□□□□ -0.49
AC087235.1-201ENST00000538297 PBX4Q9BYU1 374 aa11.98□□□□□ -0.49
AC087235.1-201ENST00000538297 TBC1D13Q9NVG8 400 aa11.98□□□□□ -0.49
AC087235.1-201ENST00000538297 RBAKQ9NYW8 714 aaPredicted RBP11.98□□□□□ -0.49
AC087235.1-201ENST00000538297 UBQLN1Q9UMX0 589 aaKnown RBP11.98□□□□□ -0.49
AC087235.1-201ENST00000538297 CITO14578 2027 aa11.98□□□□□ -0.49
AC087235.1-201ENST00000538297 TISP43B9A030 160 aa11.97□□□□□ -0.49
AC087235.1-201ENST00000538297 C5orf67F2Z3F1 127 aa11.97□□□□□ -0.49
AC087235.1-201ENST00000538297 CLIC2O15247 247 aa11.97□□□□□ -0.49
AC087235.1-201ENST00000538297 STX10O60499 249 aa11.97□□□□□ -0.49
AC087235.1-201ENST00000538297 EPB41P11171 864 aaKnown RBP11.97□□□□□ -0.49
AC087235.1-201ENST00000538297 HARSP12081 509 aaKnown RBP11.97□□□□□ -0.49
AC087235.1-201ENST00000538297 KRT13P13646 458 aa11.97□□□□□ -0.49
AC087235.1-201ENST00000538297 DNAJB2P25686 324 aa11.97□□□□□ -0.49
AC087235.1-201ENST00000538297 BMPR1AP36894 532 aa11.97□□□□□ -0.49
AC087235.1-201ENST00000538297 CYP2J2P51589 502 aa11.97□□□□□ -0.49
AC087235.1-201ENST00000538297 OSTNP61366 133 aa11.97□□□□□ -0.49
AC087235.1-201ENST00000538297 ERVK-21P61565 698 aa11.97□□□□□ -0.49
AC087235.1-201ENST00000538297 CLDN10P78369 228 aa11.97□□□□□ -0.49
AC087235.1-201ENST00000538297 UBE3AQ05086 875 aa11.97□□□□□ -0.49
AC087235.1-201ENST00000538297 TUSC3Q13454 348 aa11.97□□□□□ -0.49
AC087235.1-201ENST00000538297 PSMD6Q15008 389 aa11.97□□□□□ -0.49
AC087235.1-201ENST00000538297 DUOXA2Q1HG44 320 aa11.97□□□□□ -0.49
AC087235.1-201ENST00000538297 TJAP1Q5JTD0 557 aa11.97□□□□□ -0.49
AC087235.1-201ENST00000538297 ANKRD40Q6AI12 368 aa11.97□□□□□ -0.49
AC087235.1-201ENST00000538297 TTI2Q6NXR4 508 aa11.97□□□□□ -0.49
AC087235.1-201ENST00000538297 FAM117BQ6P1L5 589 aa11.97□□□□□ -0.49
AC087235.1-201ENST00000538297 FRMD5Q7Z6J6 570 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms