RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 ACAP3Q96P50 834 aa9.19□□□□□ -0.94
SPARC-208ENST00000538026 RPS6KC1Q96S38 1066 aa9.19□□□□□ -0.94
SPARC-208ENST00000538026 C7orf25Q9BPX7 421 aa9.19□□□□□ -0.94
SPARC-208ENST00000538026 TCHPQ9BT92 498 aa9.19□□□□□ -0.94
SPARC-208ENST00000538026 COLEC11Q9BWP8 271 aa9.19□□□□□ -0.94
SPARC-208ENST00000538026 GDPD2Q9HCC8 539 aa9.19□□□□□ -0.94
SPARC-208ENST00000538026 CNTN3Q9P232 1028 aa9.19□□□□□ -0.94
SPARC-208ENST00000538026 TUBGCP4Q9UGJ1 667 aa9.19□□□□□ -0.94
SPARC-208ENST00000538026 KCNG1Q9UIX4 513 aa9.19□□□□□ -0.94
SPARC-208ENST00000538026 ADAM28Q9UKQ2 775 aa9.19□□□□□ -0.94
SPARC-208ENST00000538026 FRYLO94915 3013 aa9.18□□□□□ -0.94
SPARC-208ENST00000538026 A0A1B0GVL5 298 aa9.18□□□□□ -0.94
SPARC-208ENST00000538026 C19orf67A6NJJ6 358 aa9.18□□□□□ -0.94
SPARC-208ENST00000538026 LACTBL1A8MY62 500 aa9.18□□□□□ -0.94
SPARC-208ENST00000538026 I3L4J1 428 aa9.18□□□□□ -0.94
SPARC-208ENST00000538026 C2CD2LO14523 706 aa9.18□□□□□ -0.94
SPARC-208ENST00000538026 CLDN3O15551 220 aa9.18□□□□□ -0.94
SPARC-208ENST00000538026 TBCAO75347 108 aaKnown RBP9.18□□□□□ -0.94
SPARC-208ENST00000538026 PRPF6O94906 941 aaKnown RBP9.18□□□□□ -0.94
SPARC-208ENST00000538026 RPL17P18621 184 aaKnown RBP9.18□□□□□ -0.94
SPARC-208ENST00000538026 CMA1P23946 247 aa9.18□□□□□ -0.94
SPARC-208ENST00000538026 TXLNAP40222 546 aa9.18□□□□□ -0.94
SPARC-208ENST00000538026 ME1P48163 572 aa9.18□□□□□ -0.94
SPARC-208ENST00000538026 NDUFV1P49821 464 aa9.18□□□□□ -0.94
SPARC-208ENST00000538026 CLCN4P51793 760 aa9.18□□□□□ -0.94
SPARC-208ENST00000538026 ZP2Q05996 745 aa9.18□□□□□ -0.94
SPARC-208ENST00000538026 STRN3Q13033 797 aa9.18□□□□□ -0.94
SPARC-208ENST00000538026 SMAD4Q13485 552 aaKnown RBP9.18□□□□□ -0.94
SPARC-208ENST00000538026 CUL4BQ13620 913 aa9.18□□□□□ -0.94
SPARC-208ENST00000538026 AAK1Q2M2I8 961 aa9.18□□□□□ -0.94
SPARC-208ENST00000538026 HERC4Q5GLZ8 1057 aaPredicted RBP9.18□□□□□ -0.94
SPARC-208ENST00000538026 ADALQ6DHV7 355 aa9.18□□□□□ -0.94
SPARC-208ENST00000538026 LILRA6Q6PI73 481 aa9.18□□□□□ -0.94
SPARC-208ENST00000538026 PRSS55Q6UWB4 352 aaPredicted RBP9.18□□□□□ -0.94
SPARC-208ENST00000538026 EPM2AIP1Q7L775 607 aaPredicted RBP9.18□□□□□ -0.94
SPARC-208ENST00000538026 LNX1Q8TBB1 728 aaPredicted RBP9.18□□□□□ -0.94
SPARC-208ENST00000538026 CDCA3Q99618 268 aaPredicted RBP9.18□□□□□ -0.94
SPARC-208ENST00000538026 CLSTN3Q9BQT9 956 aa9.18□□□□□ -0.94
SPARC-208ENST00000538026 APOL5Q9BWW9 433 aa9.18□□□□□ -0.94
SPARC-208ENST00000538026 BLZF1Q9H2G9 400 aa9.18□□□□□ -0.94
SPARC-208ENST00000538026 TNMDQ9H2S6 317 aa9.18□□□□□ -0.94
SPARC-208ENST00000538026 GOLPH3LQ9H4A5 285 aa9.18□□□□□ -0.94
SPARC-208ENST00000538026 ZDBF2Q9HCK1 2354 aa9.18□□□□□ -0.94
SPARC-208ENST00000538026 OLFML3Q9NRN5 406 aa9.18□□□□□ -0.94
SPARC-208ENST00000538026 PANK4Q9NVE7 773 aa9.18□□□□□ -0.94
SPARC-208ENST00000538026 SERTAD1Q9UHV2 236 aa9.18□□□□□ -0.94
SPARC-208ENST00000538026 CD207Q9UJ71 328 aa9.18□□□□□ -0.94
SPARC-208ENST00000538026 CPSF3Q9UKF6 684 aaKnown RBP9.18□□□□□ -0.94
SPARC-208ENST00000538026 CFAP45Q9UL16 551 aa9.18□□□□□ -0.94
SPARC-208ENST00000538026 KCNH3Q9ULD8 1083 aa9.18□□□□□ -0.94
SPARC-208ENST00000538026 USP15Q9Y4E8 981 aaPredicted RBP9.18□□□□□ -0.94
SPARC-208ENST00000538026 TMEM189-UBE2V1I3L0A0 370 aa9.17□□□□□ -0.94
SPARC-208ENST00000538026 PPEF2O14830 753 aa9.17□□□□□ -0.94
SPARC-208ENST00000538026 HNRNPDLO14979 420 aaKnown RBP9.17□□□□□ -0.94
SPARC-208ENST00000538026 OGTO15294 1046 aa9.17□□□□□ -0.94
SPARC-208ENST00000538026 TADA2AO75478 443 aa9.17□□□□□ -0.94
SPARC-208ENST00000538026 CLTAP09496 248 aa9.17□□□□□ -0.94
SPARC-208ENST00000538026 WEE2P0C1S8 567 aa9.17□□□□□ -0.94
SPARC-208ENST00000538026 IDEP14735 1019 aa9.17□□□□□ -0.94
SPARC-208ENST00000538026 PFKFB1P16118 471 aa9.17□□□□□ -0.94
SPARC-208ENST00000538026 GAP43P17677 238 aa9.17□□□□□ -0.94
SPARC-208ENST00000538026 FGFR3P22607 806 aa9.17□□□□□ -0.94
SPARC-208ENST00000538026 BRCC3P46736 316 aa9.17□□□□□ -0.94
SPARC-208ENST00000538026 ACOT2P49753 483 aa9.17□□□□□ -0.94
SPARC-208ENST00000538026 LIG4P49917 911 aa9.17□□□□□ -0.94
SPARC-208ENST00000538026 NDUFA8P51970 172 aa9.17□□□□□ -0.94
SPARC-208ENST00000538026 L1TD1Q5T7N2 865 aaKnown RBP9.17□□□□□ -0.94
SPARC-208ENST00000538026 FAM171A1Q5VUB5 890 aa9.17□□□□□ -0.94
SPARC-208ENST00000538026 DCLRE1AQ6PJP8 1040 aa9.17□□□□□ -0.94
SPARC-208ENST00000538026 IQUBQ8NA54 791 aa9.17□□□□□ -0.94
SPARC-208ENST00000538026 PAGE5Q96GU1 130 aa9.17□□□□□ -0.94
SPARC-208ENST00000538026 CCDC94Q9BW85 323 aaPredicted RBP9.17□□□□□ -0.94
SPARC-208ENST00000538026 CUEDC2Q9H467 287 aa9.17□□□□□ -0.94
SPARC-208ENST00000538026 MRPL44Q9H9J2 332 aaKnown RBP9.17□□□□□ -0.94
SPARC-208ENST00000538026 SEL1LQ9UBV2 794 aa9.17□□□□□ -0.94
SPARC-208ENST00000538026 DENND4AQ7Z401 1863 aa9.17□□□□□ -0.94
SPARC-208ENST00000538026 H0YCG3 227 aa9.16□□□□□ -0.94
SPARC-208ENST00000538026 SPTLC1O15269 473 aa9.16□□□□□ -0.94
SPARC-208ENST00000538026 TGFB1I1O43294 461 aa9.16□□□□□ -0.94
SPARC-208ENST00000538026 TBC1D4O60343 1298 aa9.16□□□□□ -0.94
SPARC-208ENST00000538026 B3GAT3O94766 335 aa9.16□□□□□ -0.94
SPARC-208ENST00000538026 PAPLNO95428 1278 aa9.16□□□□□ -0.94
SPARC-208ENST00000538026 NFICP08651 508 aa9.16□□□□□ -0.94
SPARC-208ENST00000538026 SLFN14P0C7P3 912 aa9.16□□□□□ -0.94
SPARC-208ENST00000538026 PRR29P0C7W0 189 aa9.16□□□□□ -0.94
SPARC-208ENST00000538026 SPATA31D3P0C874 917 aa9.16□□□□□ -0.94
SPARC-208ENST00000538026 TKTP29401 623 aaKnown RBP9.16□□□□□ -0.94
SPARC-208ENST00000538026 AFMP43652 599 aa9.16□□□□□ -0.94
SPARC-208ENST00000538026 GLUD2P49448 558 aa9.16□□□□□ -0.94
SPARC-208ENST00000538026 MRPL58Q14197 206 aaKnown RBP9.16□□□□□ -0.94
SPARC-208ENST00000538026 USP41Q3LFD5 358 aa9.16□□□□□ -0.94
SPARC-208ENST00000538026 SPATA31D4Q6ZUB0 917 aa9.16□□□□□ -0.94
SPARC-208ENST00000538026 EFCAB13Q8IY85 973 aa9.16□□□□□ -0.94
SPARC-208ENST00000538026 CXorf38Q8TB03 319 aa9.16□□□□□ -0.94
SPARC-208ENST00000538026 ZNF507Q8TCN5 953 aa9.16□□□□□ -0.94
SPARC-208ENST00000538026 SCFD1Q8WVM8 642 aa9.16□□□□□ -0.94
SPARC-208ENST00000538026 RIN2Q8WYP3 895 aaPredicted RBP9.16□□□□□ -0.94
SPARC-208ENST00000538026 PPP2R3CQ969Q6 453 aa9.16□□□□□ -0.94
SPARC-208ENST00000538026 BICD1Q96G01 975 aa9.16□□□□□ -0.94
SPARC-208ENST00000538026 SPATA32Q96LK8 384 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms